Cited by 7Epilepsy research and treatmentGenetics and Neurodevelopmental DisordersGenomics and Rare Diseases

The clinical and genetic landscape of developmental and epileptic encephalopathies in Egyptian children

Open access
Elkhateeb, Nour, Issa, Mahmoud Y., Elbendary, Hasnaa M., Elnaggar, Walaa, Ramadan, Areef, Rafat, Karima, Kamel, Mona, Abdel‐Ghafar, Sherif F. +12 more·2024·Clinical Genetics

Abstract

Developmental and epileptic encephalopathies (DEEs) are a heterogeneous group of epilepsies characterized by early‐onset, refractory seizures associated with developmental regression or impairment, with a heterogeneous genetic landscape including genes implicated in various pathways and mechanisms. We retrospectively studied the clinical and genetic data of patients with genetic DEE who presented at two tertiary centers in Egypt over a 10‐year period. Exome sequencing was used for genetic testing. We report 74 patients from 63 unrelated Egyptian families, with a high rate of consanguinity (58%). The most common seizure type was generalized tonic–clonic (58%) and multiple seizure types were common (55%). The most common epilepsy syndrome was early infantile DEE (50%). All patients showed variable degrees of developmental impairment. Microcephaly, hypotonia, ophthalmological involvement and neuroimaging abnormalities were common. Eighteen novel variants were identified and the phenotypes of five DEE genes were expanded with novel phenotype–genotype associations. Obtaining a genetic diagnosis had implications on epilepsy management in 17 patients with variants in 12 genes. In this study, we expand the phenotype and genotype spectrum of DEE in a large single ethnic cohort of patients. Reaching a genetic diagnosis guided precision management of epilepsy in a significant proportion of patients.

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1111/cge.14481

Cites

59 of 59 references verified0 citation errors · 0 not checkable

Statistics

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

  • Recessive causes occur more frequently in populations with high rates of consanguinity.

    “whereas, recessive causes occur more frequently in populations with high rates of consanguinity 14 .”

    From Developmental and epileptic encephalopathies (2024) · cites this paper as [14]

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Cites

Flagged first, then by citations

Research works printed but not linked: 7

  1. [3]3. McTague A, Howell KB, Cross JH, Kurian MA, Scheffer IE. The genetic landscape of the epileptic encephalopathies of infancy and childhood. Lancet Neurol. 2016;15:304-316. doi:10.1016/S1474- 4422(15)00250-1 · DOI
  2. [8]8. Striano P, Minassian BA. From genetic testing to precision medicine in epilepsy. Neurotherapeutics. 2020;17:609-615. doi:10.1007/s13311- 020-00835-4 · DOI
  3. [17]17. Riggs ER, Andersen EF, Cherry AM, et al. Technical standards for the interpretation and reporting of constitutional copy-number variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics (ACMG) and the Clinical Genome Resource (ClinGen). Genet Med. 2020;22:245-257. doi:10.1038/s41436-019- 0686-8 · DOI
  4. [22]22. D'Gama AM, Mulhern S, Sheidley BR, et al. Evaluation of the feasibil- ity, diagnostic yield, and clinical utility of rapid genome sequencing in infantile epilepsy (Gene-STEPS): an international, multicentre, pilot cohort study. Lancet Neurol. 2023;22:812-825. doi:10.1016/S1474- 4422(23)00246-6 · DOI
  5. [46]46. Leonard H, Downs J, Benke TA, Swanson L, Olson H, Demarest S. CDKL5 deficiency disorder: clinical features, diagnosis, and manage- ment. Lancet Neurol. 2022;21:563-576. doi:10.1016/S1474-4422(22) 00035-7 · DOI
  6. [53]53. Brock S, Laquerriere A, Marguet F, et al. Overlapping cortical malformations in patients with pathogenic variants in GRIN1 and GRIN2B. J Med Genet. 2023;60:183-192. doi:10.1136/jmedgenet- 2021-107971 · DOI
  7. [54]54. Platzer K, Yuan H, Schütz H, et al. GRIN2B encephalopathy: novel findings on phenotype, variant clustering, functional consequences and treatment aspects. J Med Genet. 2017;54:460-470. doi:10.1136/ jmedgenet-2016-104509

Cited by

Sorted by citations

Authors
Elkhateeb, N., Issa, M. Y., Elbendary, H. M., Elnaggar, W., Ramadan, A., Rafat, K., Kamel, M., Abdel‐Ghafar, S. F., Amer, F., Hassaan, H. M., Trunzo, R., Pereira, C., Abdel‐Hamid, M. S., D'Arco, F., Bauer, P., Bertoli‐Avella, A. M., Girgis, M., Gleeson, J. G., Zaki, M. S., & Selim, L.
Affiliations
  • Cairo University (EG)
  • National Research Centre (EG)
  • Centogene (Germany) (DE)
  • Radiology Department Great Ormond Street Hospital for Children London UK
  • University of California San Diego (US)
Corresponding author
Elkhateeb, Nour
Venue
Clinical Genetics
Publisher
Wiley
Published
2024-01-14
Volume
105
Issue
5
Pages
510-522
ISSN
  • 0009-9163 (ISSN-L)
  • 1399-0004
OpenAlex
W4390883154
Cited by
7
References
59
Citations by year
2026: 1 · 2025: 3 · 2024: 3
FWCI
2.05
Type
journal article
Language
en
Open access
Locations
  • Clinical Genetics (publishedVersion)
  • PubMed (publishedVersion)
Topics
  • Health Sciences › Medicine › Psychiatry and Mental health › Epilepsy research and treatment
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetics and Neurodevelopmental Disorders
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genomics and Rare Diseases
Keywords
developmental and epileptic encephalopathy, genetic diagnosis, consanguinity, novel variants, genotype-phenotype correlation, generalized tonic-clonic seizures, developmental regression, microcephaly, hypotonia, neuroimaging abnormalities, Egyptian children, epilepsy management
MeSH terms
Child, Egypt, Epilepsy, Epilepsy, Generalized, Humans, Phenotype, Retrospective Studies, Seizures

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review