The DOI matches its Crossref record; 38 of the 38 references it cites were found in a registry or an index.
Genome‐wide expression profiling of the host response to root‐knot nematode infection in Arabidopsisa
Open accessAbstract
Summary: During a compatible interaction, root‐knot nematodes (Meloidogyne spp.) induce the redifferentiation of root cells into multinucleate nematode feeding cells (giant cells). Hyperplasia and hypertrophy of the surrounding cells leads to the formation of a root gall. We investigated the plant response to root‐knot nematodes by carrying out a global analysis of gene expression during gall formation in Arabidopsis, using giant cell‐enriched root tissues. Among 22 089 genes monitored with the complete Arabidopsis transcriptome microarray gene‐specific tag, we identified 3373 genes that display significant differential expression between uninfected root tissues and galls at different developmental stages. Quantitative PCR analysis and the use of promoter GUS fusions confirmed the changes in mRNA levels observed in our microarray analysis. We showed that a comparable number of genes were found to be up‐ and downregulated, indicating that gene downregulation might be essential to allow proper gall formation. Moreover, many genes belonging to the same family are differently regulated in feeding cells. This genome‐wide overview of gene expression during plant–nematode interaction provides new insights into nematode feeding‐cell formation, and highlights that the suppression of plant defence is associated with nematode feeding‐site development.
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Cites
Floral dip: a simplified method forAgrobacterium‐mediated transformation ofArabidopsis thaliana
Clough, S. J., & Bent, A. F. (1998) · The Plant Journal · doi:10.1046/j.1365-313x.1998.00343.x · Cited by 21,934
Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
Initiative, T. A. G. (2000) · Nature · doi:10.1038/35048692 · Cited by 9,301
GATEWAY™ vectors for Agrobacterium-mediated plant transformation
Karimi, M., Inzé, D., & Depicker, A. (2002) · Trends in Plant Science · doi:10.1016/s1360-1385(02)02251-3 · Cited by 3,635
Yang, Y. H. (2002) · Nucleic Acids Research · doi:10.1093/nar/30.4.e15 · Cited by 3,464
In planta Agrobacterium mediated gene transfer by infiltration of adult Arabidopsis thaliana plants
Bechtold, N., Baquero, M., Bonhomme, S., Ferault, M., Horlow, C., Laroche, L., Migdal, M., Mollier, P., Montoro, P., Roux, D., et al. (1993) · HAL · Cited by 1,774
Lurin, C., Andreés, C., Aubourg, S., Bellaoui, M., Bitton, F., Bruyère, C., Caboche, M., Debast, C., Gualberto, J., Hoffmann, B., et al. (2004) · The Plant Cell · doi:10.1105/tpc.104.022236 · Cited by 1,306
Self-citationBoyes, D. C., Zayed, A. M., Ascenzi, R., McCaskill, A. J., Hoffman, N. E., Davis, K. R., & Görlach, J. (2001) · The Plant Cell · doi:10.1105/tpc.010011 · Cited by 1,266
Ruepp, A. (2004) · Nucleic Acids Research · doi:10.1093/nar/gkh894 · Cited by 1,133
Chen, W., Provart, N. J., Glazebrook, J., Katagiri, F., Chang, H.-S., Eulgem, T., Mauch, F., Luan, S., Zou, G., Whitham, S. A., et al. (2002) · The Plant Cell · doi:10.1105/tpc.010410 · Cited by 968
Boyes, D. C. (2001) · THE PLANT CELL ONLINE · doi:10.1105/tpc.13.7.1499 · Cited by 827
Cited by
Nahar, K., Kyndt, T., De Vleesschauwer, D., Höfte, M., & Gheysen, G. (2011) · Plant Physiology · doi:10.1104/pp.111.177576 · Cited by 388
Merlot, S., Leonhardt, N., Fenzi, F., Valon, C., Costa, M., Piette, L., Vavasseur, A., Genty, B., Boivin, K., Müller, A., et al. (2007) · The EMBO Journal · doi:10.1038/sj.emboj.7601750 · Cited by 353
Lionetti, V., Cervone, F., & Bellincampi, D. (2012) · Journal of Plant Physiology · doi:10.1016/j.jplph.2012.05.006 · Cited by 283
Metadata
- Authors
- Jammes, F., Lecomte, P., de Almeida‐Engler, J., Bitton, F., Martin‐Magniette, M., Renou, J. P., Abad, P., & Favery, B.
- Venue
- The Plant Journal
- Publisher
- Wiley
- Published
- 2005-10-07
- Volume
- 44
- Issue
- 3
- Pages
- 447-458
- ISSN
- 0960-7412 (ISSN-L)
- 1365-313X
- OpenAlex
- W2162145176
- Cited by
- 295
- References
- 38
- FWCI
- 20.65
- Type
- journal article
- Language
- en
- Open access
- bronze
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- CoChat. (2026). Citation check: Genome‐wide expression profiling of the host response to root‐knot nematode infection in Arabidopsisa. https://app.cochat.ai/papers/10.1111/j.1365-313x.2005.02532.x
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- Jammes, F., Lecomte, P., de Almeida‐Engler, J., Bitton, F., Martin‐Magniette, M., Renou, J. P., Abad, P., & Favery, B. (2005). Genome‐wide expression profiling of the host response to root‐knot nematode infection in Arabidopsisa. The Plant Journal. https://doi.org/10.1111/j.1365-313x.2005.02532.x
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Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
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