The DOI matches its Crossref record; 2 of the 2 references it cites were found in a registry or an index.
Plant host and soil origin influence fungal and bacterial assemblages in the roots of woody plants
Abstract
Microbial communities in plant roots provide critical links between above‐ and belowground processes in terrestrial ecosystems. Variation in root communities has been attributed to plant host effects and microbial host preferences, as well as to factors pertaining to soil conditions, microbial biogeography and the presence of viable microbial propagules. To address hypotheses regarding the influence of plant host and soil biogeography on root fungal and bacterial communities, we designed a trap‐plant bioassay experiment. Replicate Populus, Quercus and Pinus plants were grown in three soils originating from alternate field sites. Fungal and bacterial community profiles in the root of each replicate were assessed through multiplex 454 amplicon sequencing of four loci (i.e., 16S, SSU, ITS, LSU rDNA). Soil origin had a larger effect on fungal community composition than did host species, but the opposite was true for bacterial communities. Populus hosted the highest diversity of rhizospheric fungi and bacteria. Root communities on Quercus and Pinus were more similar to each other than to Populus. Overall, fungal root symbionts appear to be more constrained by dispersal and biogeography than by host availability.
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Citations
Cites
QIIME allows analysis of high-throughput community sequencing data
Caporaso, J. G., Kuczynski, J., Stombaugh, J., Bittinger, K., Bushman, F. D., Costello, E. K., Fierer, N., Peña, A. G., Goodrich, J. K., Gordon, J. I., et al. (2010) · Nature Methods · doi:10.1038/nmeth.f.303 · Cited by 34,887
The diversity and biogeography of soil bacterial communities
Fierer, N., & Jackson, R. B. (2006) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0507535103 · Cited by 5,711
Cited by
Host genotype and age shape the leaf and root microbiomes of a wild perennial plant
Wagner, M. R., Lundberg, D. S., del Rio, T. G., Tringe, S. G., Dangl, J. L., & Mitchell-Olds, T. (2016) · Nature Communications · doi:10.1038/ncomms12151 · Cited by 990
Fungal endophytes: modifiers of plant disease
Busby, P. E., Ridout, M., & Newcombe, G. (2016) · Plant Molecular Biology · doi:10.1007/s11103-015-0412-0 · Cited by 445
The Populus holobiont: dissecting the effects of plant niches and genotype on the microbiome
Cregger, M. A., Veach, A. M., Yang, Z. K., Crouch, M. J., Vilgalys, R., Tuskan, G. A., & Schadt, C. W. (2018) · Microbiome · doi:10.1186/s40168-018-0413-8 · Cited by 435
Self-citationFoulon, J., Zappelini, C., Durand, A., Valot, B., Blaudez, D., & Chalot, M. (2016) · FEMS Microbiology Ecology · doi:10.1093/femsec/fiw163 · Cited by 42
Metadata
- Authors
- Bonito, G., Reynolds, H., Robeson, M. S., Nelson, J., Hodkinson, B. P., Tuskan, G., Schadt, C. W., & Vilgalys, R.
- Venue
- Molecular Ecology
- Publisher
- Wiley
- Published
- 2014-06-24
- Volume
- 23
- Issue
- 13
- Pages
- 3356-3370
- ISSN
- 0962-1083 (ISSN-L)
- 1365-294X
- OpenAlex
- W2137915493
- Cited by
- 295
- References
- 2
- FWCI
- 22.71
- Type
- journal article
- Language
- en
- Open access
- closed
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- CoChat. (2026). Citation check: Plant host and soil origin influence fungal and bacterial assemblages in the roots of woody plants. https://app.cochat.ai/papers/10.1111/mec.12821
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- Bonito, G., Reynolds, H., Robeson, M. S., Nelson, J., Hodkinson, B. P., Tuskan, G., Schadt, C. W., & Vilgalys, R. (2014). Plant host and soil origin influence fungal and bacterial assemblages in the roots of woody plants. Molecular Ecology. https://doi.org/10.1111/mec.12821
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