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The role of miR156/SPL s modules in Arabidopsis lateral root development
Abstract
Summary: miR156 is an evolutionarily highly conserved mi RNA in plants that defines an age‐dependent flowering pathway. The investigations thus far have largely, if not exclusively, confined to plant aerial organs. Root branching architecture is a major determinant of water and nutrients uptake for plants. We show here that MIR 156 genes are differentially expressed in specific cells/tissues of lateral roots. Plants overexpressing miR156 produce more lateral roots whereas reducing miR156 levels leads to fewer lateral roots. We demonstrate that at least one representative from the three groups of miR156 targets SQUAMOSA PROMOTER BINDING PROTEIN‐LIKE (SPL) genes: SPL 3, SPL 9 and SPL 10 are involved in the repression of lateral root growth, with SPL 10 playing a dominant role. In addition, both MIR 156 and SPL s are responsive to auxin signaling suggesting that miR156/SPL modules might be involved in the proper timing of the lateral root developmental progression. Collectively, these results unravel a role for miR156/SPL s modules in lateral root development in Arabidopsis.
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Cites
Local, Efflux-Dependent Auxin Gradients as a Common Module for Plant Organ Formation
Benková, E., Michniewicz, M., Sauer, M., Teichmann, T., Seifertová, D., Jürgens, G., & Friml, J. (2003) · Cell · doi:10.1016/s0092-8674(03)00924-3 · Cited by 2,633
Target mimicry provides a new mechanism for regulation of microRNA activity
Franco-Zorrilla, J. M., Valli, A., Todesco, M., Mateos, I., Puga, M. I., Rubio-Somoza, I., Leyva, A., Weigel, D., García, J. A., & Paz-Ares, J. (2007) · Nature Genetics · doi:10.1038/ng2079 · Cited by 2,069
The Sequential Action of miR156 and miR172 Regulates Developmental Timing in Arabidopsis
Wu, G., Park, M. Y., Conway, S. R., Wang, J.-W., Weigel, D., & Poethig, R. S. (2009) · Cell · doi:10.1016/j.cell.2009.06.031 · Cited by 1,678
Wang, J.-W., Czech, B., & Weigel, D. (2009) · Cell · doi:10.1016/j.cell.2009.06.014 · Cited by 1,489
Organization and cell differentiation in lateral roots of Arabidopsis thaliana
Malamy, J. E., & Benfey, P. N. (1997) · Development · doi:10.1242/dev.124.1.33 · Cited by 1,258
Protocol: a highly sensitive RT-PCR method for detection and quantification of microRNAs
Varkonyi-Gasic, E., Wu, R., Wood, M., Walton, E. F., & Hellens, R. P. (2007) · Plant Methods · doi:10.1186/1746-4811-3-12 · Cited by 1,186
Temporal regulation of shoot development in Arabidopsis thaliana by miR156 and its target SPL3
Wu, G., & Poethig, R. S. (2006) · Development · doi:10.1242/dev.02521 · Cited by 1,074
Arabidopsis AUX1 Gene: A Permease-Like Regulator of Root Gravitropism
Bennett, M. J., Marchant, A., Green, H. G., May, S. T., Ward, S. P., Millner, P. A., Walker, A. R., Schulz, B., & Feldmann, K. A. (1996) · Science · doi:10.1126/science.273.5277.948 · Cited by 1,052
Intrinsic and environmental response pathways that regulate root system architecture
MALAMY, J. E. (2005) · Plant, Cell & Environment · doi:10.1111/j.1365-3040.2005.01306.x · Cited by 1,018
Guo, H.-S., Xie, Q., Fei, J.-F., & Chua, N.-H. (2005) · The Plant Cell · doi:10.1105/tpc.105.030841 · Cited by 1,005
Self-citationGou, J.-Y., Felippes, F. F., Liu, C.-J., Weigel, D., & Wang, J.-W. (2011) · The Plant Cell · doi:10.1105/tpc.111.084525 · Cited by 953
Cell Signalling by MicroRNA165/6 Directs Gene Dose-Dependent Root Cell Fate
Carlsbecker, A., Lee, J.-Y., Roberts, C. J., Dettmer, J., Lehesranta, S., Zhou, J., Lindgren, O., Moreno-Risueno, M. A., Vatén, A., Thitamadee, S., et al. (2010) · Nature · doi:10.1038/nature08977 · Cited by 861
Control of Root Cap Formation by MicroRNA-Targeted Auxin Response Factors in Arabidopsis
Wang, J.-W., Wang, L.-J., Mao, Y.-B., Cai, W.-J., Xue, H.-W., & Chen, X.-Y. (2005) · The Plant Cell · doi:10.1105/tpc.105.033076 · Cited by 861
Reyes, J. L., & Chua, N. (2007) · The Plant Journal · doi:10.1111/j.1365-313x.2006.02980.x · Cited by 824
Self-citationArabidopsis lateral root development: an emerging story
Péret, B., De Rybel, B., Casimiro, I., Benková, E., Swarup, R., Laplaze, L., Beeckman, T., & Bennett, M. J. (2009) · Trends in Plant Science · doi:10.1016/j.tplants.2009.05.002 · Cited by 818
The auxin influx carrier LAX3 promotes lateral root emergence
Swarup, K., Benková, E., Swarup, R., Casimiro, I., Péret, B., Yang, Y., Parry, G., Nielsen, E., De Smet, I., Vanneste, S., et al. (2008) · Nature Cell Biology · doi:10.1038/ncb1754 · Cited by 817
Stief, A., Altmann, S., Hoffmann, K., Pant, B. D., Scheible, W.-R., & Bäurle, I. (2014) · The Plant Cell · doi:10.1105/tpc.114.123851 · Cited by 650
Yamaguchi, A., Wu, M.-F., Yang, L., Wu, G., Poethig, R. S., & Wagner, D. (2009) · Developmental Cell · doi:10.1016/j.devcel.2009.06.007 · Cited by 646
Auxin-dependent regulation of lateral root positioning in the basal meristem of Arabidopsis
De Smet, I., Tetsumura, T., De Rybel, B., Frey, N. F. D., Laplaze, L., Casimiro, I., Swarup, R., Naudts, M., Vanneste, S., Audenaert, D., et al. (2007) · Development · doi:10.1242/dev.02753 · Cited by 620
Gandikota, M., Birkenbihl, R. P., Höhmann, S., Cardon, G. H., Saedler, H., & Huijser, P. (2007) · The Plant Journal · doi:10.1111/j.1365-313x.2006.02983.x · Cited by 615
Expression of artificial microRNAs in transgenic Arabidopsis thaliana confers virus resistance
Niu, Q.-W., Lin, S.-S., Reyes, J. L., Chen, K.-C., Wu, H.-W., Yeh, S.-D., & Chua, N.-H. (2006) · Nature Biotechnology · doi:10.1038/nbt1255 · Cited by 565
Self-citationHidden Branches: Developments in Root System Architecture
Osmont, K. S., Sibout, R., & Hardtke, C. S. (2007) · Annual Review of Plant Biology · doi:10.1146/annurev.arplant.58.032806.104006 · Cited by 556
The microRNA regulated SBP-box genes SPL9 and SPL15 control shoot maturation in Arabidopsis
Schwarz, S., Grande, A. V., Bujdoso, N., Saedler, H., & Huijser, P. (2008) · Plant Molecular Biology · doi:10.1007/s11103-008-9310-z · Cited by 520
Wang, J.-W., Schwab, R., Czech, B., Mica, E., & Weigel, D. (2008) · The Plant Cell · doi:10.1105/tpc.108.058180 · Cited by 513
SINAT5 promotes ubiquitin-related degradation of NAC1 to attenuate auxin signals
Xie, Q., Guo, H.-S., Dallman, G., Fang, S., Weissman, A. M., & Chua, N.-H. (2002) · Nature · doi:10.1038/nature00998 · Cited by 468
Self-citationRegulation of flowering time and floral patterning by miR172
Zhu, Q.-H., & Helliwell, C. A. (2011) · Journal of Experimental Botany · doi:10.1093/jxb/erq295 · Cited by 405
Todesco, M., Rubio-Somoza, I., Paz-Ares, J., & Weigel, D. (2010) · PLoS Genetics · doi:10.1371/journal.pgen.1001031 · Cited by 394
Xing, S., Salinas, M., Höhmann, S., Berndtgen, R., & Huijser, P. (2011) · The Plant Cell · doi:10.1105/tpc.110.079343 · Cited by 365
Temporal Control of Trichome Distribution by MicroRNA156-Targeted SPL Genes in Arabidopsis thaliana
Yu, N., Cai, W.-J., Wang, S., Shan, C.-M., Wang, L.-J., & Chen, X.-Y. (2010) · The Plant Cell · doi:10.1105/tpc.109.072579 · Cited by 343
Self-citationYang, L., Xu, M., Koo, Y., He, J., & Poethig, R. S. (2013) · eLife · doi:10.7554/elife.00260 · Cited by 341
Sugar is an endogenous cue for juvenile-to-adult phase transition in plants
Yu, S., Cao, L., Zhou, C.-M., Zhang, T.-Q., Lian, H., Sun, Y., Wu, J., Huang, J., Wang, G., & Wang, J.-W. (2013) · eLife · doi:10.7554/elife.00269 · Cited by 319
Shikata, M., Koyama, T., Mitsuda, N., & Ohme-Takagi, M. (2009) · Plant and Cell Physiology · doi:10.1093/pcp/pcp148 · Cited by 280
Kinoshita, N., Wang, H., Kasahara, H., Liu, J., MacPherson, C., Machida, Y., Kamiya, Y., Hannah, M. A., & Chua, N.-H. (2012) · The Plant Cell · doi:10.1105/tpc.112.097006 · Cited by 230
Self-citationUsami, T., Horiguchi, G., Yano, S., & Tsukaya, H. (2009) · Development · doi:10.1242/dev.028613 · Cited by 210
Shaping a root system: regulating lateral versus primary root growth
Tian, H., De Smet, I., & Ding, Z. (2014) · Trends in Plant Science · doi:10.1016/j.tplants.2014.01.007 · Cited by 201
Yang, L., Conway, S. R., & Poethig, R. S. (2011) · Development · doi:10.1242/dev.058578 · Cited by 183
Senecoff, J. F., McKinney, E. C., & Meagher, R. B. (1996) · PLANT PHYSIOLOGY · doi:10.1104/pp.112.3.905 · Cited by 46
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Xu, M., Hu, T., Zhao, J., Park, M.-Y., Earley, K. W., Wu, G., Yang, L., & Poethig, R. S. (2016) · PLOS Genetics · doi:10.1371/journal.pgen.1006263 · Cited by 586
Fukao, T., Barrera-Figueroa, B. E., Juntawong, P., & Peña-Castro, J. M. (2019) · Frontiers in Plant Science · doi:10.3389/fpls.2019.00340 · Cited by 401
Small RNAs: Big Impact on Plant Development
D’Ario, M., Griffiths-Jones, S., & Kim, M. (2017) · Trends in Plant Science · doi:10.1016/j.tplants.2017.09.009 · Cited by 304
MicroRNA156 improves drought stress tolerance in alfalfa ( Medicago sativa ) by silencing SPL13
Arshad, M., Feyissa, B. A., Amyot, L., Aung, B., & Hannoufa, A. (2017) · Plant Science · doi:10.1016/j.plantsci.2017.01.018 · Cited by 267
Metadata
- Authors
- Yu, N., Niu, Q., Ng, K., & Chua, N.
- Venue
- The Plant Journal
- Publisher
- Wiley
- Published
- 2015-07-14
- Volume
- 83
- Issue
- 4
- Pages
- 673-685
- ISSN
- 0960-7412 (ISSN-L)
- 1365-313X
- OpenAlex
- W2101749620
- Cited by
- 254
- References
- 37
- FWCI
- 18.89
- Type
- journal article
- Language
- en
- Open access
- closed
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