Transitions to asexuality result in excess amino acid substitutions
Abstract
Theory predicts that linkage between genetic loci reduces the efficiency of purifying selection. Because of the permanent linkage of all heritable genetic material, asexual lineages may be exceptionally prone to deleterious-mutation accumulation in both nuclear and organelle genes. Here, we show that the ratio of the rate of amino acid to silent substitution ( K a / K s ) in mitochondrial protein-coding genes is higher in obligately asexual lineages than in sexual lineages of the microcrustacean Daphnia pulex . Using a phylogeny-based approach to quantify the frequency of mutational-effect classes, we estimate that mitochondrial protein-coding genes in asexual lineages accumulate deleterious amino acid substitutions at four times the rate in sexual lineages. These results support the hypothesis that sexual reproduction plays a prominent role in reducing the mutational burden in populations.
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RELAX is in concordance with the analysis performed by Paland and Lynch (2006), who found an increase in omega in the asexual D. pulex lineages.
“In this instance, RELAX is in concordance with the analysis performed by Paland and Lynch (2006), who found an increase in ! in the asexual D. pulex lineages.”
From RELAX: Detecting Relaxed Selection in a Phylogenetic Framework (2015) · cites this paper as Paland and Lynch (2006)
Mitochondria are not part of the sexually reproducing genome, but they should experience the selective effects of a transition from sexuality to asexuality.
“Mitochondria are not part of the sexually reproducing genome, but they should experience the selective effects of a transition from sexuality to asexuality (Paland and Lynch 2006).”
From RELAX: Detecting Relaxed Selection in a Phylogenetic Framework (2015) · cites this paper as Paland and Lynch 2006
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McVean, G. A. T., & Charlesworth, B. (2000) · Genetics · doi:10.1093/genetics/155.2.929 · Cited by 336 · see citing works
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RELAX: Detecting Relaxed Selection in a Phylogenetic Framework
Wertheim, J. O., Murrell, B., Smith, M. D., Kosakovsky Pond, S. L., & Scheffler, K. (2015) · Molecular Biology and Evolution · doi:10.1093/molbev/msu400 · Cited by 778 · see citing works
- Authors
- Paland, S., & Lynch, M.
- Affiliations
- Indiana University Bloomington (US)
- ORCID
- Lynch, Michael
- Venue
- Science
- Published
- 2006-02-17
- Volume
- 311
- Issue
- 5763
- Pages
- 990-992
- ISSN
- 0036-8075 (ISSN-L)
- 1095-9203
- OpenAlex
- W2168263001
- Cited by
- 232
- References
- 2
- Citations by year
- 2026: 7 · 2024: 1 · 2023: 2 · 2022: 5 · 2021: 3 · 2020: 8 · 2019: 5 · 2018: 2 · 2017: 30 · 2016: 9 · 2015: 11 · 2014: 28 · 2013: 11 · 2012: 13
- FWCI
- 11.75
- Type
- journal article
- Language
- en
- Open access
- closed
- Locations
- Science (publishedVersion)
- PubMed (publishedVersion)
- Funders
- National Institute of General Medical Sciences (GM 36827, R01GM036827)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Evolution and Genetic Dynamics
- Life Sciences › Agricultural and Biological Sciences › Plant Science › Chromosomal and Genetic Variations
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Genomics and Phylogenetic Studies
- Keywords
- asexuality, deleterious mutation accumulation, purifying selection, dN/dS ratio, mitochondrial protein-coding genes, Daphnia pulex, sexual reproduction, mutational load, linkage disequilibrium
- MeSH terms
- Animals, Bayes Theorem, Daphnia, Female, Male, Mutation, Parthenogenesis, Phylogeny, Recombination, Genetic, Selection, Genetic, Sex, Likelihood Functions, Evolution, Molecular, Amino Acid Substitution, Mitochondrial Proteins, Genes, Mitochondrial
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