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The Fusarium graminearum Genome Reveals a Link Between Localized Polymorphism and Pathogen Specialization
Open accessAbstract
We sequenced and annotated the genome of the filamentous fungus Fusarium graminearum , a major pathogen of cultivated cereals. Very few repetitive sequences were detected, and the process of repeat-induced point mutation, in which duplicated sequences are subject to extensive mutation, may partially account for the reduced repeat content and apparent low number of paralogous (ancestrally duplicated) genes. A second strain of F. graminearum contained more than 10,000 single-nucleotide polymorphisms, which were frequently located near telomeres and within other discrete chromosomal segments. Many highly polymorphic regions contained sets of genes implicated in plant-fungus interactions and were unusually divergent, with higher rates of recombination. These regions of genome innovation may result from selection due to interactions of F. graminearum with its plant hosts.
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Cites
Multistate Outbreak of Fusarium Keratitis Associated With Use of a Contact Lens Solution
Chang, D. C., Grant, G. B., O’Donnell, K., Wannemuehler, K. A., Noble-Wang, J., Rao, C. Y., Jacobson, L. M., Crowell, C. S., Sneed, R. S., Lewis, F. M. T., et al. (2006) · JAMA · doi:10.1001/jama.296.8.953 · Cited by 600
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Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium
Ma, L.-J., van der Does, H. C., Borkovich, K. A., Coleman, J. J., Daboussi, M.-J., Di Pietro, A., Dufresne, M., Freitag, M., Grabherr, M., Henrissat, B., et al. (2010) · Nature · doi:10.1038/nature08850 · Cited by 1,772
Self-citationGenome sequencing and analysis of the filamentous fungus Penicillium chrysogenum
van den Berg, M. A., Albang, R., Albermann, K., Badger, J. H., Daran, J.-M., M Driessen, A. J., Garcia-Estrada, C., Fedorova, N. D., Harris, D. M., Heijne, W. H. M., et al. (2008) · Nature Biotechnology · doi:10.1038/nbt.1498 · Cited by 473
Gu, Q., Yang, Y., Yuan, Q., Shi, G., Wu, L., Lou, Z., Huo, R., Wu, H., Borriss, R., & Gao, X. (2017) · Applied and Environmental Microbiology · doi:10.1128/aem.01075-17 · Cited by 286
KAZAN, K., GARDINER, D. M., & MANNERS, J. M. (2012) · Molecular Plant Pathology · doi:10.1111/j.1364-3703.2011.00762.x · Cited by 272
Metadata
- Authors
- Cuomo, C. A., Güldener, U., Xu, J.-R., Trail, F., Turgeon, B. G., Di Pietro, A., Walton, J. D., Ma, L.-J., Baker, S. E., Rep, M., Adam, G., Antoniw, J., Baldwin, T., Calvo, S., Chang, Y.-L., DeCaprio, D., Gale, L. R., Gnerre, S., Goswami, R. S., Hammond-Kosack, K., Harris, L. J., Hilburn, K., Kennell, J. C., Kroken, S., Magnuson, J. K., Mannhaupt, G., Mauceli, E., Mewes, H.-W., Mitterbauer, R., Muehlbauer, G., Münsterkötter, M., Nelson, D., O'Donnell, K., Ouellet, T., Qi, W., Quesneville, H., Roncero, M. I. G., Seong, K.-Y., Tetko, I. V., Urban, M., Waalwijk, C., Ward, T. J., Yao, J., Birren, B. W., & Kistler, H. C.
- Venue
- Science
- Published
- 2007-09-07
- Volume
- 317
- Issue
- 5843
- Pages
- 1400-1402
- ISSN
- 0036-8075 (ISSN-L)
- 1095-9203
- OpenAlex
- W2140602911
- Cited by
- 897
- References
- 1
- FWCI
- 14.13
- Type
- journal article
- Language
- en
- Open access
- green
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- Cuomo, C. A., Güldener, U., Xu, J.-R., Trail, F., Turgeon, B. G., Di Pietro, A., Walton, J. D., Ma, L.-J., Baker, S. E., Rep, M., Adam, G., Antoniw, J., Baldwin, T., Calvo, S., Chang, Y.-L., DeCaprio, D., Gale, L. R., Gnerre, S., Goswami, R. S., . . . Kistler, H. C. (2007). The Fusarium graminearum Genome Reveals a Link Between Localized Polymorphism and Pathogen Specialization. Science. https://doi.org/10.1126/science.1143708
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Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.
