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Cited by 479

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Sequencing and Analyses of All Known Human Rhinovirus Genomes Reveal Structure and Evolution

Open access
Palmenberg, Ann C., Spiro, David, Kuzmickas, Ryan, Wang, Shiliang, Djikeng, Appolinaire, Rathe, Jennifer A., Fraser-Liggett, Claire M., Liggett, Stephen B.·2009·Science

Abstract

Infection by human rhinovirus (HRV) is a major cause of upper and lower respiratory tract disease worldwide and displays considerable phenotypic variation. We examined diversity by completing the genome sequences for all known serotypes ( n = 99). Superimposition of capsid crystal structure and optimal-energy RNA configurations established alignments and phylogeny. These revealed conserved motifs; clade-specific diversity, including a potential newly identified species (HRV-D); mutations in field isolates; and recombination. In analogy with poliovirus, a hypervariable 5′ untranslated region tract may affect virulence. A configuration consistent with nonscanning internal ribosome entry was found in all HRVs and may account for rapid translation. The data density from complete sequences of the reference HRVs provided high resolution for this degree of modeling and serves as a platform for full genome-based epidemiologic studies and antiviral or vaccine development.

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Metadata

Authors
Palmenberg, A. C., Spiro, D., Kuzmickas, R., Wang, S., Djikeng, A., Rathe, J. A., Fraser-Liggett, C. M., & Liggett, S. B.
Venue
Science
Published
2009-04-03
Volume
324
Issue
5923
Pages
55-59
ISSN
  • 0036-8075 (ISSN-L)
  • 1095-9203
OpenAlex
W2083623188
Cited by
479
References
1
FWCI
27.14
Type
journal article
Language
en
Open access
green

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CoChat. (2026). Citation check: Sequencing and Analyses of All Known Human Rhinovirus Genomes Reveal Structure and Evolution. https://app.cochat.ai/papers/10.1126/science.1165557
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Palmenberg, A. C., Spiro, D., Kuzmickas, R., Wang, S., Djikeng, A., Rathe, J. A., Fraser-Liggett, C. M., & Liggett, S. B. (2009). Sequencing and Analyses of All Known Human Rhinovirus Genomes Reveal Structure and Evolution. Science. https://doi.org/10.1126/science.1165557

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