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Impacts of the Cretaceous Terrestrial Revolution and KPg Extinction on Mammal Diversification
Abstract
Previous analyses of relations, divergence times, and diversification patterns among extant mammalian families have relied on supertree methods and local molecular clocks. We constructed a molecular supermatrix for mammalian families and analyzed these data with likelihood-based methods and relaxed molecular clocks. Phylogenetic analyses resulted in a robust phylogeny with better resolution than phylogenies from supertree methods. Relaxed clock analyses support the long-fuse model of diversification and highlight the importance of including multiple fossil calibrations that are spread across the tree. Molecular time trees and diversification analyses suggest important roles for the Cretaceous Terrestrial Revolution and Cretaceous-Paleogene (KPg) mass extinction in opening up ecospace that promoted interordinal and intraordinal diversification, respectively. By contrast, diversification analyses provide no support for the hypothesis concerning the delayed rise of present-day mammals during the Eocene Period.
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“Cats and other members of Carnivora last shared a common ancestor with humans ∼92 million years ago (2,3).”
From Comparative analysis of the domestic cat genome reveals genetic signatures underlying feline biology and domestication (2014) · cites this paper as [2]
Citations
Cites
Nowak, R. (1999) · doi:10.56021/9780801857898 · Cited by 4,102
The delayed rise of present-day mammals
Bininda-Emonds, O. R. P., Cardillo, M., Jones, K. E., MacPhee, R. D. E., Beck, R. M. D., Grenyer, R., Price, S. A., Vos, R. A., Gittleman, J. L., & Purvis, A. (2007) · Nature · doi:10.1038/nature05634 · Cited by 2,082
Resolution of the Early Placental Mammal Radiation Using Bayesian Phylogenetics
Murphy, W. J., Eizirik, E., O’Brien, S. J., Madsen, O., Scally, M., Douady, C. J., Teeling, E. C., Ryder, O. A., Stanhope, M. J., JONG, W. W. D., et al. (2001) · Science · doi:10.1126/science.1067179 · Cited by 1,306
Self-citationPlacental mammal diversification and the Cretaceous–Tertiary boundary
Springer, M. S., Murphy, W. J., Eizirik, E., & O’Brien, S. J. (2003) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0334222100 · Cited by 846
Self-citationConsequences of climate change on the tree of life in Europe
Thuiller, W., Lavergne, S., Roquet, C., Boulangeat, I., Lafourcade, B., & Araújo, M. B. (2011) · Nature · doi:10.1038/nature09705 · Cited by 613
A Jurassic eutherian mammal and divergence of marsupials and placentals
Luo, Z., Yuan, C.-X., Meng, Q.-J., & Ji, Q. (2011) · Nature · doi:10.1038/nature10291 · Cited by 538
Continental breakup and the ordinal diversification of birds and mammals
Hedges, S. B., Parker, P. H., Sibley, C. G., & Kumar, S. (1996) · Nature · doi:10.1038/381226a0 · Cited by 529
Estimating Species Phylogenies Using Coalescence Times among Sequences
Liu, L., Yu, L., Pearl, D. K., & Edwards, S. V. (2009) · Systematic Biology · doi:10.1093/sysbio/syp031 · Cited by 446
Using genomic data to unravel the root of the placental mammal phylogenyPreprint
Murphy, W. J., Pringle, T. H., Crider, T. A., Springer, M. S., & Miller, W. (2007) · Genome Research · doi:10.1101/gr.5918807 · Cited by 441
Self-citationThe supermatrix approach to systematics
DEQUEIROZ, A., & Gatesy, J. (2006) · Trends in Ecology & Evolution · doi:10.1016/j.tree.2006.10.002 · Cited by 420
Self-citationMammalian phylogeny reveals recent diversification rate shifts
Stadler, T. (2011) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1016876108 · Cited by 418
Self-citationRabosky, D. L. (2006) · Evolutionary Bioinformatics · doi:10.1177/117693430600200024 · Cited by 387
Self-citationCoalescent methods for estimating phylogenetic trees
Liu, L., Yu, L., Kubatko, L. S., Pearl, D. K., & Edwards, S. V. (2009) · Molecular Phylogenetics and Evolution · doi:10.1016/j.ympev.2009.05.033 · Cited by 385
Endemic African mammals shake the phylogenetic tree
Springer, M. S., Cleven, G. C., Madsen, O., JONG, W. W. D., Waddell, V. G., Amrine‐Madsen, H., & Stanhope, M. J. (1997) · Nature · doi:10.1038/40386 · Cited by 329
Self-citationRabosky, D. L. (2007) · PubMed Central · Cited by 329
Self-citationCretaceous eutherians and Laurasian origin for placental mammals near the K/T boundary
Wible, J. R., Rougier, G. W., Novacek, M. J., & Asher, R. J. (2007) · Nature · doi:10.1038/nature05854 · Cited by 298
Calibrating And Constraining Molecular Clocks
Benton, M. J., Donoghue, P. C. J., & Asher, R. J. (2009) · Oxford University Press eBooks · doi:10.1093/oso/9780199535033.003.0004 · Cited by 269
Flying Primates? Megabats Have the Advanced Pathway from Eye to Midbrain
Pettigrew, J. D. (1986) · Science · doi:10.1126/science.3945827 · Cited by 265
Dollo's law and the death and resurrection of genes.
Marshall, C. R., Raff, E. C., & Raff, R. A. (1994) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.91.25.12283 · Cited by 229
Body Size Evolution in Mammals: Complexity in Tempo and Mode
Cooper, N., & Purvis, A. (2010) · The American Naturalist · doi:10.1086/652466 · Cited by 199
ADAPTIVE ZONES AND THE ORDERS OF MAMMALS
Valen, L. M. V. (1971) · Evolution · doi:10.1111/j.1558-5646.1971.tb01898.x · Cited by 178
Phylogenetic trees and the future of mammalian biodiversity
Davies, T. J., Fritz, S. A., Grenyer, R., Orme, C. D. L., Bielby, J., Bininda‐Emonds, O. R. P., Cardillo, M., Jones, K. E., Gittleman, J. L., Mace, G. M., et al. (2008) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0801917105 · Cited by 173
Genomics, biogeography, and the diversification of placental mammals
Wildman, D. E., Uddin, M., Opazo, J. C., Liu, G., Lefort, V., Guindon, S., Gascuel, O., Grossman, L. I., Romero, R. J., & Goodman, M. (2007) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0704342104 · Cited by 173
Nishihara, H., Maruyama, S., & Okada, N. (2009) · Proceedings of the National Academy of Sciences of the United States of America · doi:10.1073/pnas.0809297106 · Cited by 172
The origins of modern biodiversity on land
Benton, M. J. (2010) · Philosophical Transactions of the Royal Society B Biological Sciences · doi:10.1098/rstb.2010.0269 · Cited by 168
Meredith, R. W., Gatesy, J., Murphy, W. J., Ryder, O. A., & Springer, M. S. (2009) · PLoS Genetics · doi:10.1371/journal.pgen.1000634 · Cited by 162
Self-citationA Phylogeny and Timescale for Marsupial Evolution Based on Sequences for Five Nuclear Genes
Meredith, R. W., Westerman, M., Case, J. A., & Springer, M. S. (2007) · Journal of Mammalian Evolution · doi:10.1007/s10914-007-9062-6 · Cited by 151
Self-citationQuantitative Analysis of the Timing of the Origin and Diversification of Extant Placental Orders
Archibald, J. D., & Deutschman, D. H. (2001) · Journal of Mammalian Evolution · doi:10.1023/a:1011317930838 · Cited by 137
Mammalian Evolution May not Be Strictly Bifurcating
Hallström, B. M., & Janke, A. (2010) · Molecular Biology and Evolution · doi:10.1093/molbev/msq166 · Cited by 136
Molecular phylogeny of the superorder Archonta.
Adkins, R. M., & Honeycutt, R. L. (1991) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.88.22.10317 · Cited by 126
Self-citationAdaptive Zones and the Orders of Mammals
Valen, L. V. (1971) · Evolution · doi:10.2307/2406935 · Cited by 71
Phylogeny of the Ferungulata (Mammalia: Laurasiatheria) as determined from phylogenomic data
Hou, Z., Romero, R. J., & Wildman, D. E. (2009) · Molecular Phylogenetics and Evolution · doi:10.1016/j.ympev.2009.05.002 · Cited by 18
Flagged first, then by citations
Research works printed but not linked: 2
- D. E. Wilson D. M. Reeder Mammal Species of the World (Johns Hopkins Univ. Press Baltimore MD ed. 3 2005).
- Fitzgerald E. M. G., Toothed mysticetes (Mammalia: Cetacea) from the Late Oligocene of Australia. Cranbrook Inst. Sci. Misc. Publ. 1, 25 [abstr.] (2005).
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MEGA6: Molecular Evolutionary Genetics Analysis version 6.0.
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Tamura, K., Stecher, G., & Kumar, S. (2021) · Molecular Biology and Evolution · doi:10.1093/molbev/msab120 · Cited by 23,008
Towards complete and error-free genome assemblies of all vertebrate species
Rhie, A., McCarthy, S. A., Fedrigo, O., Damas, J., Formenti, G., Koren, S., Uliano-Silva, M., Chow, W., Fungtammasan, A., Kim, J., et al. (2021) · Nature · doi:10.1038/s41586-021-03451-0 · Cited by 3,097
Whole-genome analyses resolve early branches in the tree of life of modern birds
Jarvis, E. D., Mirarab, S., Aberer, A. J., Li, B., Houde, P., Li, C., Ho, S. Y. W., Faircloth, B. C., Nabholz, B., Howard, J. T., et al. (2014) · Science · doi:10.1126/science.1253451 · Cited by 1,901
Self-citationAnalyses of pig genomes provide insight into porcine demography and evolution
Groenen, M. A. M., Archibald, A. L., Uenishi, H., Tuggle, C. K., Takeuchi, Y., Rothschild, M. F., Rogel-Gaillard, C., Park, C., Milan, D., Megens, H., et al. (2012) · Nature · doi:10.1038/nature11622 · Cited by 1,424
Metadata
- Authors
- Meredith, R. W., Janečka, J. E., Gatesy, J., Ryder, O. A., Fisher, C. A., Teeling, E. C., Goodbla, A., Eizirik, E., Simão, T. L. L., Stadler, T., Rabosky, D. L., Honeycutt, R. L., Flynn, J. J., Ingram, C. M., Steiner, C., Williams, T. L., Robinson, T. J., Burk-Herrick, A., Westerman, M., Ayoub, N. A., Springer, M. S., & Murphy, W. J.
- Affiliations
- University of California, Riverside (US)
- Texas A&M University (US)
- San Diego Zoo Institute for Conservation Research (US)
- University College Dublin (IE)
- Faculdade de Biociências, Pontifícia Universidade Católica do Rio Grande do Sul, Porto Alegre, RS 90619–900, Brazil.
- Pontifícia Universidade Católica do Rio Grande do Sul (BR)
- ETH Zurich (CH)
- University of California, Berkeley (US)
- Pepperdine University (US)
- American Museum of Natural History (US)
- Stellenbosch University (ZA)
- Department of Biology, University of California, Riverside, CA 92521, USA.
- La Trobe University (AU)
- Corresponding author
- Meredith, Robert W.
- Janečka, Jan E.
- Springer, Mark S.
- Murphy, William J.
- ORCID
- Venue
- Science
- Published
- 2011-10-28
- Volume
- 334
- Issue
- 6055
- Pages
- 521-524
- ISSN
- 0036-8075 (ISSN-L)
- 1095-9203
- OpenAlex
- W2140803428
- Cited by
- 1,464
- References
- 31
- Citations by year
- 2026: 32 · 2025: 51 · 2024: 60 · 2023: 72 · 2022: 72 · 2021: 90 · 2020: 112 · 2019: 108 · 2018: 110 · 2017: 114 · 2016: 134 · 2015: 124 · 2014: 156 · 2013: 130 · 2012: 90
- FWCI
- 84.70
- Type
- journal article
- Language
- en
- Open access
- closed
- Locations
- Science (publishedVersion)
- PubMed (publishedVersion)
- SUNScholar (Stellenbosch University) (submittedVersion)
- Topics
- Physical Sciences › Earth and Planetary Sciences › Paleontology › Evolution and Paleontology Studies
- Life Sciences › Agricultural and Biological Sciences › Ecology, Evolution, Behavior and Systematics › Plant Diversity and Evolution
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Genomics and Phylogenetic Studies
- Keywords
- Cretaceous-Paleogene mass extinction, mammal diversification, mammalian phylogeny, relaxed molecular clock, fossil calibration, ecospace, Eocene mammals, divergence time
- MeSH terms
- Animals, Biological Evolution, Fossils, Mammals, Molecular Sequence Data, Phylogeny, Evolution, Molecular, Extinction, Biological
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