Ryder, Oliver A.

Towards complete and error-free genome assemblies of all vertebrate species

Rhie, A., McCarthy, S. A., Fedrigo, O., Damas, J., Formenti, G., Koren, S., Uliano-Silva, M., Chow, W., Fungtammasan, A., Kim, J., et al. (2021) · Nature

Genomics and Phylogenetic StudiesChromosomal and Genetic Variations

Cited by 3,097

Towards complete and error-free genome assemblies of all vertebrate species

Rhie, A., McCarthy, S. A., Fedrigo, O., Damas, J., Formenti, G., Koren, S., Uliano-Silva, M., Chow, W., Fungtammasan, A., Gedman, G. L., et al. (2020) · Nature

Genomics and Phylogenetic StudiesChromosomal and Genetic Variations

Cited by 3,097

Whole-genome analyses resolve early branches in the tree of life of modern birds

Jarvis, E. D., Mirarab, S., Aberer, A. J., Li, B., Houde, P., Li, C., Ho, S. Y. W., Faircloth, B. C., Nabholz, B., Howard, J. T., et al. (2014) · Science

Genomics and Phylogenetic StudiesEvolution and Paleontology Studies

Cited by 1,901

Impacts of the Cretaceous Terrestrial Revolution and KPg extinction on mammal diversification

Meredith, R. W., Janečka, J. E., Gatesy, J., Ryder, O. A., Fisher, C. A., Teeling, E. C., Goodbla, A., Eizirik, E., Simão, T. L. L., Stadler, T., et al. (2011) · Science

Evolution and Paleontology StudiesPlant Diversity and Evolution

Cited by 1,464

The sequence and de novo assembly of the giant panda genome

Li, R., Fan, W., Tian, G., Zhu, H., He, L., Cai, J., Huang, Q., Cai, Q., Li, B., Bai, Y., et al. (2010) · Nature

Genomics and Phylogenetic StudiesChromosomal and Genetic Variations

Cited by 1,180

Comparative genomics reveals insights into avian genome evolution and adaptation

Zhang, G., Li, C., Li, Q., Li, B., Larkin, D. M., Lee, C., Storz, J. F., Antunes, A., Greenwold, M. J., Meredith, R. W., et al. (2014) · Science

Chromosomal and Genetic VariationsGenomics and Phylogenetic Studies

Cited by 1,055

Recalibrating equus evolution using the genome sequence of an early middle pleistocene horse

Orlando, L., Ginolhac, A., Zhang, G., Froese, D., Albrechtsen, A., Stiller, M., Schubert, M., Cappellini, E., Petersen, B., Moltke, I., et al. (2013) · Nature

Genomics and Phylogenetic StudiesVeterinary Equine Medical Research

Cited by 841

Genome Sequence, Comparative Analysis, and Population Genetics of the Domestic Horse

Wade, C. M., Giulotto, E., Sigurdsson, S., Zoli, M., Gnerre, S., Imsland, F., Lear, T. L., Adelson, D. L., Bailey, E., Bellone, R. R., et al. (2009) · Science

Veterinary Equine Medical ResearchGenetic and phenotypic traits in livestock

Cited by 822

Broad host range of SARS-CoV-2 predicted by comparative and structural analysis of ACE2 in vertebrates

Damas, J., Hughes, G. M., Keough, K. C., Painter, C. A., Persky, N. S., Corbo, M., Hiller, M., Koepfli, K.-P., Pfenning, A. R., Zhao, H., et al. (2020) · Proceedings of the National Academy of Sciences

SARS-CoV-2 and COVID-19 ResearchAnimal Virus Infections Studies

Cited by 633

Comparative biology of mammalian telomeres: hypotheses on ancestral states and the roles of telomeres in longevity determination

Gomes, N. M. V., Ryder, O. A., Houck, M. L., Charter, S. J., Walker, W., Forsyth, N. R., Austad, S. N., Venditti, C., Pagel, M., Shay, J. W., et al. (2011) · Aging Cell

Telomeres, Telomerase, and SenescenceGenetics, Aging, and Longevity in Model Organisms

Cited by 464

Dense sampling of bird diversity increases power of comparative genomics

Feng, S., Stiller, J., Deng, Y., Armstrong, J., Fang, Q., Reeve, A. H., Xie, D., Chen, G., Guo, C., Faircloth, B. C., et al. (2020) · Nature

Genomics and Phylogenetic StudiesChromosomal and Genetic Variations

Cited by 459

Large-scale ruminant genome sequencing provides insights into their evolution and distinct traits

Chen, L., Qiu, Q., Jiang, Y., Wang, K., Lin, Z., Li, Z., Bibi, F., Yang, Y., Wang, J., Nie, W., et al. (2019) · Science

Genomics and Phylogenetic StudiesEvolution and Paleontology Studies

Cited by 441

Integrating gene annotation with orthology inference at scale

Kirilenko, B. M., Munegowda, C., Osipova, E., Jebb, D., Sharma, V., Blumer, M., Morales, A. E., Ahmed, A.-W., Kontopoulos, D.-G., Hilgers, L., et al. (2023) · Science

Genomics and Phylogenetic StudiesChromosomal and Genetic Variations

Cited by 209

Three-dimensional genome rewiring in loci with human accelerated regions

Keough, K. C., Whalen, S., Inoue, F., Przytycki, P. F., Fair, T., Deng, C., Steyert, M., Ryu, H., Lindblad-Toh, K., Karlsson, E., et al. (2023) · Science

Genomics and Chromatin DynamicsChromosomal and Genetic Variations

Cited by 113

Ancient and modern genomes unravel the evolutionary history of the rhinoceros family

Liu, S., Westbury, M. V., Dussex, N., Mitchell, K. J., Sinding, M.-H. S., Heintzman, P. D., Duchêne, D. A., Kapp, J. D., von Seth, J., Heiniger, H., et al. (2021) · Cell

Genetic diversity and population structureEvolution and Paleontology Studies

Cited by 101

Reference genomes for conservation

Paez, S., Kraus, R. H. S., Shapiro, B., Gilbert, M. T. P., Jarvis, E. D., Vertebrate Genomes Project Conservation Group, Al-Ajli, F. O., Ceballos, G., Crawford, A. J., Fedrigo, O., et al. (2022) · Science

Genomics and Phylogenetic StudiesGenetic diversity and population structure

Cited by 83

Evaluating recovery potential of the northern white rhinoceros from cryopreserved somatic cells

Tunstall, T., Kock, R., Vahala, J., Diekhans, M., Fiddes, I., Armstrong, J., Paten, B., Ryder, O. A., & Steiner, C. C. (2018) · Genome Research

Genetic diversity and population structureGenetic and phenotypic traits in livestock

Cited by 50

Maximizing the potential for living cell banks to contribute to global conservation priorities

Mooney, A., Ryder, O. A., Houck, M. L., Staerk, J., Conde, D. A., & Buckley, Y. M. (2023) · Zoo Biology

Conservation, Ecology, Wildlife EducationWildlife Ecology and Conservation

Cited by 37

Exploring the limits of saving a subspecies: The ethics and social dynamics of restoring northern white rhinos ( Ceratotherium simum cottoni )

Ryder, O. A., Friese, C., Greely, H. T., Sandler, R., Saragusty, J., Durrant, B. S., & Redford, K. H. (2020) · Conservation Science and Practice

Environmental Philosophy and EthicsConservation, Ecology, Wildlife Education

Cited by 23