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The Role of Solvent Viscosity in the Dynamics of Protein Conformational Changes
Abstract
Nanosecond lasers were used to measure the rate of conformational changes in myoglobin after ligand dissociation at ambient temperatures. At low solvent viscosities the rate is independent of viscosity, but at high viscosities it depends on approximately the inverse first power of the viscosity. Kramers theory for unimolecular rate processes can be used to explain this result if the friction term is modified to include protein as well as solvent friction. The theory and experiment suggest that the dominant factor in markedly reducing the rate of conformational changes in myoglobin at low temperatures (<200 K) is the very high viscosity (>10 7 centipoise) of the glycerol-water solvent. That is, at low temperatures conformational substates may not be "frozen" so much as "stuck."
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Cites
Reaction-rate theory: fifty years after Kramers
Hänggi, P., Talkner, P., & Borkovec, M. (1990) · Reviews of Modern Physics · doi:10.1103/revmodphys.62.251 · Cited by 6,154
Cited by
THEORY OF PROTEIN FOLDING: The Energy Landscape Perspective
Onuchic, J. N., Luthey-Schulten, Z., & Wolynes, P. G. (1997) · Annual Review of Physical Chemistry · doi:10.1146/annurev.physchem.48.1.545 · Cited by 2,210
WATER MEDIATION IN PROTEIN FOLDING AND MOLECULAR RECOGNITION
Levy, Y., & Onuchic, J. N. (2006) · Annual Review of Biophysics and Biomolecular Structure · doi:10.1146/annurev.biophys.35.040405.102134 · Cited by 1,048
Protein folding in the landscape perspective: Chevron plots and non-arrhenius kinetics
Chan, H. S., & Dill, K. A. (1998) · Proteins: Structure, Function, and Genetics · doi:10.1002/(sici)1097-0134(19980101)30:1<2::aid-prot2>3.0.co;2-r · Cited by 438
Direct observation of fast protein folding: the initial collapse of apomyoglobin.
Ballew, R. M., Sabelko, J., & Gruebele, M. (1996) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.93.12.5759 · Cited by 314
Fast events in protein folding initiated by nanosecond laser photolysis.
Jones, C. M., Henry, E. R., Hu, Y., Chan, C. K., Luck, S. D., Bhuyan, A., Roder, H., Hofrichter, J., & Eaton, W. A. (1993) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.90.24.11860 · Cited by 306
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Metadata
- Authors
- Ansari, A., Jones, C. M., Henry, E. R., Hofrichter, J., & Eaton, W. A.
- Venue
- Science
- Published
- 1992-06-26
- Volume
- 256
- Issue
- 5065
- Pages
- 1796-1798
- ISSN
- 0036-8075 (ISSN-L)
- 1095-9203
- OpenAlex
- W1981716245
- Cited by
- 550
- References
- 1
- FWCI
- 4.45
- Type
- journal article
- Language
- en
- Open access
- closed
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- Ansari, A., Jones, C. M., Henry, E. R., Hofrichter, J., & Eaton, W. A. (1992). The Role of Solvent Viscosity in the Dynamics of Protein Conformational Changes. Science. https://doi.org/10.1126/science.1615323
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