The DOI matches its Crossref record; 12 of the 12 references it cites were found in a registry or an index.
Genomic islands of speciation separate cichlid ecomorphs in an East African crater lake
Open accessAbstract
Cichlids diverge within a crater lake: It is not clear how populations diversify and new species form at the genomic level, especially when they coexist in the same location. Malinsky et al. investigated how two ecomorphs of cichlid fish in a small lake in Tanzania are diversifying relative to each other. Although there is gene flow between the two forms, major regions of genetic divergence, known as genomic islands, separate the populations. Within these islands, the authors found genes likely to be associated with mate choice, supporting the idea that genetic changes related to breeding preferences are the first to diverge during speciation. Science , this issue p. 1493
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
Gene Ontology: tool for the unification of biology
Ashburner, M., Ball, C. A., Blake, J. A., Botstein, D., Butler, H., Cherry, J. M., Davis, A. P., Dolinski, K., Dwight, S. S., Eppig, J. T., et al. (2000) · Nature Genetics · doi:10.1038/75556 · Cited by 43,206
PLINK: a tool set for whole-genome association and population-based linkage analyses.
Purcell, S., Neale, B., Todd-Brown, K., Thomas, L., Ferreira, M. A. R., Bender, D., Maller, J., Sklar, P., de Bakker, P. I. W., Daly, M. J., et al. (2007) · The American Journal of Human Genetics · doi:10.1086/519795 · Cited by 34,089
BEDTools: a flexible suite of utilities for comparing genomic features
Quinlan, A. R., & Hall, I. M. (2010) · Bioinformatics · doi:10.1093/bioinformatics/btq033 · Cited by 27,437
RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
Stamatakis, A. (2006) · Bioinformatics · doi:10.1093/bioinformatics/btl446 · Cited by 15,582
Population Structure and Eigenanalysis
Patterson, N., Price, A. L., & Reich, D. (2006) · PLoS Genetics · doi:10.1371/journal.pgen.0020190 · Cited by 5,280
Multiple Comparisons of Log-Likelihoods with Applications to Phylogenetic Inference
Shimodaira, H., & Hasegawa, M. (1999) · Molecular Biology and Evolution · doi:10.1093/oxfordjournals.molbev.a026201 · Cited by 4,237
Enrichment Map: A Network-Based Method for Gene-Set Enrichment Visualization and Interpretation
Merico, D., Isserlin, R., Stueker, O., Emili, A., & Bader, G. D. (2010) · PLoS ONE · doi:10.1371/journal.pone.0013984 · Cited by 2,235
A linear complexity phasing method for thousands of genomes
Delaneau, O., Marchini, J., & Zagury, J.-F. (2012) · Nature Methods · doi:10.1038/nmeth.1785 · Cited by 1,850
Inference of Population Structure using Dense Haplotype Data
Lawson, D. J., Hellenthal, G., Myers, S., & Falush, D. (2012) · PLoS Genetics · doi:10.1371/journal.pgen.1002453 · Cited by 1,188
Estimating and interpreting F ST : The impact of rare variants
Bhatia, G., Patterson, N., Sankararaman, S., & Price, A. L. (2013) · Genome Research · doi:10.1101/gr.154831.113 · Cited by 612
Cited by
Widespread selection and gene flow shape the genomic landscape during a radiation of monkeyflowers
Stankowski, S., Chase, M. A., Fuiten, A. M., Rodrigues, M. F., Ralph, P. L., & Streisfeld, M. A. (2019) · PLOS Biology · doi:10.1371/journal.pbio.3000391 · Cited by 134
Speciation as a sieve for ancestral polymorphism
Guerrero, R. F., & Hahn, M. W. (2017) · Molecular Ecology · doi:10.1111/mec.14290 · Cited by 109
York, R. A., Patil, C., Abdilleh, K., Johnson, Z. V., Conte, M. A., Genner, M. J., McGrath, P. T., Fraser, H. B., Fernald, R. D., & Streelman, J. T. (2018) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1810140115 · Cited by 60
Self-citationChoi, J. Y., Purugganan, M., & Stacy, E. A. (2020) · Molecular Biology and Evolution · doi:10.1093/molbev/msz259 · Cited by 35
15 years of introgression studies: quantifying gene flow across Eukaryotes
Dagilis, A. J., Peede, D., Coughlan, J. M., Jofre, G. I., D’Agostino, E. R. R., Mavengere, H., Tate, A. D., & Matute, D. R. (2021) · doi:10.1101/2021.06.15.448399 · Cited by 14
Accurate detection of convergent mutations in large protein alignments with ConDor
Morel, M., Zhukova, A., Lemoine, F., & Gascuel, O. (2024) · Genome Biology and Evolution · doi:10.1093/gbe/evae040 · Cited by 3
Metadata
- Authors
- Malinsky, M., Challis, R. J., Tyers, A. M., Schiffels, S., Terai, Y., Ngatunga, B. P., Miska, E. A., Durbin, R., Genner, M. J., & Turner, G. F.
- Venue
- Science
- Published
- 2015-12-18
- Volume
- 350
- Issue
- 6267
- Pages
- 1493-1498
- ISSN
- 0036-8075 (ISSN-L)
- 1095-9203
- OpenAlex
- W2191188021
- Cited by
- 420
- References
- 12
- FWCI
- 20.76
- Type
- journal article
- Language
- en
- Open access
- green
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review
Data sources
Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.
