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Software for Computing and Annotating Genomic Ranges

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A circadian gene expression atlas in mammals: Implications for biology and medicine

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HaploReg: a resource for exploring chromatin states, conservation, and regulatory motif alterations within sets of genetically linked variants

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An ultrasensitive method for quantitating circulating tumor DNA with broad patient coverage

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Formation of chromosomal domains by loop extrusion

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Mammalian WTAP is a regulatory subunit of the RNA N6-methyladenosine methyltransferase

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Nanopore sequencing and assembly of a human genome with ultra-long reads

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CNVkit: Genome-Wide Copy Number Detection and Visualization from Targeted DNA Sequencing

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Whole-genome analyses resolve early branches in the tree of life of modern birds

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Targeted Degradation of CTCF Decouples Local Insulation of Chromosome Domains from Genomic Compartmentalization

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Nrf2 suppresses macrophage inflammatory response by blocking proinflammatory cytokine transcription

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Genomic variation in 3,010 diverse accessions of Asian cultivated rice

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The Landscape of Circular RNA in Cancer

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A genomic mutational constraint map using variation in 76,156 human genomes

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A chromosome conformation capture ordered sequence of the barley genome

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Single-cell transcriptional diversity is a hallmark of developmental potential

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m 6 A mRNA methylation facilitates resolution of naïve pluripotency toward differentiation

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LUMPY: a probabilistic framework for structural variant discovery

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Population genomics of Bronze Age Eurasia

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Patients Tested at a Laboratory for Hereditary Cancer Syndromes Show an Overlap for Multiple Syndromes in Their Personal and Familial Cancer Histories

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Genome-wide association study of more than 40,000 bipolar disorder cases provides new insights into the underlying biology

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Landscape of Microsatellite Instability Across 39 Cancer Types

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The human transcriptome across tissues and individuals

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Multiplex single-cell profiling of chromatin accessibility by combinatorial cellular indexing

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Association analysis identifies 65 new breast cancer risk loci

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Small molecule inhibition of METTL3 as a strategy against myeloid leukaemia

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CEL-seq: single-cell RNA-seq by multiplexed linear amplification

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Araport11: a complete reannotation of the Arabidopsis thaliana reference genome

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A complete bacterial genome assembled de novo using only nanopore sequencing data

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N6-methyladenosine modification destabilizes developmental regulators in embryonic stem cells

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Next-Generation Sequencing Technology: Current Trends and Advancements

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GeneHancer: genome-wide integration of enhancers and target genes in GeneCards

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Transcriptome-wide isoform-level dysregulation in ASD, schizophrenia, and bipolar disorder

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A draft human pangenome reference.

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Mapping the Human miRNA Interactome by CLASH Reveals Frequent Noncanonical Binding

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Biogeography and individuality shape function in the human skin metagenome

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FOXG1-Dependent Dysregulation of GABA/Glutamate Neuron Differentiation in Autism Spectrum Disorders

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KLF4-dependent phenotypic modulation of smooth muscle cells has a key role in atherosclerotic plaque pathogenesis

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YTHDC1 mediates nuclear export of N6-methyladenosine methylated mRNAs

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BCG Educates Hematopoietic Stem Cells to Generate Protective Innate Immunity against Tuberculosis

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FTO-dependent demethylation of N6-methyladenosine regulates mRNA splicing and is required for adipogenesis

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Mosdepth: quick coverage calculation for genomes and exomes

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Genetic and functional drivers of diffuse large B cell lymphoma

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Purge Haplotigs: allelic contig reassignment for third-gen diploid genome assemblies

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Detecting DNA cytosine methylation using nanopore sequencing

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5-methylcytosine promotes mRNA export — NSUN2 as the methyltransferase and ALYREF as an m5C reader

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Genome-Wide Quantitative Enhancer Activity Maps Identified by STARR-seq

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Clonal evolution in breast cancer revealed by single nucleus genome sequencing

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Highly parallel direct RNA sequencing on an array of nanopores

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The whole-genome landscape of medulloblastoma subtypes

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Repetitive Elements May Comprise Over Two-Thirds of the Human Genome

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Resequencing 302 wild and cultivated accessions identifies genes related to domestication and improvement in soybean

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Cross-tissue organization of the fibroblast lineage

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