Timing the SARS-CoV-2 index case in Hubei Province

Pekar, Jonathan, Worobey, Michael, Moshiri, Niema, Scheffler, Konrad, Wertheim, Joel O.·2021·Science

Cited by (154)

Items 101–154 of 154

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    Alexandra Nunn, Andrea Morrissey, Ashley Crocker, Kaitlin A. Patterson, Joanne Stares, Kerri Smith, Laura Gilbert, Krista Wilkinson · 2023 · Canada Communicable Disease Report
  2. Scalable Epidemic Simulation Using FAVITES-Lite
    Niema Moshiri · 2025 · Methods in molecular biology
  3. The Data are Insufficient to Confidently Root the SARS-CoV-2 Phylogenetic Tree
    Jesse D. Bloom · 2025 · Molecular Biology and Evolution
  4. The Role of Micronutrients and Toxic Metals in the Management of Epidemics in Cambodia
    Tom Murphy, Kongkea Phan, Kim Neil Irvine, David R. S. Lean · 2021 · International Journal of Environmental Research and Public Health
  5. Major Problems Confronting the Covid-19 Pandemic
    JSM Leung · 2022 · Clinical Research and Clinical Trials
  6. SARS-CoV-2 Is Not Special, but the Pandemic Is: The Ecology, Evolution, Policy, and Future of the Deadliest Pandemic in Living Memory
    Jessica F. Brinkworth, Rachel M. Rusen · 2022 · Annual Review of Anthropology
  7. Phylogenetic analysis of SARS-CoV-2 viruses circulating in the South American region: Genetic relations and vaccine strain match
    Paula Perbolianachis, Diego Ferla, Rodrigo Arce, Irene Ferreiro, Alicia Costábile, Mercedes Paz, Diego Simón, Pilar Moreno, Juan Cristina · 2022 · Virus Research
  8. Epidemiology of COVID-19 in Individuals under 18 Years Old in Cartagena, Colombia: An Ecological Study of the First 14 Months of the Pandemic
    Steev Loyola, Eder Cano‐Pérez, Jaison Torres‐Pacheco, Dacia Malambo‐García, Rubén Sánchez Gómez, Doris Gómez‐Camargo · 2022 · Tropical Medicine and Infectious Disease
  9. COVID-19 in Missouri 2020-2021: A Perspective on Origins, Spread & Controversies, Part I.
    David S. McKinsey, Joel P. McKinsey, Neil B. Hampson, Maithe Enriquez · 2022 · PubMed Central
  10. Forensic Analysis of Novel SARS2r-CoV Identified in Game Animal Datasets in China Shows Evolutionary Relationship to Pangolin GX CoV Clade and Apparent Genetic Experimentation
    Adrian Jones, Steven E. Massey, Daoyu Zhang, Yuri Deigin, Steven C. Quay · 2022 · Applied Microbiology
  11. Treatment of patients with coronavirus disease 2019 and cross‐infection in dental clinics in Korea
    Na‐Young Lee, Han‐Na Kim · 2022 · International Journal of Dental Hygiene
  12. SARS-CoV-2 shows a much earlier divergence in the world than in the Chinese mainland
    Chaoyuan Cheng, Zhibin Zhang · 2023 · Science China Life Sciences
  13. Genome characterization based on the Spike-614 and NS8-84 loci of SARS-CoV-2 reveals two major possible onsets of the COVID-19 pandemic
    Xiaowen Hu, Yaojia Mu, Ruru Deng, Guohui Yi, Lei Yao, Jiaming Zhang · 2023 · PLoS ONE
  14. Why Wuhan? What the Circumstantial Evidence Says About the Origins of COVID-19
    Dan Ciuriak · 2020 · Journal of Analytical Techniques and Research
  15. Effects of COVID-19 2021 lockdown on the sleep quality and mental health of undergraduate medical and dental students of Pakistan: A cross-sectional study
    Naveen Siddique Sheikh, Aiza Anwar, Iqra Pervaiz, Zunaira Arshad, Huma Saeed Khan, Farida Hafeez · 2021 · medRxiv
  16. Development of an EBOV MiniG plus system as an advanced tool for anti-Ebola virus drug screening
    Chi-Ju Hsu, Cheng-Hsiu Chen, Wenting Chen, Ping‐Cheng Liu, Tein-Yao Chang, Meng-He Lin, Cheng-Cheung Chen, Hsing‐Yu Chen, Chih-Heng Huang, Yun-Hsiang Cheng et al. · 2023 · Heliyon
  17. Targeting Zoonotic Spillover Drivers for Global Pandemic Prevention: A Narrative Review
    Alexandra Mpakosi, Vasileios Cholevas, Alexandra Lianou, Foteini Tziraki, Ioannis Vogiatzis, Stamatios Cholevas, Ioannis Tzouvelekis, Maria Mironidou‐Tzouveleki, Konstantina A. Tsante, Deny Tsakri et al. · 2026 · Microorganisms
  18. Innovation: It’s in Our DNA
    Colleen M Kigin · 2022 · Physical Therapy
  19. Demographic patterns of exposure and transmission for a rural Canadian community outbreak of COVID-19, 2020
    Kaitlin A. Patterson, Mathieu Chalifoux, Rita Raafat Gad, Shannon Leblanc, Paige Paulsen, Louise Boudreau, Theresa Mazerolle, Mariane Pâquet · 2022 · Canada Communicable Disease Report
  20. Tendances démographiques de l’exposition à une éclosion de COVID-19 et de la transmission de cas dans une communauté rurale canadienne, 2020
    Kaitlin A. Patterson, Mathieu Chalifoux, Rita Raafat Gad, Shannon Leblanc, Paige Paulsen, Louise Boudreau, Theresa Mazerolle, Mariane Pâquet · 2022 · Relevé des maladies transmissibles au Canada
  21. It takes a village to build a virus
    Nash D. Rochman · 2023 · Proceedings of the National Academy of Sciences
  22. ‘My Sejahtera’ Application as COVID-19 Control Mechanism from Islamic Thought Perspective: Malaysia Experience
    Khadijah Mohd Khambali Hambali, Shahidra Binti Abdul Khalil, Mohd Zaidi Daud · 2022 · Jurnal Akidah & Pemikiran Islam
  23. COVID-19 humoral response
    Adam Tworek, Andrzej Rydzewski, Grażyna M. Rydzewska, Martyna Głuszek–Osuch, Konrad Lewandowski · 2023 · Medical Studies
  24. torchtree : Flexible Phylogenetic Model Development and Inference Using PyTorch
    Mathieu Fourment, Matthew Macaulay, Christiaan Swanepoel, Xiang Ji, Marc A. Suchard, Frederick A. Matsen IV · 2025 · Systematic Biology
  25. COVID-19: Not just another respiratory virus—2020
    Ian R. Tizard, Jeffrey M.B. Musser · 2022 · Elsevier eBooks
  26. Analyze the Outbreak of COVID-19 in Wuhan City Based on Large-Scale Events and Extreme Weather
    Xie De-ming, Tianyu Wang, Hai Liu, Pan Jiang · 2022 · Research Square
  27. Natural Antibodies and Severe Acute Respiratory Syndrome Coronavirus 2–Specific Antibodies in Healthy Asymptomatic Individuals
    Edward J. Steele, Reginald M. Gorczynski, Robyn Alice Lindley, N. Chandra Wickramasinghe · 2023 · Clinical Infectious Diseases
  28. An epigenetic clock in plants
    Prasad R. V. Satyaki · 2023 · Science
  29. Improved user-friendliness in the design and analysis of FAVITES-Lite simulations
    Kate Stadler, Kayla Phillips, Niema Moshiri · 2024 · medRxiv
  30. A stochastic epidemiological model to estimate the size of an outbreak at the first case identification
    Peter Czuppon, François Blanquart, Florence Débarre · 2020 · arXiv (Cornell University)
  31. Marginal cost of multiple nomenclature conventions for SARS-CoV-2 variants (Preprint)
    Hu Zhi, Zhangqiu Huang, Qihao Hu, Mengting Liu, Haihua Jiang · 2021
  32. Genome charaterization based on the Spike-614 and NS8-84 loci of SARS-CoV-2 reveals two major onsets of the COVID-19 pandemic
    Xiaowen Hu, Yaojia Mu, Ruru Deng, Guohui Yi, Lei Yao, Jiaming Zhang · 2022 · bioRxiv (Cold Spring Harbor Laboratory)
  33. The Pathological Basis for Severe Corona Virus Disease-19 in Diabetic Patients
    Esraah Sattar Alharris, Dina Saleh · 2022 · International Journal of Drug Delivery Technology
  34. Logistical challenges with an emphasis on organizing specialized triage in the conditions of a newly emerging, epidemiologically significant infectious pathogen for humans – SARS-CoV2
    Diana Pantileeva, Diana Rangelova, Petar Yordanov Atanasov, Snezhinka Mircheva, Ivaylo Ivanov, Maria Sevdelinova Chaneva, Danka Petrova Obreshkova, Stefka Achkova Ivanova, Stoyan Milanov, Krasimira Milcheva Kazalakova et al. · 2023 · Pharmacia
  35. Éclosion communautaire de COVID-19 du variant B.1.1.7 (Alpha) préoccupant à Terre-Neuve, février à mars 2021
    Alexandra Nunn, Andrea Morrissey, Ashley Crocker, Kaitlin A. Patterson, Joanne Stares, Kerri Smith, Laura Gilbert, Krista Wilkinson · 2023 · Relevé des maladies transmissibles au Canada
  36. The Effects of an Epidemic of Disease on the Global Market: A Coronavirus Disease Case Study
    He ChangDa, Amiya Bhaumik · 2023 · International Journal of Management and Human Sciences
  37. Subunit epitope vaccine prediction against SARS-CoV-2 using Transmembrane and C-terminal domains of envelope protein
    Rabia Nawaz, Aqsa Sarwar, Muhammad Ali Arif, Faiqa Noor, Zainab Ahmad, Anum Ajmal, Ammara Ahad, M. H. Qazi, Muhammad Shahid, Samia Afzal et al. · 2023 · Research Square
  38. The effect of international travel on the spread of COVID ‐19 in the United States
    Jeffrey T. Prince, Daniel H. Simon · 2023 · Southern Economic Journal
  39. Classification of a Massive Number of Viral Genomes and Estimation of Time of Most Recent Common Ancestor (tMRCA) of SARS-CoV-2 Using Phylodynamic Analsysis
    Xiaowen Hu, Siqin Guan, Yiliang He, Guohui Yi, Lei Yao, Jiaming Zhang · 2024 · BIO-PROTOCOL
  40. SARS-CoV-2 epidemiology, kinetics, and evolution: a narrative review
    Samuel Alizon, Mircea T. Sofonea · 2024
  41. Updated Assessment of the Probabilities for a Leading SARS-CoV-2 Origin Narrative
    Mai He, Lucia F. Dunn · 2024 · SSRN Electronic Journal
  42. Dating Primary Infection from a Threshold of Case Counts Using an Epidemiological Model: An Example Using Covid-19
    John L. Spouge, Zachary Stanke · 2024 · SSRN Electronic Journal
  43. Hybrid Analysis with Phylogeny and Population Modeling to Estimate the Recent Founding Date of a Population: A Case Study in the Origins of Covid-19 Illustrates How “Long-Time Samples” Can Simplify a Hybrid Analysis
    John L. Spouge · 2024 · SSRN Electronic Journal
  44. Early Financial Market Detection of COVID-19
    Shaen Corbet, Thomas Conlon · 2024 · SSRN Electronic Journal
  45. Hybrid analysis with phylogeny and population modeling to estimate the recent founding date of a population: A case study in the origins of COVID-19 illustrates how a branching process approximation can simplify a hybrid analysis
    John L. Spouge · 2025 · Mathematical Biosciences
  46. SARS-Coronavirus-2: The Unexpected Plague
    Van G. Wilson · 2025 · Springer eBooks
  47. The spread of the Delta variant in Catalonia during summer 2021: Modelling and interpretation
    Benjamin Steinegger, Giulio Burgio, Piergiorgio Castioni, Clara Granell, Àlex Arenas · 2025 · Journal of Infection and Public Health
  48. Using Ensemble and Multi-Model Learning to Predict Longitudinal Hospitalization of Cardiovascular Patients and Warn of Pandemic Risks: A Retrospective Cohort Study with External Validations
    Chengbo Fu, Zhe Zheng, Xiaoyan Yin, Xuanchu Ge, Xiangyu Zeng, Lingfeng Zha, Yike Li · 2025 · Research Square
  49. Evolutionary Insights From the COVID Pandemic: Genomic Diversity and Origins of SARS-CoV-2
    Matheus Augusto Calvano Cosentino, Filipe Romero Rebello Moreira, Mirela D’arc, André F. Santos · 2025 · Elsevier eBooks
  50. Additional file 1 of Optimal timing and effectiveness of COVID-19 outbreak responses in China: a modelling study
    Anthony Zhenhuan Zhang, Eva A. Enns · 2022 · Figshare
  51. Additional file 1 of An ncRNA transcriptomics-based approach to design siRNA molecules against SARS-CoV-2 double membrane vesicle formation and accessory genes
    Rabia Nawaz, Muhammad Ali Arif, Zainab Ahmad, Ammara Ahad, Shahid, Muhammad, Zohal Hassan, Husnain, Ali, Aslam, Ali, Raza, Muhammad Saad, Uqba Mehmood et al. · 2024 · Figshare
  52. De l'origine des maladies : la médecine environnementale : une nouvelle grille de lecture
    Jacques J. Reis · 2022
  53. Apport des outils de biologie moléculaire dans l'étude et la surveillance du SARS-CoV-2 au cours de la pandémie de COVID-19
    Valentin Leducq · 2023 · theses.fr (ABES)
  54. Decoding the ACE I/D polymorphism paradox in COVID-19 severity; Case series and meta-analysis
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