The DOI matches its Crossref record; 146 of the 146 references it cites were found in a registry or an index.
Diversity, Physiology, and Niche Differentiation of Ammonia-Oxidizing Archaea
Open accessAbstract
Nitrification, the aerobic oxidation of ammonia to nitrate via nitrite, has been suggested to have been a central part of the global biogeochemical nitrogen cycle since the oxygenation of Earth. The cultivation of several ammonia-oxidizing archaea (AOA) as well as the discovery that archaeal ammonia monooxygenase ( amo )-like gene sequences are nearly ubiquitously distributed in the environment and outnumber their bacterial counterparts in many habitats fundamentally revised our understanding of nitrification. Surprising insights into the physiological distinctiveness of AOA are mirrored by the recognition of the phylogenetic uniqueness of these microbes, which fall within a novel archaeal phylum now known as Thaumarchaeota . The relative importance of AOA in nitrification, compared to ammonia-oxidizing bacteria (AOB), is still under debate. This minireview provides a synopsis of our current knowledge of the diversity and physiology of AOA, the factors controlling their ecology, and their role in carbon cycling as well as their potential involvement in the production of the greenhouse gas nitrous oxide. It emphasizes the importance of activity-based analyses in AOA studies and formulates priorities for future research.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
THE INTERGOVERNMENTAL PANEL ON CLIMATE CHANGE
Shine, K. (1990) · Weather · doi:10.1002/j.1477-8696.1990.tb05660.x · Cited by 5,462
Nitrous Oxide (N 2 O): The Dominant Ozone-Depleting Substance Emitted in the 21st Century
Ravishankara, A. R., Daniel, J. S., & Portmann, R. W. (2009) · Science · doi:10.1126/science.1176985 · Cited by 4,581
Environmental genome shotgun sequencing of the sargasso sea
Venter, J. C., Remington, K., Heidelberg, J. F., Halpern, A. L., Rusch, D., Eisen, J. A., Wu, D., Paulsen, I., Nelson, K. E., Nelson, W., et al. (2004) · Science · doi:10.1126/science.1093857 · Cited by 4,376
Solomon, S. (2007) · Medical Entomology and Zoology · Cited by 4,149
Cell biology and molecular basis of denitrification.
Zumft, W. G. (1997) · Microbiology and molecular biology reviews : MMBR · doi:10.1128/.61.4.533-616.1997 · Cited by 3,471
Isolation of an autotrophic ammonia-oxidizing marine archaeon
Könneke, M., Bernhard, A. E., de la Torre, J. R., Walker, C. B., Waterbury, J. B., & Stahl, D. A. (2005) · Nature · doi:10.1038/nature03911 · Cited by 2,857
The Evolution and Future of Earth’s Nitrogen Cycle
Canfield, D. E., Glazer, A. N., & Falkowski, P. G. (2010) · Science · doi:10.1126/science.1186120 · Cited by 2,697
Archaea predominate among ammonia-oxidizing prokaryotes in soils
Leininger, S., Urich, T., Schloter, M., Schwark, L., Qi, J., Nicol, G. W., Prosser, J. I., Schuster, S. C., & Schleper, C. (2006) · Nature · doi:10.1038/nature04983 · Cited by 2,497
Ammonia oxidation kinetics determine niche separation of nitrifying Archaea and Bacteria
Martens-Habbena, W., Berube, P. M., Urakawa, H., de la Torre, J. R., & Stahl, D. A. (2009) · Nature · doi:10.1038/nature08465 · Cited by 1,651
Archaeal dominance in the mesopelagic zone of the Pacific Ocean
Karner, M. B., DeLong, E. F., & Karl, D. M. (2001) · Nature · doi:10.1038/35054051 · Cited by 1,592
Cited by
Archaea and the Human Gut: New Beginning of an Old Story
Gaci, N., Borrel, G., Tottey, W., O’Toole, P. W., & Brugère, J.-F. (2014) · World Journal of Gastroenterology · doi:10.3748/wjg.v20.i43.16062 · Cited by 422
Controls and Adaptive Management of Nitrification in Agricultural Soils
Norton, J., & Ouyang, Y. (2019) · Frontiers in Microbiology · doi:10.3389/fmicb.2019.01931 · Cited by 404
Metadata
- Authors
- Hatzenpichler, R.
- Venue
- Applied and Environmental Microbiology
- Publisher
- American Society for Microbiology
- Published
- 2012-11
- Volume
- 78
- Issue
- 21
- Pages
- 7501-7510
- ISSN
- 0099-2240 (ISSN-L)
- 1098-5336
- OpenAlex
- W2021306689
- Cited by
- 532
- References
- 146
- FWCI
- 39.23
- Type
- journal article
- Language
- en
- Open access
- bronze
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review
How to cite
Cite CoChat for the checks on this page, and the paper for its own findings.
- This page
- CoChat. (2026). Citation check: Diversity, Physiology, and Niche Differentiation of Ammonia-Oxidizing Archaea. https://app.cochat.ai/papers/10.1128/aem.01960-12
- The paper
- Hatzenpichler, R. (2012). Diversity, Physiology, and Niche Differentiation of Ammonia-Oxidizing Archaea. Applied and Environmental Microbiology. https://doi.org/10.1128/aem.01960-12
Data sources
Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.