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Oligonucleotide microchips as genosensors for determinative and environmental studies in microbiology
Open accessAbstract
The utility of parallel hybridization of environmental nucleic acids to many oligonucleotides immobilized in a matrix of polyacrylamide gel pads on a glass slide (oligonucleotide microchip) was evaluated. Oligonucleotides complementary to small-subunit rRNA sequences of selected microbial groups, encompassing key genera of nitrifying bacteria, were shown to selectively retain labeled target nucleic acid derived from either DNA or RNA forms of the target sequences. The utility of varying the probe concentration to normalize hybridization signals and the use of multicolor detection for simultaneous quantitation of multiple probe-target populations were demonstrated.
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Cited by
Intestinal microbiota in functional bowel disorders: a Rome foundation report
Simrén, M., Barbara, G., Flint, H. J., Spiegel, B. M. R., Spiller, R. C., Vanner, S., Verdu, E. F., Whorwell, P. J., & Zoetendal, E. G. (2013) · Gut · doi:10.1136/gutjnl-2012-302167 · Cited by 939
Rajilić‐Stojanović, M., Heilig, H. G. H. J., Molenaar, D., Kajander, K., Surakka, A., Smidt, H., & De Vos, W. M. (2009) · Environmental Microbiology · doi:10.1111/j.1462-2920.2009.01900.x · Cited by 484
Direct Detection of 16S rRNA in Soil Extracts by Using Oligonucleotide Microarrays
Small, J., Call, D. R., Brockman, F. J., Straub, T. M., & Chandler, D. P. (2001) · Applied and Environmental Microbiology · doi:10.1128/aem.67.10.4708-4716.2001 · Cited by 289
Nam, Y.-D., Kim, H. J., Seo, J.-G., Kang, S. W., & Bae, J.-W. (2013) · PLoS ONE · doi:10.1371/journal.pone.0082659 · Cited by 230
Metadata
- Authors
- Guschin, D. Y., Mobarry, B. K., Proudnikov, D., Stahl, D. A., Rittmann, B. E., & Mirzabekov, A. D.
- Venue
- Applied and Environmental Microbiology
- Publisher
- American Society for Microbiology
- Published
- 1997-06
- Volume
- 63
- Issue
- 6
- Pages
- 2397-2402
- ISSN
- 0099-2240 (ISSN-L)
- 1098-5336
- OpenAlex
- W2166131472
- Cited by
- 342
- References
- 0
- FWCI
- 16.83
- Type
- journal article
- Language
- en
- Open access
- bronze
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- CoChat. (2026). Citation check: Oligonucleotide microchips as genosensors for determinative and environmental studies in microbiology. https://app.cochat.ai/papers/10.1128/aem.63.6.2397-2402.1997
- The paper
- Guschin, D. Y., Mobarry, B. K., Proudnikov, D., Stahl, D. A., Rittmann, B. E., & Mirzabekov, A. D. (1997). Oligonucleotide microchips as genosensors for determinative and environmental studies in microbiology. Applied and Environmental Microbiology. https://doi.org/10.1128/aem.63.6.2397-2402.1997
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Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
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