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PCR primers to amplify 16S rRNA genes from cyanobacteria

Open access
Nübel, U, Garcia-Pichel, F, Muyzer, G·1997·Applied and Environmental Microbiology

Abstract

We developed and tested a set of oligonucleotide primers for the specific amplification of 16S rRNA gene segments from cyanobacteria and plastids by PCR. PCR products were recovered from all cultures of cyanobacteria and diatoms that were checked but not from other bacteria and archaea. Gene segments selectively retrieved from cyanobacteria and diatoms in unialgal but nonaxenic cultures and from cyanobionts in lichens could be directly sequenced. In the context of growing sequence databases, this procedure allows rapid and phylogenetically meaningful identification without pure cultures or molecular cloning. We demonstrate the use of this specific PCR in combination with denaturing gradient gel electrophoresis to probe the diversity of oxygenic phototrophic microorganisms in cultures, lichens, and complex microbial communities.

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Crossref · 10.1128/aem.63.8.3327-3332.1997

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Metadata

Authors
Nübel, U., Garcia-Pichel, F., & Muyzer, G.
Venue
Applied and Environmental Microbiology
Published
1997-08
Volume
63
Issue
8
Pages
3327-3332
ISSN
  • 0099-2240 (ISSN-L)
  • 1098-5336
OpenAlex
W2159620478
Cited by
1,513
References
2
FWCI
14.50
Type
journal article
Language
en
Open access
bronze

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CoChat. (2026). Citation check: PCR primers to amplify 16S rRNA genes from cyanobacteria. https://app.cochat.ai/papers/10.1128/aem.63.8.3327-3332.1997
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Nübel, U., Garcia-Pichel, F., & Muyzer, G. (1997). PCR primers to amplify 16S rRNA genes from cyanobacteria. Applied and Environmental Microbiology. https://doi.org/10.1128/aem.63.8.3327-3332.1997

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Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).

Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.