Fatty Acids Abolish Shigella Virulence by Inhibiting Its Master Regulator, VirF
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In the absence of a valid vaccine, the main therapeutic approach currently used to treat shigellosis is based on the use of antibiotics. The emergence of antibiotic resistance jeopardizes the future effectiveness of this approach.
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For S. dysenteriae, fatty acids, including lauric acid, interact with certain proteins to abolish their transcription and promotion activities.
“Specifically for S. dysenteriae, fatty acids, including lauric acid, interact with certain proteins to abolish their transcription and promotion activities (Trirocco et al. 2023).”
From Ethnomedicine, improved traditional medicine from Cocos nucifera water and evaluation of antibacterial activity on four bacterial strains in Center, Cameroon (2024) · cites this paper as Trirocco et al. 2023
The Discussion reports that lauric acid and other fatty acids bind VirF and limit its interaction with the virB promoter. However, the Results identify the tested bacterium as S. flexneri M90T; the paper does not establish this effect specifically in S. dysenteriae. (LLM, conf=0.88)
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- [1]The HC, Thanh DP, Holt KE, Thomson NR, Baker S. 2016. The genomic signatures of Shigella evolution, adaptation and geographical spread. Nat Rev Microbiol 14: 235– 250. doi: 10.1038/nrmicro.2016.10. 26923111 · DOI
- [2]Killackey SA, Sorbara MT, Girardin SE. 2016. Cellular aspects of Shigella pathogenesis: focus on the manipulation of host cell processes. Front Cell Infect Microbiol 6: 38. doi: 10.3389/fcimb.2016.00038. 27066460 PMC4814626 · DOI
- [3]Mattock E, Blocker AJ. 2017. How do the virulence factors of Shigella work together to cause disease? Front Cell Infect Microbiol 7: 64. doi: 10.3389/fcimb.2017.00064. 28393050 PMC5364150 · DOI
- [4]Pasqua M, Michelacci V, di Martino ML, Tozzoli R, Grossi M, Colonna B, Morabito S, Prosseda G. 2017. The intriguing evolutionary journey of enteroinvasive E. coli (EIEC) toward pathogenicity. Front Microbiol 8: 2390. doi: 10.3389/fmicb.2017.02390. 29259590 PMC5723341 · DOI
- [5]Phalipon A, Sansonetti PJ. 2007. Shigella’s ways of manipulating the host intestinal innate and adaptive immune system: a tool box for survival? Immunol Cell Biol 85: 119– 129. doi: 10.1038/sj.icb7100025. 17213832 · DOI
- [6]Sansonetti PJ. 1988. Molecular basis of invasion of eucaryotic cells by Shigella. Antonie Van Leeuwenhoek 54: 389– 393. doi: 10.1007/BF00461856. 3060008 · DOI
- [7]Parsot C. 2005. Shigella spp. and enteroinvasive Escherichia coli pathogenicity factors. FEMS Microbiol Lett 252: 11– 18. doi: 10.1016/j.femsle.2005.08.046. 16182469 · DOI
- [8]Beloin C, McKenna S, Dorman CJ. 2002. Molecular dissection of VirB, a key regulator of the virulence cascade of Shigella flexneri. J Biol Chem 277: 15333– 15344. doi: 10.1074/jbc.M111429200. 11850420 · DOI
- [9]Mavris M, Page AL, Tournebize R, Demers B, Sansonetti P, Parsot C. 2002. Regulation of transcription by the activity of the Shigella flexneri type III secretion apparatus. Mol Microbiol 43: 1543– 1553. doi: 10.1046/j.1365-2958.2002.02836.x. 11971264 · DOI
- [10]Bernardini ML, Mounier J, d'Hauteville H, Coquis-Rondon M, Sansonetti PJ. 1989. Identification of icsA, a plasmid locus of Shigella flexneri that governs bacterial intra- and intercellular spread through interaction with F-actin. Proc Natl Acad Sci USA 86: 3867– 3871. doi: 10.1073/pnas.86.10.3867. 2542950 PMC287242 · DOI
- [11]Scribano D, Petrucca A, Pompili M, Ambrosi C, Bruni E, Zagaglia C, Prosseda G, Nencioni L, Casalino M, Polticelli F, Nicoletti M. 2014. Polar localization of PhoN2, a periplasmic virulence-associated factor of Shigella flexneri, is required for proper IcsA exposition at the old bacterial pole. PLoS One 9: e90230. doi: 10.1371/journal.pone.0090230. 24587292 PMC3937361 · DOI
- [12]Kim DW, Lenzen G, Page AL, Legrain P, Sansonetti PJ, Parsot C. 2005. The Shigella flexneri effector OspG interferes with innate immune responses by targeting ubiquitin-conjugating enzymes. Proc Natl Acad Sci USA 102: 14046– 14051. doi: 10.1073/pnas.0504466102. 16162672 PMC1236552 · DOI
- [13]Ashida H, Mimuro H, Sasakawa C. 2015. Shigella manipulates host immune responses by delivering effector proteins with specific roles. Front Immunol 6: 219. doi: 10.3389/fimmu.2015.00219. 25999954 PMC4423471 · DOI
- [14]Di Martino ML, Romilly C, Wagner EGH, Colonna B, Prosseda G. 2016. One gene and two proteins: a leaderless mRNA supports the translation of a shorter form of the Shigella VirF regulator. mBio 7: e01860-16. doi: 10.1128/mBio.01860-16. 27834204 PMC5101355 · DOI
- [15]Di Martino ML, Falconi M, Micheli G, Colonna B, Prosseda G. 2016. The multifaceted activity of the VirF regulatory protein in the Shigella lifestyle. Front Mol Biosci 3: 61. doi: 10.3389/fmolb.2016.00061. 27747215 PMC5041530 · DOI
- [16]Prosseda G, Falconi M, Nicoletti M, Casalino M, Micheli G, Colonna B. 2002. Histone-like proteins and the Shigella invasivity regulon. Res Microbiol 153: 461– 468. doi: 10.1016/s0923-2508(02)01346-3. 12405354 · DOI
- [17]Falconi M, Colonna B, Prosseda G, Micheli G, Gualerzi CO. 1998. Thermoregulation of Shigella and Escherichia coli EIEC pathogenicity. A temperature-dependent structural transition of DNA modulates accessibility of virF promoter to transcriptional repressor H-NS. EMBO J 17: 7033– 7043. doi: 10.1093/emboj/17.23.7033. 9843508 PMC1171051 · DOI
- [18]Falconi M, Prosseda G, Giangrossi M, Beghetto E, Colonna B. 2001. Involvement of FIS in the H-NS-mediated regulation of virF gene of Shigella and enteroinvasive Escherichia coli. Mol Microbiol 42: 439– 452. doi: 10.1046/j.1365-2958.2001.02646.x. 11703666 · DOI
- [19]Prosseda G, Falconi M, Giangrossi M, Gualerzi CO, Micheli G, Colonna B. 2004. The virF promoter in Shigella: more than just a curved DNA stretch. Mol Microbiol 51: 523– 537. doi: 10.1046/j.1365-2958.2003.03848.x. 14756791 · DOI
- [20]Li W, Jiang L, Liu X, Guo R, Ma S, Wang J, Ma S, Li S, Li H. 2021. YhjC is a novel transcriptional regulator required for Shigella flexneri virulence. Virulence 12: 1661– 1671. doi: 10.1080/21505594.2021.1936767. 34152261 PMC8218686 · DOI
- [21]Skovajsová E, Colonna B, Prosseda G, Sellin ME, di Martino ML. 2022. The VirF21:VirF30 protein ratio is affected by temperature and impacts Shigella flexneri host cell invasion. FEMS Microbiol Lett 369: fnac043. doi: 10.1093/femsle/fnac043. 35521699 PMC9217107 · DOI
- [22]Gallegos MT, Schleif R, Bairoch A, Hofmann K, Ramos JL. 1997. Arac/XylS family of transcriptional regulators. Microbiol Mol Biol Rev 61: 393– 410. doi: 10.1128/mmbr.61.4.393-410.1997. 9409145 PMC232617 · DOI
- [23]Egan SM. 2002. Growing repertoire of AraC/XylS activators. J Bacteriol 184: 5529– 5532. doi: 10.1128/JB.184.20.5529-5532.2002. 12270809 PMC139625 · DOI
- [24]Ibarra JA, Pérez-Rueda E, Segovia L, Puente JL. 2008. The DNA-binding domain as a functional indicator: the case of the AraC/XylS family of transcription factors. Genetica 133: 65– 76. doi: 10.1007/s10709-007-9185-y. 17712603 · DOI
- [25]Perez-Rueda E, Hernandez-Guerrero R, Martinez-Nuñez MA, Armenta-Medina D, Sanchez I, Ibarra JA. 2018. Abundance, diversity and domain architecture variability in prokaryotic DNA-binding transcription factors. PLoS One 13: e0195332. doi: 10.1371/journal.pone.0195332. 29614096 PMC5882156 · DOI
- [26]Cortés-Avalos D, Martínez-Pérez N, Ortiz-Moncada MA, Juárez-González A, Baños-Vargas AA, Estrada-de Los Santos P, Pérez-Rueda E, Ibarra JA. 2021. An update of the unceasingly growing and diverse AraC/XylS family of transcriptional activators. FEMS Microbiol Rev 45: 1– 13. doi: 10.1093/femsre/fuab020. 33837749 · DOI
- [27]Bodero MD, Harden EA, Munson GP. 2008. Transcriptional regulation of subclass 5b fimbriae. BMC Microbiol 8: 180. doi: 10.1186/1471-2180-8-180. 18854044 PMC2579436 · DOI
- [28]Lowden MJ, Skorupski K, Pellegrini M, Chiorazzo MG, Taylor RK, Kull FJ. 2010. Structure of Vibrio cholerae ToxT reveals a mechanism for fatty acid regulation of virulence genes. Proc Natl Acad Sci USA 107: 2860– 2865. doi: 10.1073/pnas.0915021107. 20133655 PMC2840316 · DOI
- [29]Plecha SC, Withey JH. 2015. Mechanism for inhibition of Vibrio cholerae ToxT activity by the unsaturated fatty acid components of bile. J Bacteriol 197: 1716– 1725. doi: 10.1128/JB.02409-14. 25733618 PMC4402388 · DOI
- [30]Childers BM, Cao X, Weber GG, Demeler B, Hart PJ, Klose KE. 2011. N-terminal residues of the Vibrio cholerae virulence regulatory protein ToxT involved in dimerization and modulation by fatty acids. J Biol Chem 286: 28644– 28655. doi: 10.1074/jbc.M111.258780. 21673111 PMC3151105 · DOI
- [31]Midgett CR, Talbot KM, Day JL, Munson GP, Kull FJ. 2021. Structure of the master regulator Rns reveals an inhibitor of enterotoxigenic Escherichia coli virulence regulons. Sci Rep 11: 15663. doi: 10.1038/s41598-021-95123-2. 34341412 PMC8329261 · DOI
- [32]Cruite JT, Kovacikova G, Clark KA, Woodbrey AK, Skorupski K, Kull FJ. 2019. Structural basis for virulence regulation in Vibrio cholerae by unsaturated fatty acid components of bile. Commun Biol 2: 440. doi: 10.1038/s42003-019-0686-x. 31815195 PMC6882843 · DOI
- [33]Chowdhury R, Bitar PDP, Keresztes I, Condo AM, Altier C. 2021. A diffusible signal factor of the intestine dictates Salmonella invasion through its direct control of the virulence activator HilD. PLoS Pathog 17: e1009357. doi: 10.1371/journal.ppat.1009357. 33617591 PMC7932555 · DOI
- [34]Mitchell MK, Ellermann M. 2022. Long chain fatty acids and virulence repression in intestinal bacterial pathogens. Front Cell Infect Microbiol 12: 928503. doi: 10.3389/fcimb.2022.928503. 35782143 PMC9247172 · DOI
- [35]Karney MMA, McKenna JA, Weatherspoon-Griffin N, Karabachev AD, Millar ME, Potocek EA, Wing HJ. 2019. Investigating the DNA-binding site for VirB, a key transcriptional regulator of Shigella virulence genes, using an in vivo binding tool. Genes (Basel) 10: 149. doi: 10.3390/genes10020149. 30781432 PMC6410309 · DOI
- [36]Tobe T, Yoshikawa M, Mizuno T, Sasakawa C. 1993. Transcriptional control of the invasion regulatory gene virB of Shigella flexneri: activation by virF and repression by H-NS. J Bacteriol 175: 6142– 6149. doi: 10.1128/jb.175.19.6142-6149.1993. 7691791 PMC206708 · DOI
- [37]Ragazzone NJ, Dow GT, Garcia GA. 2022. Elucidation of key interactions between VirF and the virB promoter in Shigella flexneri using E. coli MarA- and GadX-based homology models and in vitro analysis of the DNA-binding domains of VirF and MarA. J Bacteriol 204: e0014322. doi: 10.1128/jb.00143-22. 36040161 PMC9487632 · DOI
- [38]Felleisen R, Zimmermann V, Gottstein B, Müller N. 1996. Use of a 96-well format for the affinity purification of maltose-binding protein (MBP) fusion proteins. Biotechniques 20: 616– 620. 8800681
- [39]Bahrani FK, Sansonetti PJ, Parsot C. 1997. Secretion of Ipa proteins by Shigella flexneri: inducer molecules and kinetics of activation. Infect Immun 65: 4005– 4010. doi: 10.1128/iai.65.10.4005-4010.1997. 9316999 PMC175575 · DOI
- [40]de Carvalho CCCR, Caramujo MJ. 2018. The various roles of fatty acids. Molecules 23: 2583. doi: 10.3390/molecules23102583. 30304860 PMC6222795 · DOI
- [41]Desbois AP, Smith VJ. 2010. Antibacterial free fatty acids: activities, mechanisms of action and biotechnological potential. Appl Microbiol Biotechnol 85: 1629– 1642. doi: 10.1007/s00253-009-2355-3. 19956944 · DOI
- [42]Kumar P, Lee JH, Beyenal H, Lee J. 2020. Fatty acids as antibiofilm and antivirulence agents. Trends Microbiol 28: 753– 768. doi: 10.1016/j.tim.2020.03.014. 32359781 · DOI · Paper page
- [43]Murzyn A, Krasowska A, Stefanowicz P, Dziadkowiec D, Łukaszewicz M. 2010. Capric acid secreted by S. boulardii inhibits C. albicans filamentous growth, adhesion and biofilm formation. PLoS One 5: e12050. doi: 10.1371/journal.pone.0012050. 20706577 PMC2919387 · DOI
- [44]Nicol M, Alexandre S, Luizet JB, Skogman M, Jouenne T, Salcedo SP, Dé E. 2018. Unsaturated fatty acids affect quorum sensing communication system and inhibit motility and biofilm formation of Acinetobacter baumannii. Int J Mol Sci 19: 214. doi: 10.3390/ijms19010214. 29320462 PMC5796163 · DOI
- [45]Teper D, Zhang Y, Wang N. 2019. TfmR, a novel TetR-family transcriptional regulator, modulates the virulence of Xanthomonas citri in response to fatty acids. Mol Plant Pathol 20: 701– 715. doi: 10.1111/mpp.12786. 30919570 PMC6637906 · DOI
- [46]Golubeva YA, Ellermeier JR, Chubiz JEC, Slauch JM. 2016. Intestinal long-chain fatty acids act as a direct signal to modulate expression of the Salmonella pathogenicity island 1 type III secretion system. mBio 7: e02170-15. doi: 10.1128/mBio.02170-15. 26884427 PMC4752608 · DOI
- [47]Black PN, DiRusso CC. 2003. Transmembrane movement of exogenous long-chain fatty acids: proteins, enzymes, and vectorial esterification. Microbiol Mol Biol Rev 67: 454– 472, table of contents. doi: 10.1128/MMBR.67.3.454-472.2003. 12966144 PMC193871 · DOI
- [48]Pavoncello V, Barras F, Bouveret E. 2022. Degradation of exogenous fatty acids in Escherichia coli. Biomolecules 12: 1019. doi: 10.3390/biom12081019. 35892328 PMC9329746 · DOI
- [49]Ogawa M, Yoshimori T, Suzuki T, Sagara H, Mizushima N, Sasakawa C. 2005. Escape of intracellular Shigella from autophagy. Science 307: 727– 731. doi: 10.1126/science.1106036. 15576571 · DOI
- [50]van Berge Henegouwen GP, van der Werf SDJ, Ruben AT. 1987. Fatty acid composition of phospholipids in bile in man: promoting effect of deoxycholate on arachidonate. Clin Chim Acta 165: 27– 37. doi: 10.1016/0009-8981(87)90215-4. 3111757 · DOI
- [51]Kotloff KL, Riddle MS, Platts-Mills JA, Pavlinac P, Zaidi AKM. 2018. Shigellosis. Lancet 391: 801– 812. doi: 10.1016/S0140-6736(17)33296-8. 29254859 · DOI
- [52]Baker S, The HC. 2018. Recent insights into Shigella: a major contributor to the global diarrhoeal disease burden. Curr Opin Infect Dis 31: 449– 454. doi: 10.1097/QCO.0000000000000475. 30048255 PMC6143181 · DOI
- [53]Williams PCM, Berkley JA. 2018. Guidelines for the treatment of dysentery (shigellosis): a systematic review of the evidence. Paediatr Int Child Health 38: S50– S65. doi: 10.1080/20469047.2017.1409454. 29790845 PMC6021764 · DOI
- [54]Puzari M, Sharma M, Chetia P. 2018. Emergence of antibiotic resistant Shigella species: a matter of concern. J Infect Public Health 11: 451– 454. doi: 10.1016/j.jiph.2017.09.025. 29066021 · DOI
- [55]Sakai T, Sasakawa C, Yoshikawa M. 1988. Expression of four virulence antigens of Shigella flexneri is positively regulated at the transcriptional level by the 30 kilodalton virF protein. Mol Microbiol 2: 589– 597. doi: 10.1111/j.1365-2958.1988.tb00067.x. 3141742 · DOI
- [56]Emanuele AA, Garcia GA. 2015. Mechanism of action and initial, in vitro SAR of an inhibitor of the Shigella flexneri virulence regulator VirF. PLoS One 10: e0137410. doi: 10.1371/journal.pone.0137410. 26352269 PMC4564171 · DOI
- [57]Koppolu V, Osaka I, Skredenske JM, Kettle B, Hefty PS, Li J, Egan SM. 2013. Small-molecule inhibitor of the Shigella flexneri master virulence regulator VirF. Infect Immun 81: 4220– 4231. doi: 10.1128/IAI.00919-13. 24002059 PMC3811841 · DOI
- [58]Woodbrey AK, Onyango EO, Pellegrini M, Kovacikova G, Taylor RK, Gribble GW, Jon Kull F. 2017. A new class of inhibitors of the AraC family virulence regulator Vibrio cholerae ToxT. Sci Rep 7: 45011. doi: 10.1038/srep45011. 28332578 PMC5362913 · DOI
- [59]Woodbrey AK, Onyango EO, Kovacikova G, Kull FJ, Gribble GW. 2018. A modified ToxT inhibitor reduces Vibrio cholerae virulence in vivo. Biochemistry 57: 5609– 5615. doi: 10.1021/acs.biochem.8b00667. 30160100 PMC6528795 · DOI
- [60]Markham LE, Tolbert JD, Kull FJ, Midgett CR, Micalizio GC. 2021. An enantiodefined conformationally constrained fatty acid mimetic and potent inhibitor of ToxT. ACS Med Chem Lett 12: 1493– 1497. doi: 10.1021/acsmedchemlett.1c00378. 34531958 PMC8436414 · DOI
- [62]Thomsen R, Christensen MH. 2006. MolDock: a new technique for high-accuracy molecular docking. J Med Chem 49: 3315– 3321. doi: 10.1021/jm051197e. 16722650 · DOI
- [63]Morris GM, Huey R, Olson AJ. 2008. Using AutoDock for ligand-receptor docking. Curr Protoc Bioinformatics Chapter 8: Unit 8.14. doi: 10.1002/0471250953.bi0814s24. 19085980 · DOI
- [64]Pasqua M, Grossi M, Scinicariello S, Aussel L, Barras F, Colonna B, Prosseda G. 2019. The MFS efflux pump EmrKY contributes to the survival of Shigella within macrophages. Sci Rep 9: 2906. doi: 10.1038/s41598-019-39749-3. 30814604 PMC6393483 · DOI
- [65]Datsenko KA, Wanner BL. 2000. One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. Proc Natl Acad Sci USA 97: 6640– 6645. doi: 10.1073/pnas.120163297. 10829079 PMC18686 · DOI
- [66]Fanelli G, Pasqua M, Colonna B, Prosseda G, Grossi M. 2020. Expression profile of multidrug resistance efflux pumps during intracellular life of adherent-invasive Escherichia coli strain LF82. Front Microbiol 11: 1935. doi: 10.3389/fmicb.2020.01935. 33013734 PMC7462009 · DOI
- [67]Livak KJ, Schmittgen TD. 2001. Analysis of relative gene expression data using real-time quantitative PCR and the 2(-delta delta C(T)) method. Methods 25: 402– 408. doi: 10.1006/meth.2001.1262. 11846609 · DOI · Paper page
- [68]Pasqua M, Zennaro A, Trirocco R, Fanelli G, Micheli G, Grossi M, Colonna B, Prosseda G. 2021. Modulation of OMV production by the lysis module of the DLP12 defective prophage of Escherichia coli K12. Microorganisms 9: 369– 314. doi: 10.3390/microorganisms9020369. 33673345 PMC7918800 · DOI
- [69]Leuzzi A, Grossi M, di Martino ML, Pasqua M, Micheli G, Colonna B, Prosseda G. 2017. Role of the SRRz/Rz1 lambdoid lysis cassette in the pathoadaptive evolution of Shigella. Int J Med Microbiol 307: 268– 275. doi: 10.1016/j.ijmm.2017.03.002. 28389211 · DOI
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LAMY, G. M. L., LIKENG, J. L. N., NDJIB, R. C., NDOUNGA, S. E. N., ELOMO, L. B., MBUH, S. M., NNANGA, L. S., MAHAMA, M., BIYON, J. B. N., HARMSEN, K., et al. (2024) · Asian Journal of Natural Product Biochemistry · doi:10.13057/biofar/f220104
- Authors
- Trirocco, R., Pasqua, M., Tramonti, A., Grossi, M., Colonna, B., Paiardini, A., & Prosseda, G.
- Affiliations
- Istituto Pasteur (IT)
- Institute of Molecular Biology and Pathology (IT)
- Sapienza University of Rome (IT)
- Corresponding author
- Prosseda, Gianni
- ORCID
- Venue
- Microbiology Spectrum
- Publisher
- American Society for Microbiology
- Published
- 2023-06-15
- Volume
- 11
- Issue
- 3
- Pages
- e0077823-e0077823
- ISSN
- 2165-0497 (ISSN-L)
- PMC
- PMC10269687
- OpenAlex
- W4368358421
- Cited by
- 16
- References
- 1
- Citations by year
- 2026: 7 · 2025: 5 · 2024: 1 · 2023: 3
- FWCI
- 2.97
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Licence
- Locations
- Microbiology Spectrum (publishedVersion, cc-by)
- PubMed Central (publishedVersion, cc-by)
- PubMed (publishedVersion)
- IRIS Research product catalog (Sapienza University of Rome) (submittedVersion, cc-by)
- DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion, cc-by-sa)
- Funders
- Ministero dell'Istruzione, dell'Università e della Ricerca (2017-20177J5Y3P)
- Sapienza Università di Roma
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Endocrinology › Escherichia coli research studies
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Bacterial Genetics and Biotechnology
- Life Sciences › Agricultural and Biological Sciences › Food Science › Salmonella and Campylobacter epidemiology
- Keywords
- Shigella, fatty acids, virF, virulence regulation, shigellosis, antibiotic resistance, bacterial virulence inhibition, Shigella flexneri
- MeSH terms
- Bacterial Proteins, Dysentery, Bacillary, Fatty Acids, Humans, Shigella, Shigella flexneri, Viral Proteins, Virulence, Gene Expression Regulation, Bacterial, Virulence Factors, Interferon Regulatory Factors, Molecular Docking Simulation
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