Cited by 866Light effects on plantsPlant Parasitism and ResistancePlant Molecular Biology Research

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Photoreceptor Signaling Networks in Plant Responses to Shade

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Casal, Jorge J.·2013·Annual Review of Plant Biology

DOI 10.1146/annurev-arplant-050312-120221

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Abstract

The dynamic light environment of vegetation canopies is perceived by phytochromes, cryptochromes, phototropins, and UV RESISTANCE LOCUS 8 (UVR8). These receptors control avoidance responses to preclude exposure to limiting or excessive light and acclimation responses to cope with conditions that cannot be avoided. The low red/far-red ratios of shade light reduce phytochrome B activity, which allows PHYTOCHROME INTERACTING FACTORS (PIFs) to directly activate the transcription of auxin-synthesis genes, leading to shade-avoidance responses. Direct PIF interaction with DELLA proteins links gibberellin and brassinosteroid signaling to shade avoidance. Shade avoidance also requires CONSTITUTIVE PHOTOMORPHOGENESIS 1 (COP1), a target of cryptochromes, phytochromes, and UVR8. Multiple regulatory loops and the input of the circadian clock create a complex network able to respond even to subtle threats of competition with neighbors while still compensating for major environmental fluctuations such as the day-night cycles.

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“Stem elongation is the common response that plants express in such conditions, to avoid shade and maximize light capture by elevating foliage position (Casal, 2013; Ballaré and Pierik, 2017).”
Background
UVR8-mediated inhibition of shade avoidance involves HFR1 stabilization in Arabidopsis
Tavridou, E., Schmid‐Siegert, E., Fankhauser, C., & Ulm, R. (2020) · PLoS Genetics · doi:10.1371/journal.pgen.1008797 · Cited by 43
“Under high R:FR, the phyB photoequilibrium is shifted towards the active PfrB conformer that interacts with bHLH transcription factors of the Phytochrome Interacting Factor (PIF) family, including PIF4 and PIF5 that play a major role in shade responses [4,6,7].”
Background
Green light augments far-red-light-induced shade response
Wang, Y., Zhang, T., & Folta, K. M. (2015) · Plant Growth Regulation · doi:10.1007/s10725-015-0046-x · Cited by 42
“The phot1phot2 mutant plants also have been shown to play a role in shade avoidance (Casal 2013), but here the results in Fig.”
Convergent regulation of PIFs and the E3 ligase COP1/SPA1 mediates thermosensory hypocotyl elongation by plant phytochromes
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Direct photoresponsive inhibition of a p53-like transcription activation domain in PIF3 by Arabidopsis phytochrome B
Yoo, C. Y., He, J., Sang, Q., Qiu, Y., Long, L., Kim, R. J.-A., Chong, E. G., Hahm, J., Morffy, N., Zhou, P., et al. (2021) · Nature Communications · doi:10.1038/s41467-021-25909-5 · Cited by 42
Setting the PAS, the role of circadian PAS domain proteins during environmental adaptation in plants
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“Phytochromes act as homodimeric red and far-red photoreceptors that are encoded by a small family of genes encompassing three clades, PHYA, PHYB, and PHYC (Casal, 2013).”
Background
Shadow on the Plant: A Strategy to Exit
Fankhauser, C., & Batschauer, A. (2016) · Cell · doi:10.1016/j.cell.2015.12.043 · Cited by 41
“Phytochrome- and PIF7-mediated SAS is caused by upregulation of auxin biosynthesis and redistribution of auxin (Li et al., 2012; Casal, 2013) (Figure 1A).”
Background
Photoperiodism dynamics during the domestication and improvement of soybean
Zhang, S., Wang, H., Wang, Z., Ren, Y., Niu, L., Liu, J., & Liu, B. (2017) · Science China Life Sciences · doi:10.1007/s11427-016-9154-x · Cited by 41
Neighbour signals perceived by phytochrome B increase thermotolerance in Arabidopsis
Arico, D. S., Legris, M., Castro, L., Garcia, C. F., Laino, A., Casal, J. J., & Mazzella, M. A. (2019) · Plant Cell & Environment · doi:10.1111/pce.13575 · Cited by 40
Self-citation
Orthogonal regulation of phytochrome B abundance by stress-specific plastidial retrograde signaling metabolite
Jiang, J., Zeng, L., Ke, H., Cruz, B. D. L., & Dehesh, K. (2019) · Nature Communications · doi:10.1038/s41467-019-10867-w · Cited by 41
Identification of TCP13 as an Upstream Regulator of ATHB12 during Leaf Development
Hur, Y., Kim, J., Kim, S., Son, O., Kim, W., Kim, G., Ohme‐Takagi, M., & Cheon, C. (2019) · Genes · doi:10.3390/genes10090644 · Cited by 41
“Arabidopsis thaliana homeobox 2 (ATHB2) and ATHB4, HD-Zip II proteins, are induced by a low ratio of red to far-red light and contribute to the shade avoidance response, including hypocotyl elongation [15,16].”
Background
Effects of nitrogen fertilization and planting density on intermediate wheatgrass yield
Fernandez, C. W., Ehlke, N. J., Sheaffer, C. C., & Jungers, J. M. (2020) · Agronomy Journal · doi:10.1002/agj2.20351 · Cited by 41
Characterization of Red/Green Cyanobacteriochrome NpR6012g4 by Solution Nuclear Magnetic Resonance Spectroscopy: A Hydrophobic Pocket for the C15-E,anti Chromophore in the Photoproduct
Rockwell, N. C., Martin, S. S., Lim, S., Lagarias, J. C., & Ames, J. B. (2015) · Biochemistry · doi:10.1021/acs.biochem.5b00438 · Cited by 41
Transmissivity of solar radiation within a Picea sitchensis stand under various sky conditions
Dengel, S., Grace, J., & MacArthur, A. (2015) · Biogeosciences · doi:10.5194/bg-12-4195-2015 · Cited by 40
“Blue light may have important implications for stomatal control, causing stomatal opening (Morison and Jarvis, 1983), while the red : far-red ratio is known to influence photomorphogenesis, heating regulation, as well as stem elongation and chlorophyll synthesis (Gates, 1965; Smith, 1982; Wherley et al., 2005; Casal,…”
Background
Building shade affects light environment and urban greenery in high-density residential estates in Singapore
Tan, P. Y., & Ismail, M. R. B. (2014) · Urban forestry & urban greening · doi:10.1016/j.ufug.2014.05.011 · Cited by 40
SPA proteins: SPAnning the gap between visible light and gene expression
Menon, C., Sheerin, D. J., & Hiltbrunner, A. (2016) · Planta · doi:10.1007/s00425-016-2509-3 · Cited by 41
Phytochrome A Protects Tomato Plants From Injuries Induced by Continuous Light
Vélez‐Ramírez, A. I., Vreugdenhil, D., Millenaar, F. F., & van Ieperen, W. (2019) · Frontiers in Plant Science · doi:10.3389/fpls.2019.00019 · Cited by 43
“Evidence shows that, similar to other phytochromes, PHYA Pfr is the active form in signaling, yet photocycling between Pr and Pfr forms is needed to both bind and, once inside the nucleus, release the FHY1/FHL transporters (Rausenberger et al., 2011).”
BackgroundInfluential
Phytochrome-interacting factors interact with transcription factor CONSTANS to suppress flowering in rose
Sun, J., Lu, J., Bai, M., Chen, Y., Wang, W., Fan, C., Liu, J., Ning, G., & Wang, C. (2021) · PLANT PHYSIOLOGY · doi:10.1093/plphys/kiab109 · Cited by 40
Wheat yield potential can be maximized by increasing red to far‐red light conditions at critical developmental stages
Dreccer, M. F., Zwart, A., Schmidt, R., Condon, A. G., Awasi, M. A., Grant, T. J., Gallé, A., Bourot, S., & Frohberg, C. (2022) · Plant Cell & Environment · doi:10.1111/pce.14390 · Cited by 39
Organ-specific COP1 control of BES1 stability adjusts plant growth patterns under shade or warmth
Rojas, C. C., Bianchimano, L., Oh, J., Romero‐Montepaone, S., Tarkowská, D., Minguet, E. G., Schön, J., Hourquet, M. G., Flugel, T., Blázquez, M. A., et al. (2022) · Developmental Cell · doi:10.1016/j.devcel.2022.07.003 · Cited by 39
Self-citation
Blue Light Simultaneously Induces Peel Anthocyanin Biosynthesis and Flesh Carotenoid/Sucrose Biosynthesis in Mango Fruit
Ni, J., Liao, Y., Zhang, M., Chen, P., Yang, Q., Bai, S., & Teng, Y. (2022) · Journal of Agricultural and Food Chemistry · doi:10.1021/acs.jafc.2c07137 · Cited by 39
Mathematical Models Light Up Plant Signaling
Chew, Y. H., Smith, R. W., Jones, H. J., Seaton, D. D., Grima, R., & Halliday, K. (2014) · The Plant Cell · doi:10.1105/tpc.113.120006 · Cited by 38
“Casal, J.J. (2013). Photoreceptor signaling networks in plant responses to”
Background
A judgment and decision‐making model for plant behavior
Karban, R., & Orrock, J. L. (2018) · Ecology · doi:10.1002/ecy.2418 · Cited by 39
The karrikin ‘calisthenics’: Can compounds derived from smoke help in stress tolerance?
Banerjee, A., Tripathi, D. K., & Roychoudhury, A. (2018) · Physiologia Plantarum · doi:10.1111/ppl.12836 · Cited by 43
Cell wall structure and composition is affected by light quality in tomato seedlings
Falcioni, R., Moriwaki, T., Pérez-Llorca, M., Munné‐Bosch, S., Gibin, M. S., Sato, F., Pelozo, A., Pattaro, M. C., Giacomelli, M. E., Rüggeberg, M., et al. (2019) · Journal of Photochemistry and Photobiology B Biology · doi:10.1016/j.jphotobiol.2019.111745 · Cited by 39
Artificial selection for grain yield has increased net CO2 exchange of the ear leaf in maize crops
Cagnola, J. I., Parco, M., Rotili, D. H., Ploschuk, E. L., Curín, F., Amas, J. I., Luque, S. F., Maddonni, G. Á., Otegui, M. E., & Casal, J. J. (2021) · Journal of Experimental Botany · doi:10.1093/jxb/erab119 · Cited by 41
Self-citation
There and Back Again: Loss and Reacquisition of Two‐Cys Photocycles in Cyanobacteriochromes
Rockwell, N. C., Martin, S. S., & Lagarias, J. C. (2017) · Photochemistry and Photobiology · doi:10.1111/php.12708 · Cited by 39
“For example, land plants utilize phytochrome proteins to detect red and far-red light (2-6).”
Phytochrome B links the environment to transcription
Hernando, C. E., Murcia, M. G., Pereyra, M. E., Sellaro, R., & Casal, J. J. (2021) · Journal of Experimental Botany · doi:10.1093/jxb/erab037 · Cited by 38
Self-citation
Emerging Hubs in Plant Light and Temperature Signaling
Lorenzo, C. D., Sánchez‐Lamas, M., Antonietti, M. S., & Cerdán, P. D. (2015) · Photochemistry and Photobiology · doi:10.1111/php.12535 · Cited by 40
On the induction of injury in tomato under continuous light: circadian asynchrony as the main triggering factor
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Shade avoidance responses become more aggressive in warm environments
Romero‐Montepaone, S., Poodts, S., Fischbach, P., Sellaro, R., Zurbriggen, M. D., & Casal, J. J. (2020) · Plant Cell & Environment · doi:10.1111/pce.13720 · Cited by 38
Self-citation
Phytochrome B dynamics departs from photoequilibrium in the field
Sellaro, R., Smith, R. W., Legris, M., Fleck, C. C., & Casal, J. J. (2018) · Plant Cell & Environment · doi:10.1111/pce.13445 · Cited by 38
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In Vitro Regeneration of Stevia (Stevia rebaudiana Bertoni) and Evaluation of the Impacts of Growth Media Nutrients on the Biosynthesis of Steviol Glycosides (SGs)
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“Plants possess several photoreceptors that are sensitive to changes in the spectral composition of light (Casal 2013; Paik and Huq 2019).”
Background
A missense allele of KARRIKIN-INSENSITIVE2 impairs ligand-binding and downstream signaling in Arabidopsis thaliana
Lee, I., Kim, K., Lee, S., Lee, S., Hwang, E., Shin, K., Kim, D., Choi, J., Choi, H., Cha, J. S., et al. (2018) · Journal of Experimental Botany · doi:10.1093/jxb/ery164 · Cited by 36
Far-red light during cultivation induces postharvest cold tolerance in tomato fruit
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Evolutionary origin of phytochrome responses and signaling in land plants
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Authors: Casal, J. J.
Affiliations: Consejo Nacional de Investigaciones Científicas y Técnicas (AR)
Corresponding author: Casal, Jorge J.
ORCID: Casal, Jorge J.
Venue: Annual Review of Plant Biology
Publisher: Annual Reviews
Published: 2013-04-29
Volume: 64
Issue: 1
Pages: 403-427
ISSN: 1543-5008 (ISSN-L)
1545-2123
DOI: 10.1146/annurev-arplant-050312-120221
OpenAlex: W2107201571
Cited by: 865
References: 144
Citations by year: 2026: 81 · 2025: 66 · 2024: 72 · 2023: 61 · 2022: 79 · 2021: 91 · 2020: 67 · 2019: 60 · 2018: 62 · 2017: 60 · 2016: 58 · 2015: 44 · 2014: 51 · 2013: 13
FWCI: 5.94
Type: journal article
Language: en
Open access: green
hdl.handle.net
Licence: cc-by-nc-nd
Locations: Annual Review of Plant Biology (publishedVersion)
PubMed (publishedVersion)
CONICET Digital (CONICET) (submittedVersion, cc-by-nc-nd)
Funders: Consejo Nacional de Investigaciones Científicas y Técnicas
Universidad de Buenos Aires (CONICET)
Topics: Life Sciences › Agricultural and Biological Sciences › Plant Science › Light effects on plants
Life Sciences › Agricultural and Biological Sciences › Plant Science › Plant Parasitism and Resistance
Life Sciences › Agricultural and Biological Sciences › Plant Science › Plant Molecular Biology Research
Keywords: shade avoidance, photoreceptors, phytochrome, cryptochrome, phototropin, UVR8, phytochrome-interacting factors, DELLA proteins, gibberellin signaling, brassinosteroid signaling, auxin biosynthesis, COP1, circadian clock, red:far-red ratio, plant light signaling, canopy light environment
MeSH terms: Gibberellins, Light, Phytochrome, Plant Growth Regulators, Plants, Signal Transduction, Ecosystem, Photoreceptors, Plant

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Photoreceptor Signaling Networks in Plant Responses to Shade

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