The Glyoxylate Shunt, 60 Years On

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Lysine Acetylation Is a Highly Abundant and Evolutionarily Conserved Modification in Escherichia Coli

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Carbon Sources Tune Antibiotic Susceptibility in Pseudomonas aeruginosa via Tricarboxylic Acid Cycle Control

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3-Nitropropionate, the toxic substance of Indigofera , is a suicide inactivator of succinate dehydrogenase

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Adaption and Degradation Strategies of Methylotrophic 1,4-Dioxane Degrading Strain Xanthobacter sp. YN2 Revealed by Transcriptome-Scale Analysis

Wang, Y., Ma, F., Yang, J., Guo, H., Su, D., & Yu, L. (2021) · International Journal of Molecular Sciences · doi:10.3390/ijms221910435 · Cited by 6

Evolutionary Adaptations of IRG1 Refines Itaconate Synthesis and Mitigates Innate Immunometabolism Trade-offsPreprint

Szeligowski, R. V., Miros, F. N., Saez, A., DeCiucis, M., Wagner, G. P., & Shen, H. (2022) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2022.06.17.496652 · Cited by 6

A Key Metabolic Protein in Active Mycobacterium tuberculosis: Insights into Carbon, Nitrogen, and Sulfur Metabolism

Farnia, P., Velayati, A. A., Ghanavi, J., & Farnia, P. (2025) · Advances in experimental medicine and biology · doi:10.1007/978-3-031-96883-9_6 · Cited by 5

Mycobacterium tuberculosis Rv1916 is an Acetyl‐CoA‐Binding Protein

Huang, E. Y., Kwai, B. X. C., Bhusal, R. P., Bashiri, G., & Leung, I. K. H. (2023) · ChemBioChem · doi:10.1002/cbic.202300162 · Cited by 4

Low and high nucleic acid content bacteria play discrepant roles in response to various carbon supply modes

Zhang, H., Hu, W., Liu, R., Bartlam, M. G., & Wang, Y. (2023) · Environmental Microbiology · doi:10.1111/1462-2920.16539 · Cited by 5

Within-host evolution of a transcriptional regulator contributes to the establishment of chronic Pseudomonas aeruginosa infection

Zhou, N., Yu, J., Liu, X., Li, C., Tang, H., Lyu, L., Wu, C., Chen, Y., Zhang, J., Ni, J., et al. (2025) · Cell Reports · doi:10.1016/j.celrep.2024.115214 · Cited by 4

Hfq balances energetic efficiency and antibiotic persistence in Acinetobacter baumannii

Sett, A., Hussain, A., Tomar, S. R., Ray, A. K., & Pathania, R. (2025) · mSystems · doi:10.1128/msystems.00320-25 · Cited by 4

Mutants lacking global regulators, fis and arcA, in Escherichia coli enhanced growth fitness under acetate metabolism by pathway reprogramming

Jindal, S., Iyer, M. S., Jyoti, P., Masakapalli, S. K., & Venkatesh, K. V. (2022) · Applied Microbiology and Biotechnology · doi:10.1007/s00253-022-11890-6 · Cited by 4

The glyoxylate shunt protein ICL-1 protects from mitochondrial superoxide stress through activation of the mitochondrial unfolded protein response

Wang, G., Laranjeiro, R., LeValley, S., Raamsdonk, J. M. V., & Driscoll, M. (2023) · Free Radical Biology and Medicine · doi:10.1016/j.freeradbiomed.2023.09.029 · Cited by 3

Feedstock-Efficient Conversion through Hydrogen and Formate-Driven Metabolism in Escherichia coli

Bertrand, R. L., Panich, J., Cowan, A. E., Roberts, J. B., Rodriguez, L. J., Artier, J., Toppari, E., Baidoo, E. E. K., Chen, Y., Petzold, C. J., et al. (2025) · Metabolic Engineering · doi:10.1016/j.ymben.2025.10.003 · Cited by 4

Major contribution of anaplerosis to inorganic carbon fixation in the dark ocean

Amano, C., Willhelm, U., Koch, T., Reinthaler, T., Hansman, R. L., Sintes, E., Herndl, G. J., González, J. M., & Baltar, F. (2026) · Nature Geoscience · doi:10.1038/s41561-026-02013-1 · Cited by 3

An efficient microbial secretion platform for developing supercharged polypeptides-based functional materials from C2 feedstock

Sun, J., Yu, X., Li, J., Xue, Z., Liu, K., & Zhang, C. (2025) · Chemical Engineering Journal · doi:10.1016/j.cej.2025.165683 · Cited by 3

Experimental evidence of the anti-bacterial activity pathway of copper ion treatment on Mycobacterium avium subsp. paratuberculosis

Tejeda, C., Villegas, M., Steuer, P., Ulloa, F., Iranzo, E. C., Reyes-Jara, A., & Salgado, M. (2022) · Brazilian Journal of Microbiology · doi:10.1007/s42770-022-00897-w · Cited by 3

Reversal of carbapenem resistance in Pseudomonas aeruginosa by camelid single domain antibody fragment (VHH) against the C4-dicarboxylate transporter

Nagraj, A. K., Shukla, M., Kulkarni, M., Patil, P. R., Borgave, M., & Banerjee, S. K. (2024) · The Journal of Antibiotics · doi:10.1038/s41429-024-00748-w · Cited by 3

Study of peripheral domains in structure–function of isocitrate lyase (ICL) from Pseudomonas aeruginosa

Díaz-Pérez, A. L., Díaz‐Pérez, C., Gaona-García, R. Y., Hernández‐Santoyo, A., Lázaro-Mixteco, P. E., de la Cruz, H. R., & Campos‐García, J. (2023) · World Journal of Microbiology and Biotechnology · doi:10.1007/s11274-023-03768-0 · Cited by 2

Polymicrobial detection and salivary metabolomics of children with early childhood caries

Pan, T. J., Ren, Y., Li, J., Liao, Y., & Xing, X. (2025) · PeerJ · doi:10.7717/peerj.19399 · Cited by 2

Metabolic engineering and metabolomics based profiling of cyanobacteria for enhanced succinate production

Srivastava, M., & Wangikar, P. P. (2025) · Algal Research · doi:10.1016/j.algal.2025.104286 · Cited by 2

Redefining HexR regulatory landscape in Pseudomonas putida KT2440 through integrative systems biology

Nong, L. K., Sathesh‐Prabu, C., Lee, S. K., & Kim, D. (2025) · Metabolic Engineering · doi:10.1016/j.ymben.2025.11.014 · Cited by 2

Metabolic Engineering of Escherichia coli for Fumarate Production from Ethanol

Liu, J., Liu, M., Chen, G., Feng, X., Ji, M., Bao, Z., Zhang, R., Xian, M., & Zhao, G. (2026) · ACS Synthetic Biology · doi:10.1021/acssynbio.5c00826 · Cited by 2

Synthetic biology optimizes carbon conservation and carbon fixation during microbial carbon metabolism

Gao, H., Wang, Q., & Qi, Q. (2023) · Chinese Science Bulletin (Chinese Version) · doi:10.1360/tb-2022-1135 · Cited by 2

Significant alteration of protein profiles in a mouse model of polycystic ovary syndrome

Meng, B., Yang, X., Luo, S., Shen, C., Jia, Q., Zhang, H., Li, Y., Xue, Y., Zhao, J., Qu, P., et al. (2023) · Molecular Reproduction and Development · doi:10.1002/mrd.23720 · Cited by 2

Decoding E. coli ’s Gut Survival Strategies: A CRISPRi Approach Across Diets, Inflammatory Environment and StrainsPreprint

Maire, A., Tkacz, E., Ortelli, M., Dehio, C., Chassaing, B., Sokol, H., Rolhion, N., & Bikard, D. (2026) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.64898/2026.01.05.697630 · Cited by 2

Metabolomics of susceptible and insecticide-resistant strains of Spodoptera frugiperda (Lepidoptera: Noctuidae) and metatranscriptomics of their midgut-associated microbiota

Gomes, A. F. F., Cataldi, T. R., Labate, C. A., Omoto, C., & Cônsoli, F. L. (2025) · Pesticide Biochemistry and Physiology · doi:10.1016/j.pestbp.2025.106697 · Cited by 1

Shaping DOM Signatures in East Antarctic Lakes: Penguins, Mosses, Meltwater, and Processing Mechanisms

McDonough, L. K., Holt, A. D., Hamilton, E., Randall, K. L., Saunders, K. M., Robinson, S. A., Spencer, R. G. M., Mckenna, A. M., Linnenlucke, L., & Meredith, K. (2025) · Journal of Geophysical Research Biogeosciences · doi:10.1029/2025jg008931 · Cited by 1

Genome-wide evolutionary selection pressures acting on Pseudomonas aeruginosa residing in different environments

Ho, P.-M., Nazeer, R. R., & Welch, M. (2025) · NAR Molecular Medicine · doi:10.1093/narmme/ugaf040 · Cited by 1

A Rapid Nanobody Based Approach for Developing Antimicrobials Against Drug-resistant Bacteria and Yeasts

Banerjee, S. K., Patil, P. R., Babu, A. S., Nada, R., Naik, G., & Shukla, M. (2025) · BioNanoScience · doi:10.1007/s12668-025-02304-8 · Cited by 1

Molecular insights into polyurethane biodegradation in Pseudomonas protegens

Semenec, L., Maharjan, R. P., Rajabal, V., Tay, A. P., Xu, X., Lott, H., Facey, F. S. B., Dinh, H., Tetu, S. G., Williams, T. C., et al. (2026) · mBio · doi:10.1128/mbio.03544-25 · Cited by 1

Mechanism-guided control of intracellular alkalinization and process pH for production of recombinant human B-type natriuretic peptide under the cSAT scheme in Escherichia coli

Nie, H., Feng, Y., Sun, G., Li, H., Kang, J., Zhang, Y., Zhu, C., Mi, Y., Guo, Y., & Ma, P. (2026) · Microbial Cell Factories · doi:10.1186/s12934-026-02938-7 · Cited by 1

An integrated computational-experimental approach identifies Malate Synthase G as therapeutic target to disrupt carbon metabolism in chronic Pseudomonas aeruginosa infection

Chen, G., Tan, Q., Zhou, H., Wang, R., Mo, J., Xu, J., & Chen, W. (2026) · Functional & Integrative Genomics · doi:10.1007/s10142-026-01889-x · Cited by 1

Characterization of a Periplasmic D-Malate:Cytochrome c Oxidoreductase from Ectopseudomonas oleovorans CECT 5344 and Its Role in Extracytoplasmic Respiration and Cyanide Detoxification

Merchán, F., Población, A. G., Guijo, M. I., Gómez-Ortega, M., Morales-Durán, F., Alonso-Ríos, I., Sánchez‐Clemente, R., & Blasco, R. (2025) · International Journal of Molecular Sciences · doi:10.3390/ijms26146575 · Cited by 1

Small molecule resensitizes Salmonella to itaconate and decreases bacterial proliferation in macrophagesPreprint

Duncan, D., Chang, J. H., Artyomov, M. N., & Auclair, K. (2020) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2020.07.15.204305 · Cited by 1

Assessment of antibiotic resistance in soil and its link to different land use types and intensities

Willms, I. M. (2020) · doi:10.53846/goediss-8102 · Cited by 1

Caloric Restriction Remodels Energy Metabolic Pathways of Gut Microbiota and Promotes Host AutophagyPreprint

Yang, Y., Chen, S., Liu, Y., Hou, Y., Xie, X., Zhang, X., Zhao, A., Zheng, X., Liu, J., Chen, T., et al. (2020) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2020.08.16.251215 · Cited by 3

Mutant strains of Escherichia coli lacking global regulators, arcA and fis , demonstrate better growth fitness by pathway reprogramming under acetate metabolismPreprint

Jindal, S., Iyer, M. S., Jyoti, P., Masakapalli, S. K., & Venkatesh, K. V. (2021) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2021.06.24.449759 · Cited by 1

A hybrid nitrogenase with regulatory elasticity in Azotobacter vinelandiiPreprint

Rivier, A. J., Myers, K. S., Garcia, A. K., Sobol, M. S., & Kaçar, B. (2023) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2023.06.02.543473 · Cited by 1

Genomics of insecticide-metabolizing bacteria associated with Spodoptera frugiperda (Lepidoptera: Noctuidae) and their potential role in host detoxification

Gomes, A. F. F. (2024) · doi:10.11606/t.11.2024.tde-13032024-153828 · Cited by 1

The hidden prevalence and unique protein folds of huge phages

Chen, L.-X. (2025) · doi:10.55277/researchhub.und55jo4.1 · Cited by 1

Evolutionary Adaptations of IRG1 Refines Itaconate Synthesis and Mitigates Innate Immunometabolism Trade-offsPreprint

Szeligowski, R. V., Miros, F. N., Saez, A., DeCiucis, M., Wagner, G. P., & Shen, H. (2025) · eLife · doi:10.7554/elife.108012 · Cited by 1

Actuation of CRP activating region 3 by acetylation modulates V. cholerae sugar utilization and virulencePreprint

Santos, R., Gibson, J. A., Basu, P., Gebhardt, M. J., Akut, C., Robins, W. P., Mekalanos, J. J., Dove, S. L., & Watnick, P. I. (2026) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.64898/2026.01.27.701997 · Cited by 1

Molecular Insight into the Allocation of Organic Carbon to Heterotrophic Bacteria: Carbon Metabolism and the Involvement in Nitrogen and Phosphorus RemovalPreprint

Sui, Q., Fei, D., Zhong, H., Chen, M., & Wei, Y. (2024) · SSRN Electronic Journal · doi:10.2139/ssrn.4777298

A rapid non-traditional approach for developing biologicals against drug-resistant bacteria and yeastsPreprint

Banerjee, S. K., Patil, P. R., Suresh, A., Nada, R., Naik, G., & Shukla, M. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2025.03.15.643420

Evolutionary Adaptations of IRG1 Refines Itaconate Synthesis and Mitigates Innate Immunometabolism Trade-offsPreprint

Szeligowski, R. V., Miros, F. N., Saez, A., DeCiucis, M., Wagner, G. P., & Shen, H. (2025) · eLife · doi:10.7554/elife.108012.1

Additional file 2 of Production of succinate by engineered strains of Synechocystis PCC 6803 overexpressing phosphoenolpyruvate carboxylase and a glyoxylate shunt

Durall, C., Kukil, K., Hawkes, J. A., Albergati, A., Lindblad, P. C., & Lindberg, P. (2021) · Figshare · doi:10.6084/m9.figshare.13787235

Additional file 2 of Reconstruction of the last bacterial common ancestor from 183 pangenomes reveals a versatile ancient core genome

Hyun, J. C., & Palsson, B. O. (2024) · Figshare · doi:10.6084/m9.figshare.26609241

Additional file 4 of Production of succinate by engineered strains of Synechocystis PCC 6803 overexpressing phosphoenolpyruvate carboxylase and a glyoxylate shunt

Durall, C., Kukil, K., Hawkes, J. A., Albergati, A., Lindblad, P. C., & Lindberg, P. (2021) · Figshare · doi:10.6084/m9.figshare.13787241

Additional file 5 of Production of succinate by engineered strains of Synechocystis PCC 6803 overexpressing phosphoenolpyruvate carboxylase and a glyoxylate shunt

Durall, C., Kukil, K., Hawkes, J. A., Albergati, A., Lindblad, P. C., & Lindberg, P. (2021) · Figshare · doi:10.6084/m9.figshare.13787244

Additional file 7 of Reconstruction of the last bacterial common ancestor from 183 pangenomes reveals a versatile ancient core genome

Hyun, J. C., & Palsson, B. O. (2024) · Figshare · doi:10.6084/m9.figshare.26609256

Additional file 5 of Reconstruction of the last bacterial common ancestor from 183 pangenomes reveals a versatile ancient core genome

Hyun, J. C., & Palsson, B. O. (2024) · Figshare · doi:10.6084/m9.figshare.26609250

Additional file 1 of Reconstruction of the last bacterial common ancestor from 183 pangenomes reveals a versatile ancient core genome

Hyun, J. C., & Palsson, B. O. (2024) · Figshare · doi:10.6084/m9.figshare.26609238

Additional file 3 of Reconstruction of the last bacterial common ancestor from 183 pangenomes reveals a versatile ancient core genome

Hyun, J. C., & Palsson, B. O. (2024) · Figshare · doi:10.6084/m9.figshare.26609244

Additional file 3 of Production of succinate by engineered strains of Synechocystis PCC 6803 overexpressing phosphoenolpyruvate carboxylase and a glyoxylate shunt

Durall, C., Kukil, K., Hawkes, J. A., Albergati, A., Lindblad, P. C., & Lindberg, P. (2021) · Figshare · doi:10.6084/m9.figshare.13787238

Additional file 1 of Disinfection exhibits systematic impacts on the drinking water microbiome

Dai, Z., Sevillano, M., Calus, S., Santos, Q. M. B.-D. L., Eren, A. M., van der Wielen, P. W. J. J., Ijaz, U. Z., & Pinto, A. J. (2020) · Figshare · doi:10.6084/m9.figshare.12015381

Additional file 4 of Reconstruction of the last bacterial common ancestor from 183 pangenomes reveals a versatile ancient core genome

Hyun, J. C., & Palsson, B. O. (2024) · Figshare · doi:10.6084/m9.figshare.26609247

Additional file 6 of Reconstruction of the last bacterial common ancestor from 183 pangenomes reveals a versatile ancient core genome

Hyun, J. C., & Palsson, B. O. (2024) · Figshare · doi:10.6084/m9.figshare.26609253

Additional file 1 of Production of succinate by engineered strains of Synechocystis PCC 6803 overexpressing phosphoenolpyruvate carboxylase and a glyoxylate shunt

Durall, C., Kukil, K., Hawkes, J. A., Albergati, A., Lindblad, P. C., & Lindberg, P. (2021) · Figshare · doi:10.6084/m9.figshare.13787232

1-Amino-but-3-enes scavenge formaldehyde and glyoxylic acid

Bulman, N. F. A., Emms, V. L., Thomas, L. A., Beja, L., & Hopkinson, R. J. (2026) · Communications Chemistry · doi:10.1038/s42004-025-01873-9

Redirecting linear hydrocarbon metabolism toward polyhydroxyalkanoate biosynthesis

Palacios-Ferrer, R., Manoli, M., Godoy, P., Delgado, A. R., Prieto, A., & Ramos, J. L. (2026) · Microbial Cell Factories · doi:10.1186/s12934-025-02914-7

Rapid Changes in Transcription During a Feast-Famine EventPreprint

Dijkstra, P., Hungate, B. A., Pett‐Ridge, J., Blazewicz, S. J., Ceja-Navarro, J. A., Morrissey, E. M., Chuckran, P. F., & Schwartz, E. (2026) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.64898/2026.02.04.703792

Detergents without a drain: the evolutionary logic (and liability) of sphingolipids

Summers, S. A. (2026) · Journal of Lipid Research · doi:10.1016/j.jlr.2026.100998

Rapid Changes in Transcription During a Feast-Famine EventPreprint

Dijkstra, P., Hungate, B. A., Pett‐Ridge, J., Blazewicz, S. J., Ceja-Navarro, J. A., Morrissey, E. M., Chuckran, P. F., & Schwartz, E. (2026) · SSRN Electronic Journal · doi:10.2139/ssrn.6292274

From genome to lifestyle: adaptive strategies of Pseudomonas sp. AU10 and its Antarctic lineage

García-Laviña, C. X., Smircich, P., & Castro‐Sowinski, S. (2026) · Applied and Environmental Microbiology · doi:10.1128/aem.02470-25

The interplay between Fe-limitation, carbon and light in a (photo)heterotrophic bacterium

Koedooder, C. (2019) · doi:10.70675/ca42908fzb6adz4153za5cez98338b493016

Hexokinase et glucokinases chez la levure pathogène Candida albicans : implication dans la physiologie et la virulence

Laurian, R. (2020) · theses.fr (ABES) · doi:10.70675/06eaf72ez4a03z401cz9357z6329615ccd34

Degradation of exogenous fatty acids in Escherichia coli

Pavoncello, V. (2022) · doi:10.70675/3425d9aczcc1az4b33za3c6z5b17678850bf

Ajustements du métabolisme primaire dans les tissus foliaires du colza en lien avec les relations sources/puits et la carence en eau (Brassica napus L.)

Aubert, M. (2024) · doi:10.70675/8111effdzf848z4461z98c1z8c930c01f27a

The yeast mitochondrial porin represses Snf1/AMP kinase signaling to attenuate viral replication

Chau, S., Marek, S., Khanna, A., Sathe, J., Laxman, S., & Meneghini, M. D. (2026) · Genetics · doi:10.1093/genetics/iyag106

C3-aminomethylation of 7-aminopyrazolo[1,5-a]pyrimidine with glyoxylic acid monohydrate and amines under catalyst-free conditions

Yang, J., Pang, T., Wang, W., LIU, Y. F., He, J., Liu, P., & Liu, P. (2026) · Tetrahedron · doi:10.1016/j.tet.2026.135321

Engineering Escherichia coli to use formate and CO2 as carbon sources for the synthesis of succinic acid in a two-stage fermentation

Liu, Y., Niu, X., Zhang, X., Song, W., Xu, S., Wang, X., Feng, J., & Chen, K. (2026) · Chemical Engineering Journal · doi:10.1016/j.cej.2026.177153

Biological valorization of non-food feedstocks: A critical review

Guo, Q., Wei, Y., Wang, F., Zhao, S., Song, G., Zhao, K., & Liu, R. (2026) · Biotechnology Advances · doi:10.1016/j.biotechadv.2026.108918

LysR-type transcriptional regulator TtdR regulates both ethylene glycol and polyhydroxyalkanoate (PHA) metabolism in Pseudomonas umsongensis GO16

Um, J., Balusamy, K., Wierckx, N. J. P., O'Connor, K. E., & Narančić, T. (2026) · Applied Microbiology and Biotechnology · doi:10.1007/s00253-026-13865-3

Exploratory Analysis of Rhizosphere Bacterial Communities in Two Brazilian Eucalyptus Plantation Systems Suggests Taxonomic Turnover with Conserved Functional Potential

Cortivo, P. R. D., de Souza, U. J. B., Zarpelon, T. G., Borges, N., Gabev, E. E., Campos, F. S., & Filho, R. L. (2026) · Microbiology Research · doi:10.3390/microbiolres17060107

Rapid changes in transcription during a feast-famine event

Dijkstra, P., Hungate, B. A., Pett‐Ridge, J., Blazewicz, S. J., Ceja-Navarro, J. A., Morrissey, E. M., Chuckran, P. F., & Schwartz, E. (2026) · Soil Biology and Biochemistry · doi:10.1016/j.soilbio.2026.110208

Electroactive FeMn-C carriers enhance C-N-P removal in low-temperature IFAS sewage treatment system via microbial regulation and metabolic reprogramming

Wang, Y., Li, Y., Yi, C., Qiu, Y., & Feng, Y. (2026) · Chemical Engineering Journal · doi:10.1016/j.cej.2026.178458

Metabolic engineering of Yarrowia lipolytica Po1f for efficient production of citric acid

Fang, H., Han, J., Fan, L., Liang, J. S., Feng, L. I. U., & Zhao, C. (2026) · Chemical Engineering Science · doi:10.1016/j.ces.2026.124512

Succinate and lactate produced as conserved biomarkers through chronic and transient substrate-level phosphorylation: from microorganisms to cancer

Lee, D. C., Duraj, T., Chinopoulos, C., & Seyfried, T. N. (2026) · Journal of Bioenergetics and Biomembranes · doi:10.1007/s10863-026-10117-x

Transcriptomic insights into the mode of action of carvacrol against copper-resistant Xanthomonas euvesicatoria pv. perforans reveals impairment of copper resistance pathway alongside widespread metabolic shiftsPreprint

Jibrin, M. O., Najar, F. Z., Liu, Q., Yu, F., Bello, U. R., Fomba, J. A., Zhang, Y., Jones, J. B., & Zhang, S. (2026) · Research Square · doi:10.21203/rs.3.rs-10083928/v1

Complete genome sequence and nitrogen metabolic potential of Stutzerimonas frequens GUA-1 isolated from coastal sediment

Yang, X., Hu, G., Yi, X., Liu, Y., & Zhou, H. (2026) · Marine Genomics · doi:10.1016/j.margen.2026.101267

Soil microbiome metabolisms stimulated by drought and rewetting inferred from multi-omics and metabolic modelingPreprint

Lipton, M. S. W., Nelson, W. C., McCullough, H. C., Smith, M. L., Bell, S. L., Bramer, L., Song, H., & Hofmockel, K. (2026) · SSRN Electronic Journal · doi:10.2139/ssrn.7288358

Actuation of CRP activating region 3 by formylation modulates the Vibrio cholerae response to oxidative DNA damage

Santos, R. E. R. D. S., Basu, P., O’Hara, B. J., Gibson, J. A., Gebhardt, M. J., Akut, C., Robins, W. P., Mekalanos, J. J., Dove, S. L., & Watnick, P. I. (2026) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.2602861123

Metabolic adaptation to TCA cycle deficiency in a strictly aerobic bacteriumPreprint

Liu, C., Toivanen, E., Santala, S., Luo, J., & Santala, V. P. (2026) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.64898/2026.09.17.752348

Sodium borohydride-induced artifact formation of Nε-carboxymethyllysine (CML) in pork meat containing glyoxylic acid as a CML precursor: implications for reduction-based sample pretreatment

Barbosa, M. T. M., Delgado, J. G. A., Wróbel, K., Escobosa, A. R. C., Donis, I. E., Esperanza, M. G., & Wróbel, K. (2026) · European Food Research and Technology · doi:10.1007/s00217-026-05319-x

Distinct lignocellulose degradation strategies of white- and brown-rot fungi in thermally modified Scots pine wood

Cui, D., Zhao, X., Ji, X., Kong, J., Zhou, M., & Cao, J. (2026) · Industrial Crops and Products · doi:10.1016/j.indcrop.2026.124520

Interfacial reaction-network catalysis: steering complex transformations through physical mixing

Tian, G., Wang, Z., Zhang, C., Dai, B., & Wei, F. (2026) · Chemical Society Reviews · doi:10.1039/d6cs00516k · Cited by 1

Biomanufacturing of Succinic Acid

Xi, Y., Zhu, X., Xu, H., Tang, J., Zhan, T., Fan, F., & Zhang, X. (2026) · Advances in biochemical engineering, biotechnology · doi:10.1007/10_2026_343

Glyoxylate pathway as a metabolic switch driving biofilm persistence and stress adaptation

Machra, M., & Tiwari, V. (2026) · The Microbe · doi:10.1016/j.microb.2026.100822

Determination of flux through the branch point of two metabolic cycles. The tricarboxylic acid cycle and the glyoxylate shunt.

Walsh, K., & Koshland, D. E. (1984) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(17)42750-5 · Cited by 175

Growth-rate-independent production of recombinant glucoamylase byFusarium venenatum JeRS 325

Wiebe, M. G., Robson, G. D., Shuster, J. R., & Trinci, A. P. J. (2000) · Biotechnology and Bioengineering · doi:10.1002/(sici)1097-0290(20000505)68:3 · Cited by 20

Three enzymes and one substrate; regulation of flux through the glyoxylate shunt in the opportunistic pathogen, Pseudomonas aeruginosaPreprint

Crousilles, A., Dolan, S. K., Brear, P., Chirgadze, D. Y., & Welch, M. (2018) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/318345

Balancing the carbon flux distributions between the TCA cycle and glyoxylate shunt to produce glycolate at high yield and titer in Escherichia coli

Deng, Y., Ma, N., Zhu, K., Mao, Y., Wei, X., & Zhao, Y. (2018) · Metabolic Engineering · doi:10.1016/j.ymben.2018.02.008 · Cited by 87

The role and control of the glyoxylate cycle in Escherichia coli

Kornberg, H. L. (1966) · Biochemical Journal · doi:10.1042/bj0990001 · Cited by 608