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The SMARCA2/4 ATPase Domain Surpasses the Bromodomain as a Drug Target in SWI/SNF-Mutant Cancers: Insights from cDNA Rescue and PFI-3 Inhibitor Studies
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Abstract
The SWI/SNF multisubunit complex modulates chromatin structure through the activity of two mutually exclusive catalytic subunits, SMARCA2 and SMARCA4, which both contain a bromodomain and an ATPase domain. Using RNAi, cancer-specific vulnerabilities have been identified in SWI/SNF-mutant tumors, including SMARCA4-deficient lung cancer; however, the contribution of conserved, druggable protein domains to this anticancer phenotype is unknown. Here, we functionally deconstruct the SMARCA2/4 paralog dependence of cancer cells using bioinformatics, genetic, and pharmacologic tools. We evaluate a selective SMARCA2/4 bromodomain inhibitor (PFI-3) and characterize its activity in chromatin-binding and cell-functional assays focusing on cells with altered SWI/SNF complex (e.g., lung, synovial sarcoma, leukemia, and rhabdoid tumors). We demonstrate that PFI-3 is a potent, cell-permeable probe capable of displacing ectopically expressed, GFP-tagged SMARCA2-bromodomain from chromatin, yet contrary to target knockdown, the inhibitor fails to display an antiproliferative phenotype. Mechanistically, the lack of pharmacologic efficacy is reconciled by the failure of bromodomain inhibition to displace endogenous, full-length SMARCA2 from chromatin as determined by in situ cell extraction, chromatin immunoprecipitation, and target gene expression studies. Furthermore, using inducible RNAi and cDNA complementation (bromodomain- and ATPase-dead constructs), we unequivocally identify the ATPase domain, and not the bromodomain of SMARCA2, as the relevant therapeutic target with the catalytic activity suppressing defined transcriptional programs. Taken together, our complementary genetic and pharmacologic studies exemplify a general strategy for multidomain protein drug-target validation and in case of SMARCA2/4 highlight the potential for drugging the more challenging helicase/ATPase domain to deliver on the promise of synthetic-lethality therapy. Cancer Res; 75(18); 3865–78. ©2015 AACR.
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“In all cases, the targeted proteins also harbored multiple other functional domains and are often participating in intricate protein–protein interactions that appeared to be bromodomain independent.”
From Advancing Targeted Protein Degradation via Multiomics Profiling and Artificial Intelligence (2023) · cites this paper as [21]
In the citing paper
“While these efforts culminated in potent, specific, and well-characterized ligands for the individual bromodomains, ensuing functional analyses revealed that they are largely lacking cellular efficacy.21”
From Advancing Targeted Protein Degradation via Multiomics Profiling and Artificial Intelligence (2023) · cites this paper as [21]
In the citing paper
“However, such inhibitors have failed to inhibit tumor cell growth [48] because the ATPase domain but not the bromodomain is essential for tumor cell growth [169].”
From Proteolysis targeting chimeras (PROTACs) are emerging therapeutics for hematologic malignancies (2020) · cites this paper as [169]
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Cites
A small molecule–kinase interaction map for clinical kinase inhibitors
Fabian, M. A., Biggs, W., Treiber, D. K., Atteridge, C. E., Azimioara, M. D., Benedetti, M. G., Carter, T. A., Ciceri, P., Edeen, P. T., Floyd, M. B., et al. (2005) · Nature Biotechnology · doi:10.1038/nbt1068 · Cited by 1,923
RNAi screen identifies Brd4 as a therapeutic target in acute myeloid leukaemia
Zuber, J., Shi, J., Wang, E., Rappaport, A. R., Herrmann, H., Sison, E. A., Magoon, D., Qi, J., Blatt, K., Wunderlich, M., et al. (2011) · Nature · doi:10.1038/nature10334 · Cited by 1,870
Neuwald, A. F., Aravind, L., Spouge, J. L., & Koonin, E. V. (1999) · Genome Research · doi:10.1101/gr.9.1.27 · Cited by 1,840
Histone Recognition and Large-Scale Structural Analysis of the Human Bromodomain Family
Filippakopoulos, P., Picaud, S., Mangos, M., Keates, T., Lambert, J., Baršytė-Lovejoy, D., Felletár, I., Volkmer, R., Müller, S., Pawson, T. J., et al. (2012) · Cell · doi:10.1016/j.cell.2012.02.013 · Cited by 1,759
ARID1A Mutations in Endometriosis-Associated Ovarian Carcinomas
Wiegand, K. C., Shah, S. P., Al-Agha, O. M., Zhao, Y., Tse, K., Zeng, T., Senz, J., McConechy, M. K., Anglesio, M. S., Kalloger, S. E., et al. (2010) · New England Journal of Medicine · doi:10.1056/nejmoa1008433 · Cited by 1,712
Kadoch, C., Hargreaves, D. C., Hodges, H. C., Elias, L., Ho, L., Ranish, J. A., & Crabtree, G. R. (2013) · Nature Genetics · doi:10.1038/ng.2628 · Cited by 1,493
Lessons from the Cancer Genome
Garraway, L. A., & Lander, E. S. (2013) · Cell · doi:10.1016/j.cell.2013.03.002 · Cited by 1,377
SWI/SNF nucleosome remodellers and cancer
Wilson, B. G., & Roberts, C. W. M. (2011) · Nature reviews. Cancer · doi:10.1038/nrc3068 · Cited by 1,325
Exome sequencing identifies frequent mutation of the SWI/SNF complex gene PBRM1 in renal carcinoma
Varela, I., Tarpey, P. S., Raine, K. M., Huang, D., Ong, C. K., Stephens, P., Davies, H. R., Jones, D., Lin, M., Teague, J. W., et al. (2011) · Nature · doi:10.1038/nature09639 · Cited by 1,302
Targeting bromodomains: epigenetic readers of lysine acetylation
Filippakopoulos, P., & Knapp, S. (2014) · Nature Reviews Drug Discovery · doi:10.1038/nrd4286 · Cited by 1,298
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Li, N., Liu, H. S., Xue, Y., Xu, Z., Miao, X., Guo, Y., Li, Z., Fan, Z., & Xu, Y. (2023) · EMBO Molecular Medicine · doi:10.15252/emmm.202216592 · Cited by 38
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Brg1 promotes liver fibrosis via activation of hepatic stellate cells
Li, H., Lan, J., Han, C., Guo, K., Wang, G., Hu, J., Gong, J., Luo, X., & Cao, Z. (2018) · Experimental Cell Research · doi:10.1016/j.yexcr.2018.02.003 · Cited by 38
Rago, F., DiMare, M. T., Elliott, G., Ruddy, D. A., Sovath, S., Kerr, G., Bhang, H. C., & Jagani, Z. (2018) · Biochemical and Biophysical Research Communications · doi:10.1016/j.bbrc.2018.09.009 · Cited by 35
PROTAC: targeted drug strategy. Principles and limitations
Koroleva, O. A., Dutikova, Y. V., Trubnikov, A. V., Zenov, F. A., Manasova, E. V., Shtil, A. A., & Kurkin, A. V. (2022) · Russian Chemical Bulletin · doi:10.1007/s11172-022-3659-z · Cited by 38
Sharma, T., Robinson, D. C. L., Witwicka, H., Dilworth, F. J., & Imbalzano, A. N. (2021) · Nucleic Acids Research · doi:10.1093/nar/gkab617 · Cited by 36
Li, Z., Zhao, Q., Lu, Y., Zhang, Y., Li, L., Li, M., Chen, X., Sun, D., Duan, Y., & Xu, Y. (2021) · Advanced Science · doi:10.1002/advs.202101957 · Cited by 34
Selectively targeting individual bromodomain: Drug discovery and molecular mechanisms
Wang, Q., Shao, X., Leung, E. L., Chen, Y., & Yao, X. (2021) · Pharmacological Research · doi:10.1016/j.phrs.2021.105804 · Cited by 34
Lu, T., Hu, J., Lu, W., Han, J., Ding, H., Jiang, H., Zhang, Y., Yue, L., Chen, S., Jiang, H., et al. (2018) · Acta Pharmacologica Sinica · doi:10.1038/aps.2017.188 · Cited by 33
The role of the SWI/SNF chromatin remodeling complex in pancreatic ductal adenocarcinoma
Tsuda, M., Fukuda, A., Kawai, M., Araki, O., & Seno, H. (2020) · Cancer Science · doi:10.1111/cas.14768 · Cited by 36
Chory, E. J., Kirkland, J. G., Chang, C.-Y., D’Andrea, V. D., Gourisankar, S. P., Dykhuizen, E. C., & Crabtree, G. R. (2020) · ACS Chemical Biology · doi:10.1021/acschembio.0c00312 · Cited by 33
Bromodomain-containing proteins in prostate cancer
Urbanucci, A., & Mills, I. G. (2017) · Molecular and Cellular Endocrinology · doi:10.1016/j.mce.2017.06.007 · Cited by 31
The BAF chromatin remodeling complexes: structure, function, and synthetic lethalities
Varga, J., Kube, M., Luck, K., & Schick, S. (2021) · Biochemical Society Transactions · doi:10.1042/bst20190960 · Cited by 31
Taylor, A. M., Bailey, C., Belmont, L. D., Campbell, R., Cantone, N. R., Côté, A., Crawford, T. D., Cummings, R. T., DeMent, K., Duplessis, M., et al. (2022) · Journal of Medicinal Chemistry · doi:10.1021/acs.jmedchem.2c00662 · Cited by 28
(mis)-Targeting of SWI/SNF complex(es) in cancer
Reddy, D., Bhattacharya, S., & Workman, J. L. (2023) · Cancer and Metastasis Reviews · doi:10.1007/s10555-023-10102-5 · Cited by 30
Mutual Regulation of ncRNAs and Chromatin Remodeling Complexes in Normal and Pathological Conditions
Bure, I. V., & Nemtsova, M. V. (2023) · International Journal of Molecular Sciences · doi:10.3390/ijms24097848 · Cited by 27
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Mancarella, C., Morrione, A., & Scotlandi, K. (2023) · International Journal of Molecular Sciences · doi:10.3390/ijms242216346 · Cited by 28
The Bromodomain Inhibitor PFI-3 Sensitizes Cancer Cells to DNA Damage by Targeting SWI/SNF
Lee, D., Lee, D.-Y., Hwang, Y.-S., Seo, H.-R., Lee, S.-A., & Kwon, J. (2020) · Molecular Cancer Research · doi:10.1158/1541-7786.mcr-20-0289 · Cited by 28
Chemical probes targeting epigenetic proteins: Applications beyond oncology
Ackloo, S. Z., Brown, P. J., & Müller, S. (2017) · Epigenetics · doi:10.1080/15592294.2017.1279371 · Cited by 27
Peng, C., Song, Y., Chen, W., Wang, X., Liu, X., Wang, F., Wu, D., Ma, S., Wang, X., & Gao, C. (2018) · International Journal of Oncology · doi:10.3892/ijo.2018.4312 · Cited by 26
SMARCAL1 , the annealing helicase and the transcriptional co‐regulator
Bansal, R., Hussain, S., Chanana, U. B., Bisht, D., Goel, I., & Muthuswami, R. (2020) · IUBMB Life · doi:10.1002/iub.2354 · Cited by 26
BRD9 is a druggable component of interferon-stimulated gene expression and antiviral activity
Börold, J., Eletto, D., Busnadiego, I., Mair, N. K., Moritz, E., Schiefer, S., Schmidt, N., Petric, P. P., Wong, W. W.-L., Schwemmle, M., et al. (2021) · EMBO Reports · doi:10.15252/embr.202152823 · Cited by 27
Kwak, C. S., Park, C., Ko, M., Im, C. Y., Moon, H., Park, Y.-H., Kim, S. Y., Lee, S.-Y., Kang, M., Kwon, H. J., et al. (2022) · Cell chemical biology · doi:10.1016/j.chembiol.2022.10.001 · Cited by 32
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Ye, W., An, D., & Ou, W. (2025) · Cancer Letters · doi:10.1016/j.canlet.2025.217811 · Cited by 25
Targeting of BRM Sensitizes BRG1 -Mutant Lung Cancer Cell Lines to Radiotherapy
Zernickel, E., Sak, A., Riaz, A., Klein, D., Groneberg, M., & Stuschke, M. (2018) · Molecular Cancer Therapeutics · doi:10.1158/1535-7163.mct-18-0067 · Cited by 25
Cancer epigenetic therapy: recent advances, challenges, and emerging opportunities
Vatapalli, R. J., Rossi, A. P., Chan, H. M., & Zhang, J. (2024) · Epigenomics · doi:10.1080/17501911.2024.2430169 · Cited by 28
Hulse, M., Wang, M., Xu, C., Carter, J., Agarwal, A., Lu, L., Pitis, P., Bhagwat, N., Rager, J. D., Kurian, J. J., et al. (2025) · Cancer Research · doi:10.1158/0008-5472.can-25-1141 · Cited by 26
Castro, J., Daniels, M. H., Brennan, D., Johnston, B., Gotur, D., Lee, Y., Knockenhauer, K. E., Lu, C., Wu, J., Nayak, S. P., et al. (2024) · Cancer Research · doi:10.1158/0008-5472.can-24-0397 · Cited by 23
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Ibrahim, S., Khan, M. U., Khurram, I., Rehman, R., Rauf, A., Ahmad, Z., Aljohani, A. S. M., Abdulmonem, W. A., & Quradha, M. M. (2025) · Food Science & Nutrition · doi:10.1002/fsn3.70011 · Cited by 27
Hong, W., Kong, M., Qi, M., Bai, H., Fan, Z., Zhang, Z., Sun, A., Fan, X., & Xu, Y. (2021) · Frontiers in Cell and Developmental Biology · doi:10.3389/fcell.2020.587502 · Cited by 23
Chong, P. S. Y., Chooi, J.-Y., Lim, J. S. L., Toh, S. H. M., Tan, T. Z., & Chng, W. J. (2021) · Cancer Research · doi:10.1158/0008-5472.can-20-2946 · Cited by 23
A New Way Forward in Cancer Drug Discovery: Inhibiting the SWI/SNF Chromatin Remodelling Complex
Zinzalla, G. (2016) · ChemBioChem · doi:10.1002/cbic.201500565 · Cited by 23
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Gurard‐Levin, Z. A., Wilson, L. O. W., Pancaldi, V., Postel-Vinay, S. C., Sousa, F. G., Réyès, C., Marangoni, E., Gentien, D., Valencia, A., Pommier, Y. G., et al. (2016) · Molecular Cancer Therapeutics · doi:10.1158/1535-7163.mct-15-1008 · Cited by 24
Degradation of the BAF Complex Factor BRD9 by Heterobifunctional Ligands
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Synthetic lethality in cancer drug discovery: challenges and opportunities
Gonçalves, E., Ryan, C. J., & Adams, D. J. (2025) · Nature Reviews Drug Discovery · doi:10.1038/s41573-025-01273-7 · Cited by 27
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Villemure, E., Januario, T., Zeng, M., Budayeva, H. G., Walters, B. T., Lictao, A., Li, K. S., Ye, X., Gilchrist, C. L., Hoag, B., et al. (2025) · Nature Communications · doi:10.1038/s41467-025-64669-4 · Cited by 22
Yang, C., Wang, Y., Sims, M. M., He, Y., Miller, D. D., & Pfeffer, L. M. (2021) · Pharmaceuticals · doi:10.3390/ph14090904 · Cited by 22
Bromodomain (BrD) Family Members as Regulators of Cancer Stemness—A Comprehensive Review
Czerwińska, P., & Mackiewicz, A. A. (2023) · International Journal of Molecular Sciences · doi:10.3390/ijms24020995 · Cited by 22
Liu, W., Wang, Z., Liu, S., Zhang, X., Cao, X., & Jiang, M. (2023) · Cell Reports · doi:10.1016/j.celrep.2023.112097 · Cited by 22
SMARCA2-regulated host cell factors are required for MxA restriction of influenza A viruses
Dornfeld, D., Dudek, A. H., Vausselin, T., Günther, S. C., Hultquist, J. F., Giese, S., Khokhlova-Cubberley, D., Chew, Y. C., Pache, L., Krogan, N. J., et al. (2018) · Scientific Reports · doi:10.1038/s41598-018-20458-2 · Cited by 22
Target 2035 – an update on private sector contributions
Ackloo, S. Z., Antolín, A. A., Bartolomé, J. M., Beck, H., Bullock, A. N., Betz, U. A. K., Böttcher, J., Brown, P. J., Chaturvedi, M., Crisp, A., et al. (2023) · RSC Medicinal Chemistry · doi:10.1039/d2md00441k · Cited by 20
Self-citationJolly, A., Lu, S., Dubner, A., Strand, K. A., Mutryn, M. F., Pilotti-Riley, A., Danis, E. P., Nemenoff, R. A., Moulton, K. S., Majesky, M. W., et al. (2023) · JCI Insight · doi:10.1172/jci.insight.164862 · Cited by 21
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Tomaselli, D., Mautone, N., Mai, A., & Rotili, D. (2020) · European Journal of Medicinal Chemistry · doi:10.1016/j.ejmech.2020.112750 · Cited by 21
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Temporal regulation of chromatin during myoblast differentiation
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Sanchez, J. C., Zhang, L., Evoli, S., Schnicker, N., Nunez-Hernandez, M., Yu, L. P., Wereszczynski, J., Pufall, M. A., & Musselman, C. A. (2020) · Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms · doi:10.1016/j.bbagrm.2020.194566 · Cited by 20
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You, S., Zhang, Y., Xu, J., Qian, H. R., Wu, S., Wu, B., Lu, S., Sun, Y., & Zhang, N. (2020) · Oxidative Medicine and Cellular Longevity · doi:10.1155/2020/6095673 · Cited by 21
Lee, E. C. Y., Reichl, K. D., & Gopalsamy, A. (2024) · Expert Opinion on Therapeutic Patents · doi:10.1080/13543776.2024.2355258 · Cited by 19
Yang, L., Tu, W., Leng, L., Huang, L., Jiang, W., Wang, M., Wang, Y., Meagher, J. L., Chinnaswamy, K., Stuckey, J. A., et al. (2025) · Journal of Medicinal Chemistry · doi:10.1021/acs.jmedchem.4c01904 · Cited by 19
Pierri, M., Gazzillo, E., Chini, M. G., Ferraro, M. G., Piccolo, M., Μaione, F., Irace, C., Bifulco, G., Bruno, I., Terracciano, S., et al. (2021) · Bioorganic Chemistry · doi:10.1016/j.bioorg.2021.105480 · Cited by 20
Mammalian SWI/SNF Enzymes and the Epigenetics of Tumor Cell Metabolic Reprogramming
Nickerson, J. A., Wu, Q., & Imbalzano, A. N. (2017) · Frontiers in Oncology · doi:10.3389/fonc.2017.00049 · Cited by 18
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Enhancer reprogramming underlies therapeutic utility of a SMARCA2 degrader in SMARCA4 mutant cancer
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Leng, L., Tu, W., Yang, L., Huang, L., Wang, M., Meagher, J. L., Chinnaswamy, K., Allu, S. R., Rej, R. K., Tošović, J., et al. (2025) · Journal of Medicinal Chemistry · doi:10.1021/acs.jmedchem.4c01903 · Cited by 17
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Dudek, A. H., Pfaff, F., Bolte, H., Kontchou, C. W., & Schwemmle, M. (2018) · Journal of Virology · doi:10.1128/jvi.00343-18 · Cited by 16
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Perner, F., Berg, T., Sasca, D., Mersiowsky, S., Gadrey, J. Y., Thomas, J. M., Kühn, M. W. M., & Lübbert, M. (2025) · International Journal of Cancer · doi:10.1002/ijc.35389 · Cited by 16
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Reichl, K. D., Lee, E. C. Y., & Gopalsamy, A. (2024) · Expert Opinion on Therapeutic Patents · doi:10.1080/13543776.2024.2338111 · Cited by 15
Sun, S., Li, Q., Zhang, Z., Xiong, S., Zhang, Y., Liu, Q., Li, Z., Yang, F., & Zhang, S. (2022) · Environmental Health and Preventive Medicine · doi:10.1265/ehpm.21-00254 · Cited by 15
Jiménez, C., Antonelli, R., Nadal‐Ribelles, M., Devis, L., Latorre, P., Solé, C., Masanas, M., Molero-Valenzuela, A., Soriano, A., de Toledo, J. S., et al. (2022) · Molecular Cancer · doi:10.1186/s12943-022-01643-4 · Cited by 15
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Cuadros, M., Sánchez-Martín, V., Herrera, A., Baliñas-Gavira, C., Martín-Padrón, J., Boyero, L., Peinado, P., & Medina, P. P. (2017) · Clinical & Translational Oncology · doi:10.1007/s12094-017-1633-2 · Cited by 15
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Güneş, C., Paszkowski‐Rogacz, M., Rahmig, S., Khattak, S., Camgöz, A., Wermke, M., Dahl, A., Bornhäuser, M., Waskow, C., & Buchholz, F. (2019) · Stem Cell Reports · doi:10.1016/j.stemcr.2019.03.012 · Cited by 14
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Palmer, W. S. (2016) · Drug Discovery Today Technologies · doi:10.1016/j.ddtec.2016.06.005 · Cited by 13
Self-citationA Chemical Probe for the ATAD2 Bromodomain
Bamborough, P., Chung, C., Demont, E. H., Furze, R. C., Bannister, A. J., Che, K. H., Diallo, H., Douault, C., Grandi, P., Kouzarides, T., et al. (2016) · Angewandte Chemie · doi:10.1002/ange.201603928 · Cited by 13
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Bowkett, D., Talon, R., Tallant, C., Schofield, C. J., von Delft, F., Knapp, S., Bruton, G., & Brennan, P. E. (2018) · ChemMedChem · doi:10.1002/cmdc.201800030 · Cited by 13
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Radhakrishnan, R., Chanana, U. B., Hussain, S., Sharma, S., Goel, K., Bisht, D., Patne, K., Swer, P. B., Hockensmith, J. W., & Muthuswami, R. (2021) · PLoS ONE · doi:10.1371/journal.pone.0251354 · Cited by 12
Self-citationTumor suppression via inhibition of SWI/SNF complex-dependent NF-κB activation
Kobayashi, K., Hiramatsu, H., Nakamura, S., Kobayashi, K., Haraguchi, T., & Iba, H. (2017) · Scientific Reports · doi:10.1038/s41598-017-11806-9 · Cited by 12
Pharmacological Modulation of Transcriptional Coregulators in Cancer
Bishop, T. R., Zhang, Y., & Erb, M. A. (2019) · Trends in Pharmacological Sciences · doi:10.1016/j.tips.2019.04.004 · Cited by 11
Wang, F., Jing, Y., Cheng, C., Cao, Z., Jiao, J., & Chen, Z. (2021) · BMC Medical Genomics · doi:10.1186/s12920-021-01043-5 · Cited by 12
SMARCA2 and SMARCA4 Participate in DNA Damage Repair
Yu, L. L., & Wu, D. (2024) · Frontiers in Bioscience-Landmark · doi:10.31083/j.fbl2907262 · Cited by 11
Ji, M. H., Yu, D., Liu, X., Wang, L., Zhang, D., Yang, Z., Huang, W., Fan, H., Wang, L., & Sun, H. (2024) · European Journal of Medicinal Chemistry · doi:10.1016/j.ejmech.2024.116751 · Cited by 11
Fang, R., Wang, X., Wu, R., Pan, R., Tian, M., Zhang, R., Wei, X., Wang, X., Ye, S., Li, F., et al. (2025) · Carcinogenesis · doi:10.1093/carcin/bgaf002 · Cited by 11
SMARCA2 protein: Structure, function and perspectives of drug design
Guo, Z., Wang, P., Han, Y., Jiang, S., Yang, X., & Cao, S. (2025) · European Journal of Medicinal Chemistry · doi:10.1016/j.ejmech.2025.117319 · Cited by 12
Comprehensive Analysis of SWI/SNF Inactivation in Lung Adenocarcinoma Cell Models
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B Lymphocyte Specification Is Preceded by Extensive Epigenetic Priming in Multipotent Progenitors
Strid, T., Okuyama, K., Tingvall-Gustafsson, J., Kuruvilla, J., Jensen, C. T., Lang, S., Javarappa, M. P. A., Somasundaram, R., Åhsberg, J., Cristóbal, S., et al. (2021) · The Journal of Immunology · doi:10.4049/jimmunol.2100048 · Cited by 11
The SWI/SNF Complex: A Frequently Mutated Chromatin Remodeling Complex in Cancer
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Targeting epigenetics using synthetic lethality in precision medicine
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Jagani, Z., Chenail, G., Xiang, K. X., Bushold, G., Bhang, H. C., Li, A., Elliott, G., Zhu, J., Vattay, A., Gilbert, T. J., et al. (2019) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/812628 · Cited by 11
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Xia, Q., Zhan, X., Fan, X., Ye, S., Shi, S., Li, R., Xue, W., Wang, X., Ma, H., Zhen-feng, L., et al. (2016) · Histopathology · doi:10.1111/his.13120 · Cited by 10
Kotagiri, S., Wang, Y., Han, Y., Liang, X., Blazanin, N., Mazhar, H., Sebastian, M. M., Nguyen, P. K., Jiang, Y., & Lissanu, Y. (2025) · Journal of Medicinal Chemistry · doi:10.1021/acs.jmedchem.4c02577 · Cited by 9
Yang, X., He, Y., Kim, R. D., Fleming, J. B., & Xie, H. (2020) · Targeted Oncology · doi:10.1007/s11523-020-00782-2 · Cited by 10
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Hong, W., Zhu, Y., Lin, Y., Tang, S., Chen, J., Xu, L., Jiang, J., Zong, Y., Zhang, Y., Sun, A., et al. (2024) · Life Sciences · doi:10.1016/j.lfs.2023.122320 · Cited by 9
Centore, R. C., Soares, L. M. M., Topal, S., Vaswani, R. G., Ichikawa, K., Li, Z., Fan, H. B., Setser, J. W., Lahr, D. L., Zawadzke, L. E., et al. (2023) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2023.09.11.557162 · Cited by 8
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Cai, M., Dong, J., Li, H., & Qin, J. (2022) · Current Medicinal Chemistry · doi:10.2174/0929867329666220211091806 · Cited by 7
Marques, A.-S. M. C., Bauer, L. G., Nguyen, T. A., Orta, A. G., Venne, J. L., Cheng, L., Balıkçı, E., Tivon, B., London, N., Kubicek, S., et al. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2025.03.16.643557 · Cited by 7
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Metadata
- Authors
- Vangamudi, B., Paul, T. A., Shah, P. K., Kost-Alimova, M., Nottebaum, L., Shi, X., Zhan, Y., Leo, E., Mahadeshwar, H. S., Protopopov, A., Futreal, A., Tieu, T. N., Peoples, M., Heffernan, T. P., Marszalek, J. R., Toniatti, C., Petrocchi, A., Verhelle, D., Owen, D. R., Draetta, G., Jones, P., Palmer, W. S., Sharma, S., & Andersen, J. N.
- Affiliations
- The University of Texas MD Anderson Cancer Center (US)
- Pfizer (United States) (US)
- 1Institute for Applied Cancer Science, The University of Texas MD Anderson Cancer Center, Houston, Texas.
- 3Department of Genomic Medicine, The University of Texas MD Anderson Cancer Center, Houston, Texas.
- Corresponding author
- Sharma, Shikhar
- Andersen, Jannik N.
- ORCID
- Venue
- Cancer Research
- Published
- 2015-09-14
- Volume
- 75
- Issue
- 18
- Pages
- 3865-3878
- ISSN
- 0008-5472 (ISSN-L)
- 1538-7445
- PMC
- PMC4755107
- OpenAlex
- W2137511124
- Cited by
- 281
- References
- 50
- Citations by year
- 2026: 22 · 2025: 31 · 2024: 28 · 2023: 36 · 2022: 22 · 2021: 24 · 2020: 25 · 2019: 19 · 2018: 20 · 2017: 26 · 2016: 22 · 2015: 6
- FWCI
- 11.30
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- Cancer Research (publishedVersion)
- PubMed (publishedVersion)
- Europe PMC (PubMed Central) (acceptedVersion)
- PubMed Central (acceptedVersion)
- Funders
- American Association for Cancer Research
- Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung
- National Cancer Institute (P30CA016672)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Chromatin Remodeling and Cancer
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Protein Degradation and Inhibitors
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Genomics and Chromatin Dynamics
- Keywords
- SMARCA2, SMARCA4, SWI/SNF complex, ATPase domain, bromodomain, bromodomain inhibitors, drug target validation, synthetic lethality, chromatin binding, cDNA rescue, rhabdoid tumor, synovial sarcoma, leukemia, transcriptional programs, chromatin immunoprecipitation
- MeSH terms
- Binding, Competitive, Catalysis, Chromatin, Chromosomal Proteins, Non-Histone, DNA Helicases, Genetic Complementation Test, Humans, Lung Neoplasms, Neoplasm Proteins, Neoplasms, Nuclear Proteins, Pyridines, Sarcoma, Synovial, Transcription Factors, Protein Structure, Tertiary, DNA, Complementary, Rhabdoid Tumor, RNA Interference, RNA, Small Interfering, Chromatin Assembly and Disassembly, Cell Line, Tumor, Microarray Analysis, Azabicyclo Compounds, Gene Knockout Techniques, Molecular Targeted Therapy
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