Evaluation of Alternative In Vivo Drug Screening Methodology: A Single Mouse Analysis
Open accessPublished version of a preprint
Abstract
Traditional approaches to evaluating antitumor agents using human tumor xenograft models have generally used cohorts of 8 to 10 mice against a limited panel of tumor models. An alternative approach is to use fewer animals per tumor line, allowing a greater number of models that capture greater molecular/genetic heterogeneity of the cancer type. We retrospectively analyzed 67 agents evaluated by the Pediatric Preclinical Testing Program to determine whether a single mouse, chosen randomly from each group of a study, predicted the median response for groups of mice using 83 xenograft models. The individual tumor response from a randomly chosen mouse was compared with the group median response using established response criteria. A total of 2,134 comparisons were made. The single tumor response accurately predicted the group median response in 1,604 comparisons (75.16%). The mean tumor response correct prediction rate for 1,000 single mouse random samples was 78.09%. Models had a range for correct prediction (60%–87.5%). Allowing for misprediction of ± one response category, the overall mean correct single mouse prediction rate was 95.28%, and predicted overall objective response rates for group data in 66 of 67 drug studies. For molecularly targeted agents, occasional exceptional responder models were identified and the activity of that agent confirmed in additional models with the same genotype. Assuming that large treatment effects are targeted, this alternate experimental design has similar predictive value as traditional approaches, allowing for far greater numbers of models to be used that more fully encompass the heterogeneity of disease types. Cancer Res; 76(19); 5798–809. ©2016 AACR.
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
Several large studies have validated the 1 × 1 × 1 mouse clinical trial approach, showing high reproducibility and identification of known predictive biomarkers.
“Several large studies have validated this approach, showing high reproducibility and identification of known predictive biomarkers (31, 32, 38).”
From Preclinical Modeling of Navtemadlin Pharmacokinetics, Pharmacodynamics, and Efficacy in IDH–Wild-type Glioblastoma (2025) · cites this paper as [38]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Cites
Lynch, T. J., Bell, D. W., Sordella, R., Gurubhagavatula, S., Okimoto, R. A., Brannigan, B. W., Harris, P. L., Haserlat, S. M., Supko, J. G., Haluska, F. G., et al. (2004) · New England Journal of Medicine · doi:10.1056/nejmoa040938 · Cited by 11,486 · see citing works
<i>EGFR</i> Mutations in Lung Cancer: Correlation with Clinical Response to Gefitinib Therapy
Paez, J. G., Jänne, P. A., Lee, J. C., Tracy, S., Greulich, H., Gabriel, S., Herman, P., Kaye, F. J., Lindeman, N., Boggon, T. J., et al. (2004) · Science · doi:10.1126/science.1099314 · Cited by 9,368 · see citing works
Anaplastic Lymphoma Kinase Inhibition in Non–Small-Cell Lung Cancer
Kwak, E. L., Bang, Y., Camidge, D. R., Shaw, A. T., Solomon, B., Maki, R. G., Ou, S. I., Dezube, B. J., Janne, P. A., Costa, D. B., et al. (2010) · New England Journal of Medicine · doi:10.1056/nejmoa1006448 · Cited by 4,442 · see citing works
Recent Advances in Neuroblastoma
Maris, J. M. (2010) · New England Journal of Medicine · doi:10.1056/nejmra0804577 · Cited by 1,991 · see citing works
Self-citationPatient-Derived Xenograft Models: An Emerging Platform for Translational Cancer Research
Hidalgo, M. M., Amant, F. C., Biankin, A. V., Budínská, E., Byrne, A. T., Caldas, C., Clarke, R. B., de Jong, S., Jonkers, J., Mælandsmo, G. M., et al. (2014) · Cancer Discovery · doi:10.1158/2159-8290.cd-14-0001 · Cited by 1,748 · see citing works
Gao, H., Korn, J. M., Ferretti, S., Monahan, J. E., Wang, Y., Singh, M., Zhang, C., Schnell, C., Yang, G., Zhang, Y., et al. (2015) · Nature Medicine · doi:10.1038/nm.3954 · Cited by 1,393 · see citing works
Shern, J. F., Chen, L., Chmielecki, J., Wei, J. S., Patidar, R., Rosenberg, M. W., Ambrogio, L., Auclair, D., Wang, J., Song, Y. K., et al. (2014) · Cancer Discovery · doi:10.1158/2159-8290.cd-13-0639 · Cited by 742 · see citing works
The pediatric preclinical testing program: Description of models and early testing results
Houghton, P. J., Morton, C. L., Tucker, C., Payne, D., Favours, E., Cole, C., Gorlick, R., Kolb, E. A., Zhang, W., Lock, R., et al. (2007) · Pediatric Blood & Cancer · doi:10.1002/pbc.21078 · Cited by 480 · see citing works
Self-citationGillet, J.-P., Calcagno, A. M., Varma, S., Marino, M., Green, L. J., Vora, M. I., Patel, C., Orina, J. N., Eliseeva, T. A., Singal, V., et al. (2011) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1111840108 · Cited by 477 · see citing works
Decoding the regulatory landscape of medulloblastoma using DNA methylation sequencing
Hovestadt, V., Jones, D. T. W., Picelli, S., Wang, W., Kool, M., Northcott, P., Sultan, M., Stachurski, K., Ryzhova, M., Warnatz, H., et al. (2014) · Nature · doi:10.1038/nature13268 · Cited by 437 · see citing works
Contributions of Human Tumor Xenografts to Anticancer Drug Development
Sausville, E. A., & Burger, A. M. (2006) · Cancer Research · doi:10.1158/0008-5472.can-05-3627 · Cited by 348 · see citing works
Classification of Rhabdomyosarcoma and Its Molecular Basis
Parham, D. M., & Barr, F. G. (2013) · Advances in Anatomic Pathology · doi:10.1097/pap.0b013e3182a92d0d · Cited by 338 · see citing works
Taylor, J. G., Cheuk, A., Tsang, P. S., Chung, J., Song, Y., Desai, K. D., Yu, Y., Chen, Q., Shah, K. J., Youngblood, V., et al. (2009) · Journal of Clinical Investigation · doi:10.1172/jci39703 · Cited by 317 · see citing works
Translational value of mouse models in oncology drug development
Gould, S. E., Junttila, M. R., & de Sauvage, F. J. (2015) · Nature Medicine · doi:10.1038/nm.3853 · Cited by 293 · see citing works
Hovestadt, V., Remke, M., Kool, M., Pietsch, T., Northcott, P. A., Fischer, R., Cavalli, F. M. G., Ramaswamy, V., Zapatka, M., Reifenberger, G., et al. (2013) · Acta Neuropathologica · doi:10.1007/s00401-013-1126-5 · Cited by 292 · see citing works
Liem, N., Papa, R., Milross, C., Schmid, M. A., Tajbakhsh, M., Choi, S., Ramirez, C., Rice, A., Haber, M., Norris, M., et al. (2004) · Blood · doi:10.1182/blood-2003-08-2911 · Cited by 245 · see citing works
Self-citationIntegrating pharmacology and in vivo cancer models in preclinical and clinical drug development
Peterson, J. K., & Houghton, P. J. (2004) · European Journal of Cancer · doi:10.1016/j.ejca.2004.01.003 · Cited by 223 · see citing works
Self-citationEmergence of New ALK Mutations at Relapse of Neuroblastoma
Schleiermacher, G., Javanmardi, N., Bernard, V., Leroy, Q., Cappo, J., Frio, T. R., Pierron, G., Lapouble, E., Combaret, V., Speleman, F., et al. (2014) · Journal of Clinical Oncology · doi:10.1200/jco.2013.54.0674 · Cited by 212 · see citing works
Pappo, A. S., Vassal, G., Crowley, J. J., Bolejack, V., Hogendoorn, P. C. W., Chugh, R. K., Ladanyi, M., Grippo, J. F., Dall, G., Staddon, A. P., et al. (2014) · Cancer · doi:10.1002/cncr.28728 · Cited by 198 · see citing works
Williams, S. A., Anderson, W. C., Santaguida, M. T., & Dylla, S. J. (2013) · Laboratory Investigation · doi:10.1038/labinvest.2013.92 · Cited by 185 · see citing works
Toward a Drug Development Path That Targets Metastatic Progression in Osteosarcoma
Khanna, C., Fan, T. M., Gorlick, R., Helman, L. J., Kleinerman, E. S., Adamson, P. C., Houghton, P. J., Tap, W. D., Welch, D. R., Steeg, P. S., et al. (2014) · Clinical Cancer Research · doi:10.1158/1078-0432.ccr-13-2574 · Cited by 178 · see citing works
Self-citationKolb, E. A., Gorlick, R. G., Houghton, P. J., Morton, C. L., Lock, R. B., Carol, H., Reynolds, C. P., Maris, J. M., Keir, S. T., Billups, C. A., et al. (2008) · Pediatric Blood & Cancer · doi:10.1002/pbc.21450 · Cited by 174 · see citing works
Self-citationPhenotypic instability of Saos-2 cells in long-term culture
Hausser, H., & Brenner, R. E. (2005) · Biochemical and Biophysical Research Communications · doi:10.1016/j.bbrc.2005.05.097 · Cited by 140 · see citing works
Friedman, H. S., Colvin, O. M., Skapek, S. X., LUDEMAN, S. M., Elion, G. B., Schold, S. C., Jacobsen, P. F., Muhlbaier, L. H., & Bigner, D. D. (1988) · PubMed · Cited by 132 · see citing works
Smith, M. A., Reynolds, C. P., Kang, M. H., Kolb, E. A., Gorlick, R. G., Carol, H., Lock, R. B., Keir, S. T., Maris, J. M., Billups, C. A., et al. (2014) · Clinical Cancer Research · doi:10.1158/1078-0432.ccr-14-2572 · Cited by 121 · see citing works
Self-citationGenomic Characterization of Childhood Acute Lymphoblastic Leukemia
Mullighan, C. G. (2013) · Seminars in Hematology · doi:10.1053/j.seminhematol.2013.10.001 · Cited by 120 · see citing works
Molecular Characterization of the Pediatric Preclinical Testing Panel
Neale, G. A. M., Su, X., Morton, C. L., Phelps, D. A., Gorlick, R. G., Lock, R. B., Reynolds, C. P., Maris, J. M., Friedman, H. S., Dome, J. S., et al. (2008) · Clinical Cancer Research · doi:10.1158/1078-0432.ccr-07-5090 · Cited by 117 · see citing works
Self-citationInitial testing (stage 1) of AZD6244 (ARRY‐142886) by the pediatric preclinical testing program
Kolb, E. A., Gorlick, R. G., Houghton, P. J., et al. (2010) · Pediatric Blood & Cancer · doi:10.1002/pbc.22576 · Cited by 112 · see citing works
Self-citationWhiteford, C. C., Bilke, S., Greer, B. T., Chen, Q., Braunschweig, T. A., Cenacchi, N., Wei, J. S., Smith, M. A., Houghton, P. J., Morton, C. L., et al. (2007) · Cancer Research · doi:10.1158/0008-5472.can-06-0610 · Cited by 108 · see citing works
Self-citationLineage of origin in rhabdomyosarcoma informs pharmacological responsePreprint
Abraham, J., Núñez‐Álvarez, Y., Hettmer, S., et al. (2014) · Genes & Development · doi:10.1101/gad.238733.114 · Cited by 108 · see citing works
Houghton, P. J., Morton, C. L., Gorlick, R. G., Kolb, E. A., Keir, S. T., Reynolds, C. P., Kang, M. H., Maris, J. M., Wu, J., & Smith, M. A. (2010) · Pediatric Blood & Cancer · doi:10.1002/pbc.22367 · Cited by 97 · see citing works
Self-citationHoughton, J. A., & Taylor, D. M. (1978) · British Journal of Cancer · doi:10.1038/bjc.1978.28 · Cited by 87 · see citing works
Initial testing (stage 1) of sunitinib by the pediatric preclinical testing program
Maris, J. M., Courtright, J., Houghton, P. J., et al. (2008) · Pediatric Blood & Cancer · doi:10.1002/pbc.21535 · Cited by 85 · see citing works
Self-citationSmith, M. A., Hampton, O. A., Reynolds, C. P., Kang, M. H., Maris, J. M., Gorlick, R. G., Kolb, E. A., Lock, R. B., Carol, H., Keir, S. T., et al. (2014) · Pediatric Blood & Cancer · doi:10.1002/pbc.25201 · Cited by 74 · see citing works
Self-citationInitial testing of dasatinib by the pediatric preclinical testing program
Kolb, E. A., Gorlick, R. G., Houghton, P. J., Morton, C. L., Lock, R. B., Tajbakhsh, M., Reynolds, C. P., Maris, J. M., Keir, S. T., Billups, C. A., et al. (2007) · Pediatric Blood & Cancer · doi:10.1002/pbc.21368 · Cited by 74 · see citing works
Self-citationThe growth kinetics of xenografts of human colorectal tumours in immune deprived mice
Pickard, R. G., Cobb, L., & Steel, G. G. (1975) · British Journal of Cancer · doi:10.1038/bjc.1975.5 · Cited by 74 · see citing works
Initial testing of the MDM2 inhibitor RG7112 by the pediatric preclinical testing program
Carol, H., Reynolds, C. P., Kang, M. H., Keir, S. T., Maris, J. M., Gorlick, R. G., Kolb, E. A., Billups, C. A., Geier, B., Kurmasheva, R. T., et al. (2012) · Pediatric Blood & Cancer · doi:10.1002/pbc.24235 · Cited by 64 · see citing works
Self-citationManesh, D. M., El‐Hoss, J., Evans, K., Richmond, J., Toscan, C. E., Bracken, L. S., Hedrick, A., Sutton, R., Marshall, G. M., Wilson, W. R., et al. (2015) · Blood · doi:10.1182/blood-2014-12-618900 · Cited by 63 · see citing works
Self-citationRichmond, J., Carol, H., Evans, K., High, L. M., Mendomo, A., Robbins, A. K., Meyer, C., Venn, N. C., Marschalek, R., Henderson, M. J., et al. (2015) · Clinical Cancer Research · doi:10.1158/1078-0432.ccr-14-2300 · Cited by 61 · see citing works
Self-citationGrowth and characterization of childhood rhabdomyosarcomas as xenografts.
Houghton, J. A., Houghton, P. J., & Webber, B. L. (1982) · PubMed · Cited by 46 · see citing works
Self-citationStriking dichotomy in outcome of MYCN‐amplified neuroblastoma in the contemporary era
Kushner, B. H., Modak, S. I., Kramer, K., et al. (2014) · Cancer · doi:10.1002/cncr.28687 · Cited by 37 · see citing works
Emerging Insights into the Ependymoma Epigenome
Mack, S. C., Witt, H., Wang, X., Milde, T., Yao, Y., Bertrand, K. C., Korshunov, A., Pfister, S. M., & Taylor, M. D. (2013) · Brain Pathology · doi:10.1111/bpa.12020 · Cited by 22 · see citing works
The New NCI Screen and Its Implications for Clinical Evaluation
GOLDIN, A. S., & Venditti, J. M. (1980) · Recent results in cancer research/Recent Results in Cancer Research · doi:10.1007/978-3-642-81392-4_2 · Cited by 20 · see citing works
Nagasawa, D. T., Trang, A., Choy, W., Spasic, M., Yew, A. Y., Zarinkhou, G., Garcia, H. M., & Yang, I. (2013) · Clinical Neurology and Neurosurgery · doi:10.1016/j.clineuro.2012.12.006 · Cited by 20 · see citing works
GOLDIN, A. S., & Venditti, J. M. (1980) · Cancer Treatment Reviews · doi:10.1016/s0305-7372(80)80032-6 · Cited by 17 · see citing works
Morton, C. L., Papa, R. A., Lock, R. B., et al. (2007) · Current Protocols in Pharmacology · doi:10.1002/0471141755.ph1408s39 · Cited by 17 · see citing works
Self-citationInitial testing (stage 1) of temozolomide by the pediatric preclinical testing program
Keir, S. T., Maris, J. M., Reynolds, C. P., et al. (2013) · Pediatric Blood & Cancer · doi:10.1002/pbc.24368 · Cited by 13 · see citing works
Self-citationA Prospective Screening Program: Current Screening and its Status
Goldin, A., & Venditti, J. M. (1981) · Recent results in cancer research/Recent Results in Cancer Research · doi:10.1007/978-3-642-81565-2_15 · Cited by 6 · see citing works
Flagged first, then by citations
Research works printed but not linked: 2
- [48]Kolb EA Gorlick R Houghton PJ Morton CL Neale G Keir ST Initial testing (stage 1) of AZD6244 (ARRY-142886) by the Pediatric Preclinical Testing Program Pediatr Blood Cancer 2010 55 4 668 77 20806365 PMC3004092
- [50]Smith MA Hampton OA Reynolds CP Kang MH Maris JM Gorlick R Initial testing (stage 1) of the PARP inhibitor BMN 673 by the Pediatric Preclinical Testing Program: PALB2 mutation predicts exceptional in vivo response to BMN 673 Pediatr Blood Cancer 2015 62 91 98 25263539 PMC4456187
Cited by
Sorted by citations
Roberts, R. D., Lizardo, M. M., Reed, D. R., Hingorani, P., Glover, J., Allen‐Rhoades, W., Fan, T., Khanna, C., Sweet‐Cordero, E. A., Cash, T., et al. (2019) · Cancer · doi:10.1002/cncr.32351 · Cited by 127 · see citing works
Self-citationKendsersky, N. M., Lindsay, J., Kolb, E. A., Smith, M. A., Teicher, B. A., Erickson, S. W., Earley, E. J., Mosse, Y. P., Martinez, D., Pogoriler, J., et al. (2021) · Clinical Cancer Research · doi:10.1158/1078-0432.ccr-20-4221 · Cited by 120 · see citing works
Self-citationHingorani, P., Zhang, W., Zhang, Z., Xu, Z., Wang, W.-L., Roth, M. E., Wang, Y., Gill, J. B., Harrison, D. J., Teicher, B. A., et al. (2022) · Molecular Cancer Therapeutics · doi:10.1158/1535-7163.mct-21-0758 · Cited by 28 · see citing works
Self-citationVaubel, R. A., Zhang, W., Oh, J.-H., Mladek, A. C., Pasa, T. I., Gantchev, J. K., Waller, K. L., Baquer, G., Stopka, S. A., Regan, M. S., et al. (2025) · Clinical Cancer Research · doi:10.1158/1078-0432.ccr-25-0244 · Cited by 2 · see citing works
- Authors
- Murphy, B., Yin, H., Maris, J. M., Kolb, E. A., Gorlick, R., Reynolds, C. P., Kang, M. H., Keir, S. T., Kurmasheva, R. T., Dvorchik, I., Wu, J., Billups, C. A., Boateng, N., Smith, M. A., Lock, R. B., & Houghton, P. J.
- Affiliations
- Nationwide Children's Hospital (US)
- Children's Hospital of Philadelphia (US)
- Alfred I. duPont Hospital for Children (US)
- Children's Hospital at Montefiore (US)
- Texas Tech University (US)
- Duke Medical Center (US)
- The University of Texas at San Antonio Health Science Center (US)
- St. Jude Children's Research Hospital (US)
- National Cancer Institute (US)
- Children's Cancer Institute Australia (AU)
- Corresponding author
- Houghton, Peter J.
- ORCID
- Venue
- Cancer Research
- Published
- 2016-10-01
- Volume
- 76
- Issue
- 19
- Pages
- 5798-5809
- ISSN
- 0008-5472 (ISSN-L)
- 1538-7445
- PMC
- PMC5050128
- OpenAlex
- W2492058432
- Cited by
- 69
- References
- 48
- Citations by year
- 2026: 4 · 2025: 10 · 2024: 5 · 2023: 2 · 2022: 8 · 2021: 10 · 2020: 7 · 2019: 10 · 2018: 4 · 2017: 8 · 2016: 1
- FWCI
- 11.79
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- Cancer Research (publishedVersion)
- PubMed (publishedVersion)
- PubMed Central (acceptedVersion)
- UNSWorks (University of New South Wales, Sydney, Australia) (submittedVersion, cc-by-nc-nd)
- UNSWorks (UNSW Sydney) (submittedVersion, cc-by-nc-nd)
- Funders
- National Cancer Institute (NO1-CM42216 and UO1CA199297)
- Topics
- Health Sciences › Veterinary › Small Animals › Animal testing and alternatives
- Health Sciences › Medicine › Oncology › Cancer Cells and Metastasis
- Health Sciences › Medicine › Pulmonary and Respiratory Medicine › Veterinary Oncology Research
- Keywords
- tumor xenograft models, anticancer drug screening, predictive value, objective response rate, molecularly targeted agents, childhood cancer, tumor heterogeneity
- MeSH terms
- Animals, Humans, Neoplasms, Retrospective Studies, Xenograft Model Antitumor Assays, Cell Line, Tumor, Mice, Precursor Cell Lymphoblastic Leukemia-Lymphoma
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review