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Linking the KIR phenotype with STAT3 and TET2 mutations to identify chronic lymphoproliferative disorders of NK cells
Abstract
Distinguishing chronic lymphoproliferative disorders of NK cells (CLPD-NK) from reactive NK-cell expansion is challenging. We assessed the value of killer immunoglobulin-like receptor(KIR) phenotyping and targeted high-throughput sequencing in a cohort of 114 consecutive patients with NK cell proliferation, retrospectively assigned to a CLPD-NK group (n = 46) and a reactive NK group (n = 68). We then developed an NK-cell clonality score combining flow cytometry and molecular profiling with a positive predictive value of 93%. STAT3 and TET2 mutations were respectively identified in 27% and 34% of the patients with CLPD-NK, constituting a new diagnostic hallmark for this disease. TET2-mutated CLPD-NK preferentially exhibited a CD16low phenotype, more frequently displayed a lower platelet count, and was associated with other hematologic malignancies such as myelodysplasia. To explore the mutational clonal hierarchy of CLPD-NK, we performed whole-exome sequencing of sorted, myeloid, T, and NK cells and found that TET2 mutations were shared by myeloid and NK cells in 3 of 4 cases. Thus, we hypothesized that TET2 alterations occur in early hematopoietic progenitors which could explain a potential link between CLPD-NK and myeloid malignancies. Finally, we analyzed the transcriptome by RNA sequencing of 7 CLPD-NK and evidenced 2 groups of patients. The first group displayed STAT3 mutations or SOCS3 methylation and overexpressed STAT3 target genes. The second group, including 2 TET2-mutated cases, significantly underexpressed genes known to be downregulated in angioimmunoblastic T-cell lymphoma. Our results provide new insights into the pathogenesis of NK-cell proliferative disorders and, potentially, new therapeutic opportunities.
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“In AITL, TET2 mutations have been detected in CD34 + progenitor cells with both myeloid and lymphoid differentiation potential 225 .”
From Clonal haematopoiesis and dysregulation of the immune system (2023) · cites this paper as [225]
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The 2016 revision of the World Health Organization classification of lymphoid neoplasms
Swerdlow, S. H., Campo, E., Pileri, S. A., Harris, N. L., Stein, H., Siebert, R., Advani, R., Ghielmini, M., Salles, G. A., Zelenetz, A. D., et al. (2016) · Blood · doi:10.1182/blood-2016-01-643569 · Cited by 7,831
Methylation-specific PCR: a novel PCR assay for methylation status of CpG islands.
Herman, J. G., Graff, J. R., Myöhänen, S., Nelkin, B. D., & Baylin, S. B. (1996) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.93.18.9821 · Cited by 5,646
Clonal hematopoiesis and blood-cancer risk inferred from blood DNA sequence
Genovese, G., Kähler, A. K., Handsaker, R. E., Lindberg, J., Rose, S. A., Bakhoum, S. F., Chambert, K., Mick, E., Neale, B. M., Fromer, M., et al. (2014) · New England Journal of Medicine · doi:10.1056/nejmoa1409405 · Cited by 3,531
Gnirke, A., Melnikov, A., Maguire, J., Rogov, P., LeProust, E. M., Brockman, W., Fennell, T., Giannoukos, G., Fisher, S., Russ, C., et al. (2009) · Nature Biotechnology · doi:10.1038/nbt.1523 · Cited by 1,433
SOCS3 negatively regulates IL-6 signaling in vivo
Croker, B. A., Krebs, D. L., Zhang, J.-G., Wormald, S., Willson, T. A., Stanley, E. G., Robb, L., Greenhalgh, C. J., Förster, I., Clausen, B. E., et al. (2003) · Nature Immunology · doi:10.1038/ni931 · Cited by 840
Somatic STAT3 Mutations in Large Granular Lymphocytic Leukemia
Koskela, H. L. M., Eldfors, S., Ellonen, P., van Adrichem, A. J., Kuusanmäki, H., Andersson, E. I., Lagström, S., Clemente, M. J., Olson, T., Jalkanen, S. E., et al. (2012) · New England Journal of Medicine · doi:10.1056/nejmoa1114885 · Cited by 777
TET2 and DNMT3A Mutations in Human T-Cell Lymphoma
Couronné, L., Bastard, C., & Bernard, O. A. (2012) · New England Journal of Medicine · doi:10.1056/nejmc1111708 · Cited by 469
Jerez, A., Clemente, M. J., Makishima, H., Koskela, H., LeBlanc, F., Peng Ng, K., Olson, T., Przychodzen, B., Afable, M., Gomez-Segui, I., et al. (2012) · Blood · doi:10.1182/blood-2012-06-435297 · Cited by 424
Stat3 regulates genes common to both wound healing and cancer
Dauer, D. J., Ferraro, B., Song, L., Yu, B., Mora, L., Buettner, R., Enkemann, S., Jove, R., & Haura, E. B. (2005) · Oncogene · doi:10.1038/sj.onc.1208469 · Cited by 380
LGL leukemia: from pathogenesis to treatment
Lamy, T., Moignet, A., & Loughran, T. P. (2017) · Blood · doi:10.1182/blood-2016-08-692590 · Cited by 302
Self-citationDiscovery of somatic STAT5b mutations in large granular lymphocytic leukemia
Rajala, H. L. M., Eldfors, S., Kuusanmäki, H., van Adrichem, A. J., Olson, T., Lagström, S., Andersson, E. I., Jerez, A., Clemente, M. J., Yan, Y., et al. (2013) · Blood · doi:10.1182/blood-2012-12-474577 · Cited by 294
Lamy, T., & Loughran, T. P. (2011) · Blood · doi:10.1182/blood-2010-07-296962 · Cited by 290
Self-citationSantourlidis, S., Trompeter, H.-I., Weinhold, S., Eisermann, B., Meyer, K. L., Wernet, P., & Uhrberg, M. (2002) · The Journal of Immunology · doi:10.4049/jimmunol.169.8.4253 · Cited by 253
Piccaluga, P. P., Agostinelli, C., Califano, A., Carbone, A., Fantoni, L. I., Ferrari, S., Gazzola, A., Gloghini, A., Righi, S., Rossi, M., et al. (2007) · Cancer Research · doi:10.1158/0008-5472.can-07-1708 · Cited by 249
Diversity of peripheral blood human NK cells identified by single-cell RNA sequencing
Smith, S. L., Kennedy, P. R., Stacey, K., Worboys, J. D., Yarwood, A., Seo, S., Hegewisch-Solloa, E., Mistretta, B., Chatterjee, S. S., Gunaratne, P. H., et al. (2020) · Blood Advances · doi:10.1182/bloodadvances.2019000699 · Cited by 211
Current concepts: large granular lymphocyte leukemia
Lamy, T., & Loughran, T. P. (1999) · Blood Reviews · doi:10.1054/blre.1999.0118 · Cited by 204
Self-citationMishra, A., Liu, S., Sams, G. H., Curphey, D. P., Santhanam, R., Rush, L. J., Schaefer, D. M. W., Falkenberg, L. G., Sullivan, L., Jaroncyk, L., et al. (2012) · Cancer Cell · doi:10.1016/j.ccr.2012.09.009 · Cited by 172
Human NK Cell Development: One Road or Many?
Cichocki, F. M., Grzywacz, B. J., & Miller, J. S. (2019) · Frontiers in Immunology · doi:10.3389/fimmu.2019.02078 · Cited by 161
Progress in understanding and managing natural killer‐cell malignancies
Oshimi, K. (2007) · British Journal of Haematology · doi:10.1111/j.1365-2141.2007.06835.x · Cited by 157
Azare, J., Leslie, K., Al‐Ahmadie, H. A., Gerald, W. L., Weinreb, P. H., Violette, S. M., & Bromberg, J. (2007) · Molecular and Cellular Biology · doi:10.1128/mcb.02404-06 · Cited by 155
What Defines NK Cell Functional Fate: Phenotype or Metabolism?
Poznanski, S. M., & Ashkar, A. A. (2019) · Frontiers in Immunology · doi:10.3389/fimmu.2019.01414 · Cited by 147
Natural killer–cell differentiation by myeloid progenitors
Grzywacz, B. J., Kataria, N., Kataria, N., Blazar, B. R., Miller, J. S., & Verneris, M. R. (2010) · Blood · doi:10.1182/blood-2010-04-281394 · Cited by 146
TET2 Function in Hematopoietic Malignancies, Immune Regulation, and DNA Repair
Feng, Y., Li, X., Cassady, K. M., Zou, Z., & Zhang, X. (2019) · Frontiers in Oncology · doi:10.3389/fonc.2019.00210 · Cited by 125
Zambello, R., Falco, M., Chiesa, M. D., Trentin, L., Carollo, D., Castriconi, R., Cannas, G., Carlomagno, S., Cabrelle, A., Lamy, T., et al. (2003) · Blood · doi:10.1182/blood-2002-12-3898 · Cited by 111
Self-citationTeramo, A., Gattazzo, C., Passeri, F., Liço, A., Tasca, G., Cabrelle, A., Martini, V., Frezzato, F., Trimarco, V., Ave, E., et al. (2013) · Blood · doi:10.1182/blood-2012-07-441378 · Cited by 104
Epling‐Burnette, P. K., Painter, J. S., Chaurasia, P., Bai, F., Wei, S., Djeu, J. Y., & Loughran, T. P. (2004) · Blood · doi:10.1182/blood-2003-02-0400 · Cited by 97
The Immunophenotypic Attributes of NK Cells and NK-Cell Lineage Lymphoproliferative Disorders
Morice, W. G. (2007) · American Journal of Clinical Pathology · doi:10.1309/q49crj030l22mhlf · Cited by 87
Ding, H., Zhang, X., Su, Y., Jia, C., & Dai, C. (2020) · Cellular & Molecular Biology Letters · doi:10.1186/s11658-020-00204-1 · Cited by 83
High-Risk Clonal Hematopoiesis as the Origin of AITL and NPM1 -Mutated AML
Tiacci, E., Venanzi, A., Ascani, S., Marra, A., Cardinali, V., Martino, G., Codoni, V., Schiavoni, G., Martelli, M. P., & Falini, B. (2018) · New England Journal of Medicine · doi:10.1056/nejmc1806413 · Cited by 78
Consequences of mutant TET2 on clonality and subclonal hierarchy
Hirsch, C. M., Nazha, A., Kneen, K. E., Abazeed, M. E., Meggendorfer, M., Przychodzen, B. P., Nadarajah, N., Ademà, V., Nagata, Y., Goyal, A., et al. (2018) · Leukemia · doi:10.1038/s41375-018-0150-9 · Cited by 72
Tofacitinib as a novel salvage therapy for refractory T-cell large granular lymphocytic leukemia
Bilori, B., Thota, S., Clemente, M. J., Patel, B. J., Jerez, A., Afable, M. G., & Maciejewski, J. P. (2015) · Leukemia · doi:10.1038/leu.2015.280 · Cited by 71
Poullot, E., Zambello, R., LeBlanc, F., Bareau, B., March, E. D., Roussel, M., Boulland, M., Houot, R., Renault, A., Fest, T., et al. (2014) · Annals of Oncology · doi:10.1093/annonc/mdu369 · Cited by 67
Self-citationEfficacy of 5‐Azacytidine in a TET 2 mutated angioimmunoblastic T cell lymphoma
Cheminant, M., Bruneau, J., Kosmider, O., Lefrère, F., Delarue, R., Gaulard, P., Radford‐Weiss, I., Derrieux, C., Hermine, O., & Lemonnier, F. (2014) · British Journal of Haematology · doi:10.1111/bjh.13170 · Cited by 57
T cell large granular lymphocyte leukemia and chronic NK lymphocytosis
Barilà, G., Calabretto, G., Teramo, A., Vicenzetto, C., Gasparini, V. R., Semenzato, G., & Zambello, R. (2019) · Best Practice & Research Clinical Haematology · doi:10.1016/j.beha.2019.06.006 · Cited by 47
Morice, W. G., Jevremović, D., Olteanu, H., Roden, A. C., Nowakowski, G. S., Kroft, S. H., Hanson, C. A., & Kurtin, P. J. (2010) · Leukemia · doi:10.1038/leu.2009.304 · Cited by 40
Evans, H. S. (2000) · Human Pathology · doi:10.1053/hupa.2000.19298 · Cited by 40
The Need for a Consensus Next‐generation Sequencing Panel for Mature Lymphoid Malignancies
Sujobert, P., Bris, Y. L., de Leval, L., Gros, A., Merlio, J. P., Pastoret, C., Huet, S., Sarkozy, C., Davi, F., Callanan, M. B., et al. (2019) · HemaSphere · doi:10.1097/hs9.0000000000000169 · Cited by 39
Self-citationLarge granular lymphocytic leukemia coexists with myeloid clones and myelodysplastic syndrome
Durrani, J., Awada, H. K., Kishtagari, A., Visconte, V., Kerr, C. M., Ademà, V., Nagata, Y., Kuzmanovic, T., Hong, S., Patel, B. J., et al. (2019) · Leukemia · doi:10.1038/s41375-019-0601-y · Cited by 38
Recurrent alterations ofTNFAIP3(A20) in T-cell large granular lymphocytic leukemia
Johansson, P., Bergmann, A. K., Rahmann, S., Wohlers, I., Scholtysik, R., Przekopowitz, M., Seifert, M., Tschurtschenthaler, G., Webersinke, G., Jaeger, U., et al. (2015) · International Journal of Cancer · doi:10.1002/ijc.29697 · Cited by 37
Gasparini, V. R., Binatti, A., Coppe, A., Teramo, A., Vicenzetto, C., Calabretto, G., Barilà, G., Barizza, A., Giussani, E., Facco, M., et al. (2020) · Blood Cancer Journal · doi:10.1038/s41408-020-0309-2 · Cited by 37
Boudewijns, M., van Dongen, J. J. M., & Langerak, A. W. (2007) · Journal of Molecular Diagnostics · doi:10.2353/jmoldx.2007.060155 · Cited by 31
Bárcena, P., Jara‐Acevedo, M., Tabernero, M. D., López, A., Sánchez, M. L., García‐Montero, A. C., Muñoz‐García, N., Vídriales, M., Paiva, A. A., Lécrevisse, Q., et al. (2015) · Oncotarget · doi:10.18632/oncotarget.5480 · Cited by 30
State of the art in natural killer cell malignancies
Semenzato, G., Marino, F., & Zambello, R. (2011) · International Journal of Laboratory Hematology · doi:10.1111/j.1751-553x.2011.01374.x · Cited by 28
Gattazzo, C., Teramo, A., Miorin, M., Scquizzato, E., Cabrelle, A., Balsamo, M. L., Agostini, C., Vendrame, E., Facco, M., Albergoni, M. P., et al. (2010) · Haematologica · doi:10.3324/haematol.2010.023358 · Cited by 28
Zambello, R., Teramo, A., Barilà, G., Gattazzo, C., & Semenzato, G. (2014) · Frontiers in Immunology · doi:10.3389/fimmu.2014.00072 · Cited by 26
Mel, S. D., Li, J. B., Abid, M. B., Tang, T. P. L., Tay, H. M., Ting, W. C., Poon, L. M., Chung, T., Mow, B. M. F., Tso, A. C. Y., et al. (2017) · Cytometry Part B Clinical Cytometry · doi:10.1002/cyto.b.21529 · Cited by 26
Derouault, P., Chauzeix, J., Rizzo, D., Miressi, F., Magdelaine, C., Bourthoumieu, S., Durand, K., Beauvais‐Dzugan, H., Feuillard, J., Sturtz, F. G., et al. (2020) · PLoS Computational Biology · doi:10.1371/journal.pcbi.1007503 · Cited by 25
Barilà, G., Teramo, A., Calabretto, G., Ercolin, C., Boscaro, E., Trimarco, V., Carraro, S., Leoncin, M., Vicenzetto, C., Cabrelle, A., et al. (2018) · Blood Cancer Journal · doi:10.1038/s41408-018-0088-1 · Cited by 24
Kawakami, T., Sekiguchi, N., Kobayashi, J., Yamane, T., Nishina, S., Sakai, H., Hirabayashi, Y., Nakazawa, H., & Ishida, F. (2019) · International Journal of Hematology · doi:10.1007/s12185-019-02625-x · Cited by 24
Raess, P. W., Cascio, M. J., Fan, G., Press, R. D., Druker, B. J., Brewer, D., & Spurgeon, S. E. F. (2016) · American Journal of Hematology · doi:10.1002/ajh.24586 · Cited by 18
Ahn, J., Kim, H., Kim, Y., Lee, S.-S., Ahn, S., Jung, S., Yang, D., Lee, J., Park, H. J., Choi, S. H., et al. (2016) · Oncotarget · doi:10.18632/oncotarget.14171 · Cited by 7
Cited by
Clonal haematopoiesis and dysregulation of the immune system
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Metadata
- Authors
- Pastoret, C., Desmots, F., Drillet, G., Le Gallou, S., Boulland, M.-L., Thannberger, A., Doncker, A.-V., Salaun, V., Damaj, G. L., Veyrat-Masson, R., Tournilhac, O., Moignet, A., Pangault, C., Roussel, M., Fest, T., & Lamy, T.
- Affiliations
- Laboratoire d’Hématologie, Centre Hospitalier Universitaire de Rennes, Rennes, France;
- Service d’Hématologie Clinique, Centre Hospitalier Universitaire (CHU) de Rennes, Rennes, France;
- Service d’Hématologie Clinique, Hôpital de Saint Malo, Saint Malo, France;
- Hôpital Privé Sévigné, Cesson-Sévigné, France;
- Laboratoire d’Hématologie and
- Service d’Hématologie Clinique, CHU de Caen Normandie, Caen, France;
- Service d’Hématologie Clinique, CHU de Clermont-Ferrand, Clermont-Ferrand, France; and
- INSERM, Unité Mixte de Recherche (UMR) 1236, Etablissement Français du sang Bretagne, Université Rennes 1, Rennes, France;
- Venue
- Blood
- Publisher
- American Society of Hematology
- Published
- 2021-01-15
- Volume
- 137
- Issue
- 23
- Pages
- 3237-3250
- ISSN
- 0006-4971
- 1528-0020
- Cited by
- 63
- References
- 51
- Language
- en
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