Comprehensive genome-wide transcription factor analysis reveals that a combination of high affinity and low affinity DNA binding is needed for human gene regulation

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Sequence-based modeling of low-affinity transcription factor–DNA binding through deep learning

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Bipartite DNA binding domain of transcription factor BCL11B binds clustered short DNA sequence motifsPreprint

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RESEARCH Open Access Comprehensive

(2016)

BayesPI - a new model to study protein-DNA interactions: a case study of condition-specific protein binding parameters for Yeast transcription factors

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Extensive low-affinity transcriptional interactions in the yeast genomePreprint

Tanay, A. (2006) · Genome Research · doi:10.1101/gr.5113606 · Cited by 244 · see citing works

Multiple overlapping binding sites determine transcription factor occupancy

Khetan, S., Carroll, B. S., & Bulyk, M. L. (2025) · Nature · doi:10.1038/s41586-025-09472-3 · Cited by 29 · see citing works

Accurate and sensitive quantification of protein-DNA binding affinity

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