Three myths about risk thresholds for prediction models
Open accessAbstract
BACKGROUND: Clinical prediction models are useful in estimating a patient's risk of having a certain disease or experiencing an event in the future based on their current characteristics. Defining an appropriate risk threshold to recommend intervention is a key challenge in bringing a risk prediction model to clinical application; such risk thresholds are often defined in an ad hoc way. This is problematic because tacitly assumed costs of false positive and false negative classifications may not be clinically sensible. For example, when choosing the risk threshold that maximizes the proportion of patients correctly classified, false positives and false negatives are assumed equally costly. Furthermore, small to moderate sample sizes may lead to unstable optimal thresholds, which requires a particularly cautious interpretation of results. MAIN TEXT: We discuss how three common myths about risk thresholds often lead to inappropriate risk stratification of patients. First, we point out the contexts of counseling and shared decision-making in which a continuous risk estimate is more useful than risk stratification. Second, we argue that threshold selection should reflect the consequences of the decisions made following risk stratification. Third, we emphasize that there is usually no universally optimal threshold but rather that a plausible risk threshold depends on the clinical context. Consequently, we recommend to present results for multiple risk thresholds when developing or validating a prediction model. CONCLUSION: Bearing in mind these three considerations can avoid inappropriate allocation (and non-allocation) of interventions. Using discriminating and well-calibrated models will generate better clinical outcomes if context-dependent thresholds are used.
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Classification of risk into categories may lead to information loss by treating every within-category participant as equal for risk.
“While including only studies with multiple use frequency categories, classification of risk into categories may lead to information loss by treating every within-category participant as equal for risk (Wynants et al., 2019).”
From Risk-thresholds for the association between frequency of cannabis use and the development of psychosis: a systematic review and meta-analysis (2023) · cites this paper as Wynants et al., 2019
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References 46 · Cited by 213
- Authors
- on behalf of the Topic Group ‘Evaluating diagnostic tests and prediction models’ of the STRATOS initiative, Wynants, L., van Smeden, M., McLernon, D. J., Timmerman, D., Steyerberg, E. W., & Van Calster, B.
- Affiliations
- KU Leuven (BE)
- Leiden University Medical Center (NL)
- University of Aberdeen (GB)
- Corresponding author
- Wynants, Laure
- Venue
- BMC Medicine
- Published
- 2019-10-25
- Volume
- 17
- Issue
- 1
- Pages
- 192-192
- ISSN
- 1741-7015 (ISSN-L)
- PMC
- PMC6814132
- OpenAlex
- W2981991941
- Cited by
- 213
- References
- 46
- Citations by year
- 2026: 43 · 2025: 23 · 2024: 32 · 2023: 36 · 2022: 23 · 2021: 41 · 2020: 14 · 2019: 1
- FWCI
- 15.45
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Locations
- BMC Medicine (publishedVersion, cc-by)
- Europe PMC (PubMed Central) (publishedVersion, cc-by)
- PubMed Central (publishedVersion, cc-by)
- PubMed (publishedVersion)
- Research Publications (Maastricht University) (publishedVersion, cc-by)
- Aberdeen University Research Archive (Aberdeen University) (submittedVersion)
- Lirias (KU Leuven) (submittedVersion, other-oa)
- Data Archiving and Networked Services (DANS) (submittedVersion)
- Leiden Repository (Leiden University) (submittedVersion)
- DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion)
- Research Publications (Maastricht University) (submittedVersion, other-oa)
- Funders
- Fonds Wetenschappelijk Onderzoek (12R0219N)
- Topics
- Physical Sciences › Mathematics › Statistics and Probability › Statistical Methods in Epidemiology
- Health Sciences › Medicine › Family Practice › Clinical Reasoning and Diagnostic Skills
- Health Sciences › Health Professions › Health Information Management › Artificial Intelligence in Healthcare
- Keywords
- risk thresholds, clinical prediction model, risk stratification, shared decision-making, counseling, threshold selection, small sample size, model calibration, model discrimination
- MeSH terms
- Data Interpretation, Statistical, Forecasting, Humans, Longitudinal Studies, Models, Theoretical, Mythology, Models, Statistical, Risk Assessment
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