Correlation between mutation burden of tumor and immunological/clinical parameters in considering biomarkers of immune checkpoint inhibitors for non-small cell lung cancer (NSCLC)
Abstract
e23184 Background: There has been reported that mutation burden of solid tumor might probably be a predictive biomarker of efficacy of immune check point inhibitors, and the number of researches are still ongoing. Although the correlation of mutation burden between by whole exome sequence and by large targeted panel sequence has also been reported, neither method can be said to have solved technical and economical difficulty of using in clinical practice. Here we describe more convenient factors that can be used instead of mutation burden. Methods: 92 NSCLC patients with surgery during 2013-2015 in our institution were subjected for this study. Mutation burden in tumor samples was analyzed by whole exome sequence using Next Generation Sequencer. The major gene alteration was also analyzed by small targeted panel sequence. As immunological parameters, tumor infiltrating lymphocyte and PD-L1 expression in tumor were assessed by immunohistochemistry test using anti-CD8 antibody and anti-PD-L1 antibody. Statistical analysis was performed on mutation burden and the result of major gene alternation, immunohistochemistry, and clinical parameters. Results: There were 64 adenocarcinomas and 28 squamous cell carcinomas. The median value of mutation burden was 60 genes (10-502). The factors including squamous cell carcinoma, male, smoking history, EGFR-mutation negative, and TP53 alteration positive indicated close connection with higher mutation burden (p < 0.001) There were no significant difference in PD-L1 expression of tumor and tumor infiltrating lymphocyte. Multiple regression analysis showed that negative EGFR-mutation and positive TP53 alteration contribute to higher mutation burden (p < 0.05). Conclusions: Mutation burden in NSCLC tumor could be associated with EGFR-mutation and TP53 alteration status. These findings suggest that some major gene alteration make it possible to predict mutation burden, and could potentially be more simple predictive biomarkers of immune check point inhibitors.
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Several preclinical studies suggested that tumors harboring KRAS mutations might be associated with a vulnerability to immunotherapies, in particular those with concomitant TP53 mutations.
“Interestingly, several preclinical studies suggested that tumors harboring KRAS mutations might be associated with a vulnerability to immunotherapies, in particular those with concomitant TP53 mutations (29, 92, 93).”
From New Horizons in KRAS-Mutant Lung Cancer: Dawn After Darkness (2019) · cites this paper as [93]
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New Horizons in KRAS-Mutant Lung Cancer: Dawn After Darkness
Yang, H., Liang, S.-Q., Schmid, R. A., & Peng, R.-W. (2019) · Frontiers in Oncology · doi:10.3389/fonc.2019.00953 · Cited by 129 · see citing works
“Interestingly, several preclinical studies suggested that tumors harboring KRAS mutations might be associated with a vulnerability to immunotherapies, in particular those with concomitant TP53 mutations (29, 92, 93).”
BackgroundTumor mutational burden in lung cancer: a systematic literature review
Willis, C., Fiander, M., Tran, D., Korytowsky, B., Thomas, J.-M., Calderon, F., Zyczynski, T. M., Brixner, D. I., & Stenehjem, D. D. (2019) · Oncotarget · doi:10.18632/oncotarget.27287 · Cited by 95 · see citing works
“Five publications presented data on TMB in NSCLC stratified by squamous or adenocarcinoma histology (Table 4) [51, 54, 60, 66, 67].”
BackgroundResultInfluential33rd Annual Meeting & Pre-Conference Programs of the Society for Immunotherapy of Cancer (SITC 2018)
Golinelli, G., Dominici, M., Grisendi, G., Spano, C., Rossignoli, F., & Prapa, M. (2018) · Journal for ImmunoTherapy of Cancer · doi:10.1186/s40425-018-0422-y · Cited by 45 · see citing works
The genomic and epigenomic evolutionary history of papillary renal cell carcinomas
Zhu, B., Poeta, M. L., Costantini, M., Zhang, T., Shi, J., Sentinelli, S., Wei, Z., Pompeo, V., Cardelli, M., Alexandrov, B. S., et al. (2020) · Nature Communications · doi:10.1038/s41467-020-16546-5 · Cited by 37 · see citing works
Willis, C., Bauer, H., Au, T. H., et al. (2022) · Oncotarget · doi:10.18632/oncotarget.28178 · Cited by 7 · see citing works
“However, previous research showing associations between males and higher TMB levels were conducted in other populations with different methodologies and smaller sample sizes [22, 28–30].”
Frega, S., Ferro, A., Bonanno, L., Guarneri, V., Conte, P., & Pasello, G. (2021) · Precision Cancer Medicine · doi:10.21037/pcm-21-7 · Cited by 3 · see citing works
“In particular, TMB resulted higher in males and 10fold higher in smokers than in never-smokers (105,106).”
Background
- Authors
- Owada, Y., Muto, S., Takagi, H., Inoue, T., Watanabe, Y., Yamaura, T., Fukuhara, M., Okabe, N., Matsumura, Y., Hasegawa, T., Ohsugi, J., Tanaka, D., Ito, E., Nanamiya, H., Imai, J.-I., Isogai, T., Watanabe, S., & Suzuki, H.
- Affiliations
- Fukushima Medical University (JP)
- ORCID
- Venue
- Journal of Clinical Oncology
- Published
- 2017-05-20
- Volume
- 35
- Issue
- 15_suppl
- Pages
- e23184-e23184
- ISSN
- 0732-183X (ISSN-L)
- 1527-7755
- OpenAlex
- W2889940587
- Cited by
- 6
- References
- 0
- Citations by year
- 2022: 1 · 2021: 1 · 2020: 1 · 2019: 2 · 2018: 1
- Type
- conference abstract
- Language
- en
- Open access
- closed
- Locations
- Journal of Clinical Oncology (publishedVersion)
- Topics
- Health Sciences › Medicine › Oncology › Cancer Immunotherapy and Biomarkers
- Health Sciences › Medicine › Pulmonary and Respiratory Medicine › Lung Cancer Treatments and Mutations
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cancer Research › Cancer Genomics and Diagnostics
- Keywords
- tumor mutational burden, non-small cell lung cancer, immune checkpoint inhibitors, predictive biomarkers, EGFR mutation, TP53 alterations, PD-L1 expression, tumor-infiltrating lymphocytes, exome sequencing, targeted panel sequencing, smoking history, squamous cell carcinoma, adenocarcinoma
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