Single cell transcriptomics reveals spatial and temporal dynamics of gene expression in the developing mouse spinal cord

Cited by (356)

Items 201–300 of 356

1. The mammalian locomotor CPG: revealing the contents of the black box
   Simon Gosgnach · 2024 · Journal of Neurophysiology
2. Excitatory spinal Lhx9-derived interneurons modulate locomotor frequency in mice
   Maëlle Bertho, Vanessa Caldeira, Li Hsu, Peter Löw, Lotta Borgius, Ole Kiehn · 2024 · Journal of Neuroscience
3. Spinal lumbar dI2 interneurons contribute to stability of bipedal stepping
   Baruch Haimson, Yoav Hadas, Nimrod Bernat, Artur Kania, Monica A. Daley, Yuval Cinnamon, Aharon Lev‐Tov, Avihu Klar · 2021 · eLife
4. Amphibian behavioral diversity offers insights into evolutionary neurobiology
   Aditya A Iyer, Kevin L. Briggman · 2021 · Current Opinion in Neurobiology
5. How a cell decides its own fate: a single-cell view of molecular mechanisms and dynamics of cell-type specification
   Maria Mircea, Stefan Semrau · 2021 · Biochemical Society Transactions
6. Characterization of a novel Lbx1 mouse loss of function strain
   Lyvianne Decourtye, Jeremy A. McCallum-Loudeac, Sylvia Zellhuber-McMillan, Emma Young, Kathleen J. Sircombe, Megan J. Wilson · 2021 · Differentiation
7. Sox14 is essential for initiation of neuronal differentiation in the chick spinal cord
   Taiki Katsuyama, Minori Kadoya, Manabu Shirai, Noriaki Sasai · 2021 · Developmental Dynamics
8. Deep dynamical modelling of developmental trajectories with temporal transcriptomics
   Rory J. Maizels, Daniel M. Snell, James Briscoe · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
9. Proliferation history and transcription factor levels drive direct conversion
   Nathan Wang, Brittany A Lende-Dorn, Honour O Adewumi, Adam M. Beitz, Patrick Han, Timothy Mark O’Shea, Kate E. Galloway · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
10. Spinal V1 inhibitory interneuron clades differ in birthdate, projections to motoneurons, and heterogeneity
    Andrew E. Worthy, JoAnna T. Anderson, Alicia R. Lane, Laura J Gomez-Perez, Anthony A. Wang, Ronald W Griffith, Andre F. Rivard, Jay B. Bikoff, Francisco J. Álvarez · 2024 · eLife
11. Spinal motor neuron development and metabolism are transcriptionally regulated by nuclear factor IA
    Julia Gauberg, Kevin B. Moreno, Karthik Jayaraman, Sara Abumeri, Sarah Jenkins, Alisa M. Salazar, Hiruy S. Meharena, Stacey M. Glasgow · 2025 · Science Advances
12. Updating perspectives on spinal cord function: motor coordination, timing, relational processing, and memory below the brain
    James W. Grau, Kelsey E. Hudson, David Travis Johnston, Sienna R. Partipilo · 2024 · Frontiers in Systems Neuroscience
13. The developmental hourglass model is applicable to the spinal cord based on single‐cell transcriptomes and non‐conserved cis ‐regulatory elements
    Katsuki Mukaigasa, Chie Sakuma, Hiroyuki Yaginuma · 2021 · Development Growth & Differentiation
14. Identification of KLF6/PSGs and NPY-Related USF2/CEACAM Transcriptional Regulatory Networks via Spinal Cord Bulk and Single-Cell RNA-Seq Analysis
    Xinbing Liu, Wei Gao, Wei Liu · 2021 · Disease Markers
15. Heads or tails: making the spinal cord
    Julia Needham, Vicki Metzis · 2022 · Developmental Biology
16. Sequential and additive expression of miR-9 precursors control timing of neurogenesis
    Ximena Soto, Joshua Burton, Cerys S Manning, Thomas George Minchington, Robert Lea, Jessica Lee, Jochen Kursawe, Magnus Rattray, Nancy Papalopulu · 2022 · Development
17. Morphogen gradients can convey position and time in growing tissues
    Roman Vetter, Dagmar Iber · 2025 · Newton
18. Accelerated differentiation of human induced pluripotent stem cells into regionally specific dorsal and ventral spinal neural progenitor cells for application in spinal cord therapeutics
    Anne Huntemer-Silveira, Dane Malone, Anna Frie, Patrick Walsh, Ann Margaret Parr · 2023 · Frontiers in Neuroscience
19. Recent advances in our understanding of central and peripheral nervous system progenitors
    Polina Kameneva, Igor I. Adameyko · 2019 · Current Opinion in Cell Biology
20. Concurrent temporal patterning of neural stem cells in the fly visual system
    Urfa Arain, Ishrat Maliha Islam, Priscilla Valentino, Ted Erclik · 2022 · bioRxiv (Cold Spring Harbor Laboratory)
21. Concurrent temporal patterning of neural stem cells in the fly visual system
    Priscilla Valentino, Ishrat Maliha Islam, Urfa Arain, Ted Erclik · 2025 · Nature Communications
22. Potential Roles of Specific Subclasses of Premotor Interneurons in Spinal Cord Function Recovery after Traumatic Spinal Cord Injury in Adults
    Ana Lucía Dominguez, Frédéric Clotman · 2024 · Cells
23. A method to investigate muscle target‐specific transcriptional signatures of single motor neurons
    Bianka Berki, Fabio Sacher, Antoine Fages, Patrick Tschopp, Maëva Luxey · 2022 · Developmental Dynamics
24. Analyses of binding partners and functional domains for the developmentally essential protein Hmx3a/HMX3
    William Haws, Samantha J. England, Ginny Grieb, Gabriela Susana, Sophie Hernandez, Hunter Mirer, Katharine E. Lewis · 2023 · Scientific Reports
25. Dysregulation of Aldh1a2 underlies motor neuron degeneration in spinal muscular atrophy
    Mayumi Kataoka, Kentaro Sahashi, Koyo Tsujikawa, Jun‐ichi Takeda, Tomoki Hirunagi, Madoka Iida, Masahisa Katsuno · 2023 · Neuroscience Research
26. Autonomous action and cooperativity between the ONECUT2 transcription factor and its 3′ untranslated region
    Kenneth Steadman, Sungyong You, Dustin Srinivas, Lila Mouakkad, Yiwu Yan, Minhyung Kim, Smrruthi Vaidegi Venugopal, Hisashi Tanaka, Michael R. Freeman · 2023 · Frontiers in Cell and Developmental Biology
27. Compact transcription factor cassettes generate functional, engraftable motor neurons by direct conversion
    Nathan Wang, Honour O Adewumi, Brittany A Lende-Dorn, Adam M. Beitz, Timothy Mark O’Shea, Kate E. Galloway · 2025 · Cell Systems
28. Echidna: integrated simulations of single-cell immune receptor repertoires and transcriptomes
    Jiami Han, Solène Masserey, Danielle Shlesinger, Raphael Kuhn, Chrysa Papadopoulou, Andreas Agrafiotis, Victor Kreiner, Raphael Dizerens, Kai‐Lin Hong, Cédric R. Weber et al. · 2022 · Bioinformatics Advances
29. Hedgehog signaling activates a heterochronic gene regulatory network to control differentiation timing across lineages
    Megan Rowton, Carlos Perez-Cervantes, Ariel B. Rydeen, Suzy S. J. Hur, Jessica Jacobs-Li, Nikita Deng, Emery Lu, Alexander Guzzetta, Jeffrey D. Steimle, Andrew Daniel Hoffmann et al. · 2018 · bioRxiv (Cold Spring Harbor Laboratory)
30. scMomentum: Inference of Cell-Type-Specific Regulatory Networks and Energy Landscapes
    Larisa M. Soto, Juan P. Bernal-Tamayo, Robert Lehmann, Subash Balsamy, Xabier Martinez‐de‐Morentin, Amaia Vilas‐Zornoza, Patxi San-Martin, Felipe Prósper, David Gómez-Cabrero, Narsis A. Kiani et al. · 2020 · bioRxiv (Cold Spring Harbor Laboratory)
31. Human-specific progenitor sub-domain contributes to extended neurogenesis and increased motor neuron production
    Sumin Jang, Elias Gunmit, H. Wichterle · 2022 · bioRxiv
32. Spinal neuron diversity scales exponentially with swim-to-limb transformation during frog metamorphosis
    David Vijatovic, Florina Alexandra Toma, Zoe P. M. Harrington, Christopher Sommer, Robert Hauschild, Alexandra J. Trevisan, Phillip Chapman, Mara J. Julseth, Susan Brenner‐Morton, Mariano I. Gabitto et al. · 2024 · bioRxiv (Cold Spring Harbor Laboratory)
33. Hierarchical lineage architecture of human and avian spinal cord revealed by single-cell genomic barcoding
    Giulia L. M. Boezio, Jasper R. L. Depotter, Thomas J.R. Frith, Arthur Radley, Stephanie Strohbuecker, Ana C. Cunha, Michael T. Howell, James Briscoe · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
34. Analysis of spatiotemporal dynamic patterns of gene expression during mouse embryonic development based on Moran’s I and spatial transcriptomics
    Qi-Chao 啟超 Li 李, Hai 海 Lin 林, Peng Wang, Qiutong 秋彤 Dong 董, Kun 坤 Wang 王, Jian-Wei 建伟 Shuai 帅, Fang-fu Ye · 2025 · Chinese Physics B
35. Marsupial single-cell transcriptomics identifies temporal diversity in mammalian developmental programs
    Sergio Menchero, Christopher Barrington, Clare Critcher, Wazeer Varsally, Gregorio Alanis‐Lobato, Kathy K. Niakan, James M. A. Turner · 2025 · Developmental Cell
36. Redefining the central pattern generator for vertebrate locomotion
    Abdeljabbar El Manira · 2026 · Nature reviews. Neuroscience
37. Multifold increase in spinal inhibitory cell types with emergence of limb movement
    David Vijatovic, Florina Alexandra Toma, Yuri Ignatyev, Zoe P. M. Harrington, Christoph Sommer, Robert Hauschild, Matthjis Smits, Marco Dalla Vecchia, Alexandra J. Trevisan, Phillip Chapman et al. · 2026 · Cell Reports
38. Astrocytic Ryk signaling coordinates scarring and wound healing after spinal cord injury
    Zhe Shen, Bo Feng, Wei Ling Lim, Timothy Woo, Yanlin Liu, Silvia Vicenzi, Jingyi Wang, Brian Kwon, Yimin Zou · 2025 · Proceedings of the National Academy of Sciences
39. Evolution of the expression and regulation of the nuclear hormone receptor ERR gene family in the chordate lineage
    Vasileios Papadogiannis, Dorit Hockman, Silvia Mercurio, Claire E. Ramsay, Mark Hintze, Cédric Patthey, Andrea Streit, Sebastian M. Shimeld · 2023 · Developmental Biology
40. New insights into CNS development from multiomics approaches
    Laura Solanelles-Farré, Ludovic Telley · 2020 · Current Opinion in Neurobiology
41. Single-nucleus transcriptomic atlas of spinal cord neuron in human
    Donghang Zhang, Yiyong Wei, Jin Liu, Hongjun Chen, Jin Li, Tao Zhu, Cheng Zhou · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
42. A branching model of cell fate decisions in the enteric nervous system
    Anna Laddach, Song Hui Chng, Reena Lasrado, Fränze Progatzky, Michael Shapiro, Artem V. Artemov, Marisol Sampedro Castañeda, Alek G. Erickson, Ana Carina Bon‐Frauches, Jens Kleinjung et al. · 2022 · bioRxiv (Cold Spring Harbor Laboratory)
43. A spinal synergy of excitatory and inhibitory neurons coordinates ipsilateral body movements
    Marito Hayashi, Miriam Gullo, Gokhan Senturk, Stefania Di Costanzo, Shinji C. Nagasaki, Ryoichiro Kageyama, Itaru Imayoshi, Martyn Goulding, Samuel L. Pfaff, Graziana Gatto · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
44. Circuit Modules for Flexible Locomotion
    Laurence D. Picton, Irene Pallucchi, Pierre Fontanel, Maria Bertuzzi, Jianren Song, Abdeljabbar El Manira · 2025 · Annual Review of Neuroscience
45. SERTM2: a neuroactive player in the world of micropeptides
    Michela Lisi, Tiziana Santini, T. D'Andrea, Beatrice Salvatori, A. Setti, A. Paiardini, Sofia Nutarelli, Carmine Nicoletti, Flaminia Pellegrini, Sergio Fucile et al. · 2025 · EMBO Reports
46. An integrated transcriptomic approach for identifying enhancers in limb motor pools
    In Seo Yeo, Dojin Jeong, Yunjeong Lee, Jae‐Woo Ahn, Se-Eun Bae, Mi‐Ryoung Song · 2025 · Scientific Reports
47. Dual transcriptional activities of PAX3 and PAX7 spatially encode spinal cell fates through distinct gene networks
    Robin Rondon, Théaud Hezez, Julien Richard Albert, Shinichiro Hayashi, Bernadette Drayton‐Libotte, Gloria González Curto, Frédéric Aurade, Élie Balloul, Claire Dugast‐Darzacq, Frédéric Relaix et al. · 2025 · PLoS Biology
48. Transcriptomic and spatial organization of mouse spinal cord projection neurons
    Jun-Kai Lin, Yuan Liu, Juan Deng, Lin-Han Wang, Qing Li, Liu Chen, Wen-Qun Ding, Ai‐Hui Tang, Yannong Dou, Yan-Gang Sun · 2025 · Cell Reports
49. Generation and characterization of a tamoxifen‐inducible Vsx1‐CreERT2 line to target V2 interneurons in the mouse developing spinal cord
    Charlotte Baudouin, Barbara Pelosi, Guillaume E. Courtoy, Younès Achouri, Frédéric Clotman · 2021 · genesis
50. Insights into the mechanisms of neuron generation and specification in the zebrafish ventral spinal cord
    Gokhan Cucun, Melina Köhler, Sabrina Pfitsch, Sepand Rastegar · 2023 · FEBS Journal
51. Molecular analyses of zebrafish V0v spinal interneurons and identification of transcriptional regulators downstream of Evx1 and Evx2 in these cells
    Samantha J. England, Amber K. Rusnock, Amra Mujcic, Angelica M. Kowalchuk, Sarah de Jager, William C. Hilinski, José L. Juárez‐Morales, Matthew E. Smith, Ginny Grieb, Santanu Banerjee et al. · 2023 · Neural Development
52. A low-level Cdkn1c/p57kip2 expression in spinal progenitors drives the transition from proliferative to neurogenic modes of division
    Baptiste Mida, Nathalie Lehmann, Rosette Goïame, Fanny Coulpier, Kamal Bouhali, Isabelle Barbosa, Hervé Le Hir, Morgane Thomas‐Chollier, Evelyne A. Fischer, Xavier Morin · 2025 · EMBO Reports
53. Single cell transcriptomics identifies master regulators of neurodegeneration in SOD1 ALS motor neurons
    Seema Chandramohan Namboori, Patricia Thomas, Ryan M. Ames, Sophie Hawkins, Lawrence O. Garrett, Craig R. G. Willis, Alessandro Rosa, Lawrence Walter Stanton, Akshay Bhinge · 2019 · bioRxiv (Cold Spring Harbor Laboratory)
54. Benchmarking of lightweight-mapping based single-cell RNA-seq pre-processing
    A. Sina Booeshaghi, Lior S. Pachter · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
55. Single-cell transcriptomic analysis unveils spinal motor neuron subtype diversity underpinning the water-to-land transition in vertebrates
    Ee Shan Liau, Suoqin Jin, Yen‐Chung Chen, Wei-Szu Liu, Luok Wen Yong, Chang-Tai Tsai, Maëliss Calon, Jr‐Kai Yu, Yi‐Hsien Su, Stéphane Nedelec et al. · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
56. The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury
    Michael A. Skinnider, Matthieu Gautier, Alan Yue Yang Teo, Claudia Kathe, Thomas Haynes Hutson, Achilleas Laskaratos, Alexandra de Coucy, Nicola Regazzi, Viviana Aureli, Nicholas D. James et al. · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
57. A spinal synergy of excitatory and inhibitory neurons coordinates ipsilateral body movements
    Marito Hayashi, Miriam Gullo, Gokhan Senturk, Stefania Di Costanzo, Shinji C. Nagasaki, Ryoichiro Kageyama, Itaru Imayoshi, Martyn Goulding, Samuel L. Pfaff, Graziana Gatto · 2023
58. Single-cell transcriptome of developing inhibitory neurons reveals expanding and contracting modes of diversification
    Minhui Liu, Facundo Ferrero Restelli, Elia Micoli, Giulia Barbiera, Rani Moors, Evelien Nouboers, Malou Reverendo, Jessica Xinyun Du, Hannah Bertels, Dimitris Konstantopoulos et al. · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
59. Innovations in spinal cord cell type heterogeneity across vertebrate evolution
    Yuri Ignatyev, Stavros Papadopoulos, Mateja Soretić, Jake Yeung, Tzi‐Yang Lin, Elly Margaret Tanaka, Leonid Peshkin, Ariel J. Levine, Mariano I. Gabitto, Lora B. Sweeney · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
60. ASCL1 protein domains with distinct functions in neuronal differentiation and subtype specification
    Yuji Nakada, Madison J Martinez, Jane E. B. Johnson · 2025 · Developmental Biology
61. bayesReact: expression-coupled regulatory motif analysis detects microRNA activity across cancers, tissues, and at the single-cell level
    Asta Mannstaedt Rasmussen, Alexandre Bouchard‐Côté, Jakob Skou Pedersen · 2026 · Nucleic Acids Research
62. Molecular signatures of cell diversity modulated by long noncoding RNAs in the human fetal spinal cord
    Nan Miao, Trevor Lee, Liying Chen, Hegan Zhang, Jing H Wang, Julianne Sun, Jason Sun, Yongqiang Sha, Shiying Huang, Tao Sun · 2026 · iScience
63. Evidence for chronological diversification of spinal neuron subtypes by a shared sequence of transcription factors
    Laia Caudet-Segarra, Kevin T. Sangster, Julia Sagner, Artur Kania, Andreas Sagner · 2026 · Science Advances
64. Temporal trajectories underlying adult neuronal diversity
    Tulsi Patel · 2026 · Current Opinion in Genetics & Development
65. Advances in single-cell epigenomics of the immune system
    Jonas Schulte-Schrepping, Humberto J. Ferreira, Adem Saglam, Emily R. Hinkley, Joachim Ludwig Schultze · 2020 · Elsevier eBooks
66. Single-cell chromatin accessibility profiling of cell-state-specific gene regulatory programs during mouse organogenesis
    Qiuting Deng, Shengpeng Wang, Zijie Huang, Qing Lan, Guangyao Lai, Jiangshan Xu, Yue Yuan, Chang Xin Liu, Xiumei Lin, Weimin Feng et al. · 2023 · Frontiers in Neuroscience
67. Development and Developmental Disorders of the Spinal Cord
    Hans J. ten Donkelaar, Kyoko Itoh, Hajime Miyata, Akira Hori · 2023 · Springer eBooks
68. Single-cell RNAseq analysis of spinal locomotor circuitry in larval zebrafish
    Jimmy J. Kelly, Hua Wen, Paul Brehm · 2023 · eLife
69. LncRNA Litchi is a regulator for harmonizing maturity and resilient functionality in spinal motor neurons
    Ho-Chiang Hsu, Sheng-Ping Hsu, Fang‐Yu Hsu, Mien Chang, Jun‐An Chen · 2024 · iScience
70. Lhx4 surpasses its paralog Lhx3 in promoting the differentiation of spinal V2a interneurons
    Estelle Renaux, Charlotte Baudouin, Damien Marchese, Yoanne M. Clovis, Soo‐Kyung Lee, Françoise Gofflot, René Rezsöhazy, Frédéric Clotman · 2024 · Cellular and Molecular Life Sciences
71. A single-cell atlas of spatial and temporal gene expression in the mouse cranial neural plate
    Eric Brooks, Andrew R Moorman, Bhaswati Bhattacharya, Ian S Prudhomme, Max Land, Heather L. Alcorn, Roshan Sharma, Dana Pe’er, Jennifer A. Zallen · 2025 · eLife
72. Arid3c identifies an uncharacterized subpopulation of V2 interneurons during embryonic spinal cord development
    Estelle Renaux, Charlotte Baudouin, Olivier Schakman, Ondine Gay, Manon Martin, Damien Marchese, Younès Achouri, René Rezsöhazy, Françoise Gofflot, Frédéric Clotman · 2024 · Frontiers in Cellular Neuroscience
73. Single-Cell Transcriptomics in Spinal Cord Studies: Progress and Perspectives
    Maiweilan Maihemuti, Mst. Afsana Mimi, S. M. Sohag, Md. Mahmudul Hasan · 2025 · BioChem
74. Spatiotemporal dynamics of neuron differentiation and migration in the developing human spinal cord
    Yuan Yu, Mengjie Pan, Quanyou Cai, Ziyu Feng, Baomei Cai, Kaixuan Lin, Shangtao Cao, Lihui Lin, Lihui Lin, Yanlin Ma et al. · 2025 · Journal of genetics and genomics/Journal of Genetics and Genomics
75. TRAP-based allelic translation efficiency imbalance analysis to identify genetic regulation of ribosome occupancy in specific cell types in vivo
    Yating Liu, Anthony D. Fischer, Celine L. St. Pierre, Juan F Macias-Velasco, Heather A. Lawson, Joseph D. Dougherty · 2020 · bioRxiv (Cold Spring Harbor Laboratory)
76. Tipping-point analysis uncovers critical transition signals from gene expression profiles
    Xinan Holly Yang, Zhezhen Wang, Andrew Goldstein, Yuxi Sun, Megan Rowton, Yanqiu Wang, Dannie Griggs, Ivan P. G. Moskowitz, John M. Cunningham · 2019 · bioRxiv (Cold Spring Harbor Laboratory)
77. The post-transcriptional regulation of TFs in immature motoneurons shapes the axon-muscle connectome
    Wenyue Guan, Stéphanie Bellemin, Mathilde Bouchet, Lalanti Venkatasubramanian, Camille Guillermin, Anne Laurençon, Chérif Kabir, Aurélien Darmas, Christophe Godin, Séverine Urdy et al. · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
78. Single cell RNA-seq analysis of spinal locomotor circuitry in larval zebrafish
    Jimmy J. Kelly, Hua Wen, Paul Brehm · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
79. Spatial transcriptomics and single-nucleus RNA sequencing reveal a transcriptomic atlas of adult human spinal cord
    Donghang Zhang, Yali Chen, Yiyong Wei, Hongjun Chen, Yujie Wu, Lin Wu, Jin Li, Qiyang Ren, Changhong Miao, Tao Zhu et al. · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
80. Spinal V1 inhibitory interneuron clades differ in birthdate, projections to motoneurons and heterogeneity
    Andrew E. Worthy, JoAnna T. Anderson, Alicia R. Lane, Laura J Gomez-Perez, Anthony A. Wang, Ronald W. Griffith, Andre F. Rivard, Jay B. Bikoff, Francisco J. Álvarez · 2024 · eLife
81. Stepwise Bayesian Machine Learning Uncovers a Novel Gene Regulatory Network Component in Neural Tube Development
    Xing Chen, Yuichi Sakumura, Toshiya Kokaji, Katsuyuki Kunida, Noriaki Sasai · 2024 · bioRxiv (Cold Spring Harbor Laboratory)
82. A single-cell atlas of spatial and temporal gene expression in the mouse cranial neural plate
    Eric Brooks, Andrew R Moorman, Bhaswati Bhattacharya, Ian S Prudhomme, Max Land, Heather L. Alcorn, Roshan Sharma, Dana Pe’er, Jennifer A. Zallen · 2024 · eLife
83. Neural plate morphogenesis and pre-patterning enable specification of intermediate progenitors in the spinal cord
    Nagarajan Nandagopal, Anna Cha, Bill Jia, Hongyu Liao, Caroline Comenho, Galit Lahav, Daniel E. Wagner, Tony Yu-Chen Tsai, Sean G. Megason · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
84. Dynamic changes in chromatin accessibility during cell fate specification at the neural plate border
    Eva Hamrud, Jacob Leese, Alexandre P Thiery, Ailin Leticia Buzzi, Alessandra Vigilante, James Briscoe, Andrea Streit · 2025 · Development
85. Transplantation of engineered spinal cord organoids restores functions after spinal cord injury
    Linlin Liu, Weiwei Xue, Yufei Kong, Huijuan Li, Qi Fan, Jingyi Shi, Huihui Liu, Jinhong Xu, Yujie Xiao, Hongli Wang et al. · 2025 · Brain
86. Whole-exome sequencing in children with dyslexia implicates rare variants in CLDN3 and ion channel genes
    Krzysztof Marianski, Joel B. Talcott, John Frederick Stein, Anthony P. Monaco, Simon E. Fisher, Dorothy Bishop, Dianne F. Newbury, Silvia Paracchini · 2025 · Human Genetics
87. Modeling GABAergic hyperexcitability in sleep bruxism patient-derived brainstem neurons using a multielectrode array platform
    Mayu Onishi, Akihiro Yamaguchi, Yuka Abe, Taro Sato, Miho Fujishima, Wado Akamatsu, Kazuyoshi Baba · 2026 · Journal of Oral Biosciences
88. Single-nucleus RNA sequencing provides insights into the genetic mechanisms underlying reproductive adaptability in Tibetan sheep (Ovis aries)
    Hui-hui Wang, Tao-tao Li, Dengpan Li, Zi-long Liu, Chun-hui Wang, Xing-xu Zhao, Yong-ju Zhao, Tian-zeng Song, Youji Ma · 2026 · Communications Biology
89. Transcriptional and cellular maturation of the chick spinal cord in the context of distinct neuromuscular circuits
    Fabio Sacher, Bianka Berki, Antoine Fages, Libby Gavrilov, Avihu Klar, Maëva Luxey, Patrick Tschopp · 2026 · iScience
90. A controllable human spinal cord model with full dorsoventral patterning
    Jeyoon Bok, Yung Su Kim, Fangyi Cheng, Chongjian Gao, Zhuowei Zhou, Norio Kobayashi, Shiyu Sun, Aoife Tang, Xufeng Xue, Diep H. Nguyen et al. · 2026 · Nature Communications
91. Temporal control of midline crossing via incoherent feedforward and feedback loops regulating Robo3
    Reut Sudakevitz-Merzbach, Madhuri Majumder, Gerard Elberg, Marah Bakhtan, Dina Rekler, Sophie Khazanov, Benjamin Joel Wheaton, Nissim Ben‐Arie, Gilgi Friedlander, Chaya Kalcheim et al. · 2026 · iScience
92. Cis-regulatory strategies in developmental patterning
    Jack PC Williams, M. Joaquina Delàs · 2026 · Current Opinion in Genetics & Development
93. Spatiotemporal control of myoblast identity drives muscle diversity in the Drosophila leg
    Camille Guillermin, Violaine Tribollet, Mathilde Bouchet, Anne Laurençon, Dan Zhou, Sergio Sarnataro, Laurent Gilquin, Isabelle Stévant, Guillaume Marcy, Emeric Texeraud et al. · 2026 · Science Advances
94. It’s me, hi, I solved the problem, it’s TF-seqFISH
    Olivia Gautier, Aaron D. Gitler · 2024 · Cell Research
95. ScnML models single-cell transcriptome to predict spinal cord neuronal cell status
    Lijia Liu, Yuxuan Huang, Yuan Zheng, Yihan Liao, Siyuan Ma, Qian Wang · 2024 · Frontiers in Genetics
96. Neph1 is required for neurite branching and is negatively regulated by the PRRXL1 homeodomain factor in the developing spinal cord dorsal horn
    João Baltar, Rafael Mendes Miranda, Maria Cabral, Sandra Rebelo, Florian Grahammer, Tobias Bruno Huber, Carlos Reguenga, Filipe Almeida Monteiro · 2024 · Neural Development
97. Exploring the biological domain of the neural embryonic stem cell test (ESTn): Morphogenetic regulators, Hox genes and cell types, and their usefulness as biomarkers for embryotoxicity screening
    Victoria C. de Leeuw, Jeroen L. A. Pennings, Ellen V.S. Hessel, Aldert H. Piersma · 2021 · Toxicology
98. Presynaptic inhibition of cutaneous afferents prevents self-generated itch
    Augusto Escalante, Rüdiger Klein · 2019 · bioRxiv (Cold Spring Harbor Laboratory)
99. Extrinsic Activin signaling cooperates with an intrinsic temporal program to increase mushroom body neuronal diversity
    Anthony M. Rossi, Claude Desplan · 2019 · bioRxiv (Cold Spring Harbor Laboratory)
100. Modular Derivation and Unbiased Single-cell Analysis of Regional Human Hindbrain And Spinal Neurons Enables Discovery of Nuanced Transcriptomic Patterns along Developmental Axes
     Nisha R. Iyer, Junha Shin, Stephanie Cuskey, Yucheng Tian, Noah R. Nicol, Tessa E. Doersch, Sunnie Grace McCalla, Sushmita Roy, Randolph Scott Ashton · 2021 · bioRxiv (Cold Spring Harbor Laboratory)