Sequence-dependent trafficking and activity of GDE2, a GPI-specific phospholipase promoting neuronal differentiation
Open accessPublished version of a preprint
Abstract
GDE2 (also known as GDPD5) is a multispanning membrane phosphodiesterase with phospholipase D-like activity that cleaves select glycosylphosphatidylinositol (GPI)-anchored proteins and thereby promotes neuronal differentiation both in vitro and in vivo. GDE2 is a prognostic marker in neuroblastoma, while loss of GDE2 leads to progressive neurodegeneration in mice; however, its regulation remains unclear. Here, we report that, in immature neuronal cells, GDE2 undergoes constitutive endocytosis and travels back along both fast and slow recycling routes. GDE2 trafficking is directed by C-terminal tail sequences that determine the ability of GDE2 to cleave GPI-anchored glypican-6 (GPC6) and induce a neuronal differentiation program. Specifically, we define a GDE2 truncation mutant that shows aberrant recycling and is dysfunctional, whereas a consecutive deletion results in cell-surface retention and gain of GDE2 function, thus uncovering distinctive regulatory sequences. Moreover, we identify a C-terminal leucine residue in a unique motif that is essential for GDE2 internalization. These findings establish a mechanistic link between GDE2 neuronal function and sequence-dependent trafficking, a crucial process gone awry in neurodegenerative diseases. This article has an associated First Person interview with the first author of the paper.
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
GDE2 trafficking and function are disrupted in neurons of patients with AD.
“Because GDE2 function requires expression on the cell surface (26, 29), these observations suggest that GDE2 trafficking and function are disrupted in neurons of patients with AD.”
From GDE2-RECK controls ADAM10 α-secretase–mediated cleavage of amyloid precursor protein (2021) · cites this paper as [29]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Cites
GDE2 Regulates Subtype-Specific Motor Neuron Generation through Inhibition of Notch Signaling
Sabharwal, P., Lee, C., Park, S., Rao, M., & Sockanathan, S. (2011) · Neuron · doi:10.1016/j.neuron.2011.07.028 · Cited by 54 · see citing works
Flagged first, then by citations
Research works printed but not linked: 39
- Agola J. O., Jim P. A., Ward H. H., Basuray S. and Wandinger-Ness A. (2011). Rab GTPases as regulators of endocytosis, targets of disease and therapeutic opportunities. Clin. Genet. 80, 305- 318. 10.1111/j.1399-0004.2011.01724.x 21651512 PMC3187864 · DOI
- Bitsikas V., Corrêa I. R. Jr and Nichols B. J. (2014). Clathrin-independent pathways do not contribute significantly to endocytic flux. eLife 3, e03970 10.7554/eLife.03970 25232658 PMC4185422 · DOI · Paper page
- Bonifacino J. S. (2014). Adaptor proteins involved in polarized sorting. J. Cell Biol. 204, 7- 17. 10.1083/jcb.201310021 24395635 PMC3882786 · DOI
- Bonifacino J. S. and Traub L. M. (2003). Signals for sorting of transmembrane proteins to endosomes and lysosomes. Annu. Rev. Biochem. 72, 395- 447. 10.1146/annurev.biochem.72.121801.161800 12651740 · DOI · Paper page
- Capurro M., Izumikawa T., Suarez P., Shi W., Cydzik M., Kaneiwa T., Gariepy J., Bonafe L. and Filmus J. (2017). Glypican-6 promotes the growth of developing long bones by stimulating Hedgehog signaling. J. Cell Biol. 216, 2911- 2926. 10.1083/jcb.201605119 28696225 PMC5584141 · DOI
- Cave C., Park S., Rodriguez M., Nakamura M., Hoke A., Pletnikov M. and Sockanathan S. (2017). GDE2 is essential for neuronal survival in the postnatal mammalian spinal cord. Mol. Neurodegener. 12, 8 10.1186/s13024-017-0148-1 28103900 PMC5244531 · DOI
- Coles C. H., Jones E. Y. and Aricescu A. R. (2015). Extracellular regulation of type IIa receptor protein tyrosine phosphatases: mechanistic insights from structural analyses. Semin. Cell Dev. Biol. 37, 98- 107. 10.1016/j.semcdb.2014.09.007 25234613 PMC4765084 · DOI
- Corda D., Mosca M. G., Ohshima N., Grauso L., Yanaka N. and Mariggiò S. (2014). The emerging physiological roles of the glycerophosphodiesterase family. FEBS J. 281, 998- 1016. 10.1111/febs.12699 24373430 · DOI
- Cosson P., Perrin J. and Bonifacino J. S. (2013). Anchors aweigh: protein localization and transport mediated by transmembrane domains. Trends Cell Biol. 23, 511- 517. 10.1016/j.tcb.2013.05.005 23806646 PMC3783643 · DOI
- Cullen P. J. and Steinberg F. (2018). To degrade or not to degrade: mechanisms and significance of endocytic recycling. Nat. Rev. Mol. Cell Biol. 19, 679- 696. 10.1038/s41580-018-0053-7 30194414 · DOI · Paper page
- De Vos K. J. and Hafezparast M. (2017). Neurobiology of axonal transport defects in motor neuron diseases: opportunities for translational research? Neurobiol. Dis. 105, 283- 299. 10.1016/j.nbd.2017.02.004 28235672 PMC5536153 · DOI
- Denzer K., Weber B., Hille-Rehfeld A., Von Figura K. and Pohlmann R. (1997). Identification of three internalization sequences in the cytoplasmic tail of the 46 kDa mannose 6-phosphate receptor. Biochem. J. 326, 497- 505. 10.1042/bj3260497 9291124 PMC1218697 · DOI
- Farhy-Tselnicker I., van Casteren A. C. M., Lee A., Chang V. T., Aricescu A. R. and Allen N. J. (2017). Astrocyte-secreted Glypican 4 regulates release of neuronal pentraxin 1 from axons to induce functional synapse formation. Neuron 96, 428- 445.e413. 10.1016/j.neuron.2017.09.053 29024665 PMC5663462 · DOI · Paper page
- Ferguson M. A. J., Hart G. W. and Kinoshita T. (2015). Glycosylphosphatidylinositol anchors. In Essentials of Glycobiology (eds Varki A., Cummings R. D., Esko J. D., Stanley P., Hart G. W., Aebi M., Darvill A. G., Kinoshita T., Packer N. H., Prestegard J. H., Schnaar R. L. and Seeberger P. H.), pp. 137- 150. Cold Spring Harbor Press, NY. 28876821
- Fujita M. and Kinoshita T. (2010). Structural remodeling of GPI anchors during biosynthesis and after attachment to proteins. FEBS Lett. 584, 1670- 1677. 10.1016/j.febslet.2009.10.079 19883648 · DOI
- Gallazzini M., Ferraris J. D. and Burg M. B. (2008). GDPD5 is a glycerophosphocholine phosphodiesterase that osmotically regulates the osmoprotective organic osmolyte GPC. Proc. Natl. Acad. Sci. USA. 105, 11026- 11031. 10.1073/pnas.0805496105 18667693 PMC2504799 · DOI
- Guardia C. M., De Pace R., Mattera R. and Bonifacino J. S. (2018). Neuronal functions of adaptor complexes involved in protein sorting. Curr. Opin. Neurobiol. 51, 103- 110. 10.1016/j.conb.2018.02.021 29558740 PMC6410744 · DOI
- Kelly B. T., McCoy A. J., Späte K., Miller S. E., Evans P. R., Höning S. and Owen D. J. (2008). A structural explanation for the binding of endocytic dileucine motifs by the AP2 complex. Nature 456, 976- 979. 10.1038/nature07422 19140243 PMC4340503 · DOI
- Kiral F. R., Kohrs F. E., Jin E. J. and Hiesinger P. R. (2018). Rab GTPases and membrane trafficking in neurodegeneration. Curr. Biol. 28, R471- R486. 10.1016/j.cub.2018.02.010 29689231 PMC5965285 · DOI
- Ko J. S., Pramanik G., Um J. W., Shim J. S., Lee D., Kim K. H., Chung G.-Y., Condomitti G., Kim H. M., Kim H. et al. (2015). PTPsigma functions as a presynaptic receptor for the glypican-4/LRRTM4 complex and is essential for excitatory synaptic transmission. Proc. Natl. Acad. Sci. USA 112, 1874- 1879. 10.1073/pnas.1410138112 25624497 PMC4330736 · DOI
- Matas-Rico E., van Veen M., Leyton-Puig D., van den Berg J., Koster J., Kedziora K. M., Molenaar B., Weerts M. J. A., de Rink I., Medema R. H. et al. (2016). Glycerophosphodiesterase GDE2 promotes neuroblastoma differentiation through glypican release and is a marker of clinical outcome. Cancer Cell 30, 548- 562. 10.1016/j.ccell.2016.08.016 27693046 · DOI
- Matthews A. L., Szyroka J., Collier R., Noy P. J. and Tomlinson M. G. (2017). Scissor sisters: regulation of ADAM10 by the TspanC8 tetraspanins. Biochem. Soc. Trans. 45, 719- 730. 10.1042/BST20160290 28620033 PMC5473022 · DOI
- Maxfield F. R. and McGraw T. E. (2004). Endocytic recycling. Nat. Rev. Mol. Cell Biol. 5, 121 10.1038/nrm1315 15040445 · DOI
- McMillan K. J., Korswagen H. C. and Cullen P. J. (2017). The emerging role of retromer in neuroprotection. Curr. Opin. Cell Biol. 47, 72- 82. 10.1016/j.ceb.2017.02.004 28399507 PMC5677836 · DOI
- Mettlen M., Chen P.-H., Srinivasan S., Danuser G. and Schmid S. L. (2018). Regulation of clathrin-mediated endocytosis. Annu. Rev. Biochem. 87, 871- 896. 10.1146/annurev-biochem-062917-012644 29661000 PMC6383209 · DOI · Paper page
- Mignogna M. L. and D'Adamo P. (2018). Critical importance of RAB proteins for synaptic function. Small GTPases 9, 145- 157. 10.1080/21541248.2016.1277001 28146371 PMC5902211 · DOI
- Parakh S., Perri E. R., Jagaraj C. J., Ragagnin A. M. G. and Atkin J. D. (2018). Rab-dependent cellular trafficking and amyotrophic lateral sclerosis. Crit. Rev. Biochem. Mol. Biol. 53, 623- 651. 10.1080/10409238.2018.1553926 30741580 · DOI
- Park S., Lee C., Sabharwal P., Zhang M., Meyers C. L. F. and Sockanathan S. (2013). GDE2 promotes neurogenesis by glycosylphosphatidylinositol-anchor cleavage of RECK. Science 339, 324- 328. 10.1126/science.1231921 23329048 PMC3644959 · DOI · Paper page
- Paulick M. G. and Bertozzi C. R. (2008). The glycosylphosphatidylinositol anchor: a complex membrane-anchoring structure for proteins. Biochemistry 47, 6991- 7000. 10.1021/bi8006324 18557633 PMC2663890 · DOI
- Rao M. and Sockanathan S. (2005). Transmembrane protein GDE2 induces motor neuron differentiation in vivo. Science 309, 2212- 2215. 10.1126/science.1117156 16195461 · DOI · Paper page
- Ratner N., Brodeur G. M., Dale R. C. and Schor N. F. (2016). The “neuro” of neuroblastoma: Neuroblastoma as a neurodevelopmental disorder. Ann. Neurol. 80, 13- 23. 10.1002/ana.24659 27043043 PMC5419586 · DOI
- Sanger A., Hirst J., Davies A. K. and Robinson M. S. (2019). Adaptor protein complexes and disease at a glance. J. Cell Sci. 132, jcs222992 10.1242/jcs.222992 31636158 · DOI
- Schreij A. M. A., Fon E. A. and McPherson P. S. (2016). Endocytic membrane trafficking and neurodegenerative disease. Cell. Mol. Life Sci. 73, 1529- 1545. 10.1007/s00018-015-2105-x 26721251 PMC11108351 · DOI
- Tan J. Z. A. and Gleeson P. A. (2019). The role of membrane trafficking in the processing of amyloid precursor protein and production of amyloid peptides in Alzheimer's disease. Biochim. Biophys. Acta Biomembr. 1861, 697- 712. 10.1016/j.bbamem.2018.11.013 30639513 · DOI
- van Veen M., Matas-Rico E., van de Wetering K., Leyton-Puig D., Kedziora K. M., De Lorenzi V., Stijf-Bultsma Y., van den Broek B., Jalink K., Sidenius N. et al. (2017). Negative regulation of urokinase receptor activity by a GPI-specific phospholipase C in breast cancer cells. eLife 6, e23649 10.7554/eLife.23649 28849762 PMC5576486 · DOI
- van Veen M., Mans L. A., Matas-Rico E., van Pelt J., Perrakis A., Moolenaar W. H. and Haramis A.-P. G. (2018). Glycerophosphodiesterase GDE2/GDPD5 affects pancreas differentiation in zebrafish. Int. J. Biochem. Cell Biol. 94, 71- 78. 10.1016/j.biocel.2017.11.015 29203233 · DOI
- Wandinger-Ness A. and Zerial M. (2014). Rab proteins and the compartmentalization of the endosomal system. Cold Spring Harb. Perspect. Biol. 6, a022616 10.1101/cshperspect.a022616 25341920 PMC4413231 · DOI · Paper page
- Xu W., Fang F., Ding J. and Wu C. (2018). Dysregulation of Rab5-mediated endocytic pathways in Alzheimer's disease. Traffic 19, 253- 262. 10.1111/tra.12547 29314494 PMC5869093 · DOI
- Yan Y., Wladyka C., Fujii J. and Sockanathan S. (2015). Prdx4 is a compartment-specific H2O2 sensor that regulates neurogenesis by controlling surface expression of GDE2. Nat. Commun. 6, 7006 10.1038/ncomms8006 25943695 PMC4432624 · DOI · Paper page
Cited by
Sorted by citations
GDE2-RECK controls ADAM10 α-secretase–mediated cleavage of amyloid precursor protein
Nakamura, M., Li, Y., Choi, B.-R., Matas-Rico, E., Troncoso, J., Takahashi, C., & Sockanathan, S. (2021) · Science Translational Medicine · doi:10.1126/scitranslmed.abe6178 · Cited by 38 · see citing works
Self-citationResearch on Hepatocyte Regulation of PCSK9-LDLR and Its Related Drug Targets
Liu, S.-S., Yu, T., Qiao, Y.-F., Gu, S.-X., & Chai, X.-L. (2024) · Chinese Journal of Integrative Medicine · doi:10.1007/s11655-023-3545-z · Cited by 11 · see citing works
- Authors
- Salgado-Polo, F., van Veen, M., van den Broek, B., Jalink, K., Leyton-Puig, D., Perrakis, A., Moolenaar, W. H., & Matas-Rico, E.
- Affiliations
- The Netherlands Cancer Institute (NL)
- The Netherlands Cancer Institute 2 Division of Cell Biology , , Plesmanlaan 121, 1066 CX Amsterdam , The Netherlands
- The Netherlands Cancer Institute 1 Division of Biochemistry, Oncode Institute , , Plesmanlaan 121, 1066 CX Amsterdam , The Netherlands
- Corresponding author
- Moolenaar, Wouter H.
- Matas-Rico, Elisa
- ORCID
- Venue
- Journal of Cell Science
- Publisher
- The Company of Biologists
- Published
- 2020-02-01
- Volume
- 133
- Issue
- 3
- ISSN
- 0021-9533 (ISSN-L)
- 1477-9137
- PMC
- PMC7033719
- OpenAlex
- W2999422078
- Cited by
- 13
- References
- 1
- Citations by year
- 2025: 1 · 2024: 4 · 2023: 1 · 2022: 2 · 2021: 2 · 2020: 3
- FWCI
- 1.00
- Type
- journal article
- Language
- en
- Open access
- hybrid
- doi.org
- Licence
- Locations
- Journal of Cell Science (publishedVersion, cc-by)
- bioRxiv (Cold Spring Harbor Laboratory) (acceptedVersion, cc-by-nc-nd)
- Europe PMC (PubMed Central) (publishedVersion, cc-by)
- PubMed Central (publishedVersion, cc-by)
- PubMed (publishedVersion)
- HighWire Press Open Archive (submittedVersion)
- Repositorio Institucional de la Universidad de Málaga (University of Málaga) (submittedVersion, cc-by)
- Funders
- KWF Kankerbestrijding (2017-10215)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cell Biology › Cellular transport and secretion
- Health Sciences › Medicine › Physiology › Lysosomal Storage Disorders Research
- Life Sciences › Neuroscience › Developmental Neuroscience › Neurogenesis and neuroplasticity mechanisms
- Keywords
- phospholipase D, GPI-anchored proteins, neuronal differentiation, protein trafficking, endocytosis, recycling pathway, C-terminal tail, neurodegeneration, neuroblastoma
- MeSH terms
- Animals, Cell Differentiation, Neuroblastoma, Phosphoric Diester Hydrolases, Phospholipases, Glycosylphosphatidylinositols, Mice
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review