The DOI matches its Crossref record; 64 of the 64 references it cites were found in a registry or an index.
Traces of Archaic Mitochondrial Lineages Persist in Austronesian-Speaking Formosan Populations
Open accessAbstract
Genetic affinities between aboriginal Taiwanese and populations from Oceania and Southeast Asia have previously been explored through analyses of mitochondrial DNA (mtDNA), Y chromosomal DNA, and human leukocyte antigen loci. Recent genetic studies have supported the "slow boat" and "entangled bank" models according to which the Polynesian migration can be seen as an expansion from Melanesia without any major direct genetic thread leading back to its initiation from Taiwan. We assessed mtDNA variation in 640 individuals from nine tribes of the central mountain ranges and east coast regions of Taiwan. In contrast to the Han populations, the tribes showed a low frequency of haplogroups D4 and G, and an absence of haplogroups A, C, Z, M9, and M10. Also, more than 85% of the maternal lineages were nested within haplogroups B4, B5a, F1a, F3b, E, and M7. Although indicating a common origin of the populations of insular Southeast Asia and Oceania, most mtDNA lineages in Taiwanese aboriginal populations are grouped separately from those found in China and the Taiwan general (Han) population, suggesting a prevalence in the Taiwanese aboriginal gene pool of its initial late Pleistocene settlers. Interestingly, from complete mtDNA sequencing information, most B4a lineages were associated with three coding region substitutions, defining a new subclade, B4a1a, that endorses the origin of Polynesian migration from Taiwan. Coalescence times of B4a1a were 13.2 +/- 3.8 thousand years (or 9.3 +/- 2.5 thousand years in Papuans and Polynesians). Considering the lack of a common specific Y chromosomal element shared by the Taiwanese aboriginals and Polynesians, the mtDNA evidence provided here is also consistent with the suggestion that the proto-Oceanic societies would have been mainly matrilocal.
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(1993) · Molecular Biology and Evolution · doi:10.1093/oxfordjournals.molbev.a040023 · Cited by 11,229
Sequence and organization of the human mitochondrial genome
Anderson, S., Bankier, A. T., Barrell, B. G., de Bruijn, M. H. L., Coulson, A. R., Drouin, J., Eperon, I. C., Nierlich, D. P., Roe, B. A., Sanger, F., et al. (1981) · Nature · doi:10.1038/290457a0 · Cited by 9,636
MEGA2: molecular evolutionary genetics analysis software
Kumar, S., Tamura, K., Jakobsen, I. B., & Nei, M. (2001) · Bioinformatics · doi:10.1093/bioinformatics/17.12.1244 · Cited by 6,097
Reanalysis and revision of the Cambridge reference sequence for human mitochondrial DNA
Andrews, R. M., Kubacka, I., Chinnery, P. F., Lightowlers, R. N., Turnbull, D. M., & Howell, N. (1999) · Nature Genetics · doi:10.1038/13779 · Cited by 3,337
ADE-4: a multivariate analysis and graphical display software
Thioulouse, J., Chessel, D., Dole´dec, S., & Olivier, J.-M. (1997) · Statistics and Computing · doi:10.1023/a:1018513530268 · Cited by 1,620
Mitochondrial genome variation and the origin of modern humans
Ingman, M., Kaessmann, H., Pääbo, S., & Gyllensten, U. (2000) · Nature · doi:10.1038/35047064 · Cited by 1,551
Farmers and Their Languages: The First Expansions
Diamond, J., & Bellwood, P. (2003) · Science · doi:10.1126/science.1078208 · Cited by 1,054
Natural selection shaped regional mtDNA variation in humans
Mishmar, D., Ruiz-Pesini, E., Golik, P., Macaulay, V., Clark, A. G., Hosseini, S., Brandon, M., Easley, K., Chen, E., Brown, M. D., et al. (2003) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0136972100 · Cited by 1,038
Phylogeographic Differentiation of Mitochondrial DNA in Han Chinese
Yao, Y.-G., Kong, Q.-P., Bandelt, H.-J., Kivisild, T., & Zhang, Y.-P. (2002) · The American Journal of Human Genetics · doi:10.1086/338999 · Cited by 536
Self-citationMitochondrial Genome Variation in Eastern Asia and the Peopling of Japan
Tanaka, M., Cabrera, V. M., González, A. M., Larruga, J. M., Takeyasu, T., Fuku, N., Guo, L.-J., Hirose, R., Fujita, Y., Kurata, M., et al. (2004) · Genome Research · doi:10.1101/gr.2286304 · Cited by 526
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Updated comprehensive phylogenetic tree of global human mitochondrial DNA variation
van Oven, M., & Kayser, M. (2009) · Human Mutation · doi:10.1002/humu.20921 · Cited by 1,810
Language Phylogenies Reveal Expansion Pulses and Pauses in Pacific Settlement
Gray, R. D., Drummond, A. J., & Greenhill, S. J. (2009) · Science · doi:10.1126/science.1166858 · Cited by 866
Kong, Q.-P., Bandelt, H.-J., Sun, C., Yao, Y.-G., Salas, A., Achilli, A., Wang, C.-Y., Zhong, L., Zhu, C.-L., Wu, S.-F., et al. (2006) · Human Molecular Genetics · doi:10.1093/hmg/ddl130 · Cited by 391
The genetic structure of Pacific Islanders
Friedlaender, J. S., Friedlaender, F. R., Reed, F. A., Kidd, K. K., Kidd, J. R., Chambers, G. K., Lea, R. A., Loo, J.-H., Koki, G., Hodgson, J. A., et al. (2008) · PLoS Genetics · doi:10.1371/journal.pgen.0040019 · Cited by 359
Self-citationAge of the Association between Helicobacter pylori and Man
Moodley, Y., Linz, B., Bond, R. P., Nieuwoudt, M., Soodyall, H., Schlebusch, C. M., Bernhöft, S., Hale, J., Suerbaum, S., Mugisha, L., et al. (2012) · PLoS Pathogens · doi:10.1371/journal.ppat.1002693 · Cited by 356
Metadata
- Authors
- Trejaut, J. A., Kivisild, T., Loo, J. H., Lee, C. L., He, C. L., Hsu, C. J., Li, Z. Y., & Lin, M.
- Venue
- PLoS Biology
- Publisher
- Public Library of Science (PLoS)
- Published
- 2005-07-05
- Volume
- 3
- Issue
- 8
- Pages
- e247
- ISSN
- 1544-9173 (ISSN-L)
- 1545-7885
- OpenAlex
- W2053902377
- Cited by
- 269
- References
- 64
- FWCI
- 8.74
- Type
- journal article
- Language
- en
- Open access
- gold
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- Trejaut, J. A., Kivisild, T., Loo, J. H., Lee, C. L., He, C. L., Hsu, C. J., Li, Z. Y., & Lin, M. (2005). Traces of Archaic Mitochondrial Lineages Persist in Austronesian-Speaking Formosan Populations. PLoS Biology. https://doi.org/10.1371/journal.pbio.0030247
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