Cited by 37Artificial Intelligence in Healthcare and EducationMachine Learning in HealthcareTopic Modeling

Clinical insights: A comprehensive review of language models in medicine

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Neveditsin, Nikita, Lingras, Pawan, Mago, Vijay·2025·PLOS Digital Health

Abstract

This paper explores the advancements and applications of language models in healthcare, focusing on their clinical use cases. It examines the evolution from early encoder-based systems requiring extensive fine-tuning to state-of-the-art large language and multimodal models capable of integrating text and visual data through in-context learning. The analysis emphasizes locally deployable models, which enhance data privacy and operational autonomy, and their applications in tasks such as text generation, classification, information extraction, and conversational systems. The paper also highlights a structured organization of tasks and a tiered ethical approach, providing a valuable resource for researchers and practitioners, while discussing key challenges related to ethics, evaluation, and implementation.

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  • Although there are many reviews on LLM explainability in general domains, on explainable AI in healthcare, or on LLM applications in medicine, there remain substantial gaps in understanding explainability for LLMs in healthcare.

    “Although there are many reviews on LLM explainability in general domains [18,19], on explainable AI in healthcare [33,34], or on LLM applications in medicine [35-37], we still have substantial gaps in our understanding of explainability for LLMs in healthcare.”

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  1. [1]Goldfarb A. Pause artificial intelligence research? Understanding AI policy challenges. Canadian J Econ/Revue canadienne d’économie. 2024; 57(2): 363– 77. doi: 10.1111/caje.12705 · DOI
  2. [2]Secinaro S, Calandra D, Secinaro A, Muthurangu V, Biancone P. The role of artificial intelligence in healthcare: a structured literature review. BMC Med Inform Decis Mak. 2021; 21(1): 125. doi: 10.1186/s12911-021-01488-9 33836752 PMC8035061 · DOI
  3. [5]Team G, Anil R, Borgeaud S, Alayrac JB, Yu J, Soricut R, et al. Gemini: a family of highly capable multimodal models; 2024. Available from: https://arxiv.org/abs/2312.11805 · arXiv
  4. [7]Luo X, Deng Z, Yang B, Luo MY. Pre-trained language models in medicine: a survey. Artif Intell Med. 2024; 154102904. doi: 10.1016/j.artmed.2024.102904 38917600 · DOI
  5. [9]Wang B, Xie Q, Pei J, Chen Z, Tiwari P, Li Z. Pre-trained language models in biomedical domain: a systematic survey. ACM Comput Surv. 2023; 56(3): 1– 52.
  6. [10]Thirunavukarasu AJ, Ting DSJ, Elangovan K, Gutierrez L, Tan TF, Ting DSW. Large language models in medicine. Nat Med. 2023; 29(8): 1930– 40. doi: 10.1038/s41591-023-02448-8 37460753 · DOI · Paper page
  7. [12]Russell SJ, Norvig P. Artificial intelligence: a modern approach. Pearson; 2016.
  8. [15]Roberts A, Raffel C, Shazeer N. How much knowledge can you pack into the parameters of a language model? In: Webber B, Cohn T, He Y, Liu Y, editors. Proceedings of the 2020 Conference on Empirical Methods in Natural Language Processing (EMNLP). Online: Association for Computational Linguistics; 2020. p. 5418– 26. Available from: https://aclanthology.org/2020.emnlp-main.437
  9. [17]Bahdanau D, Cho K, Bengio Y. Neural machine translation by jointly learning to align and translate. In: Bengio Y, LeCun Y, editors. 3rd International Conference on Learning Representations, ICLR 2015, San Diego, CA, USA, 2015 May 7-9, Conference Track Proceedings; 2015. Available from: http://arxiv.org/abs/1409.0473 · arXiv
  10. [18]Vaswani A, Shazeer N, Parmar N, Uszkoreit J, Jones L, Gomez A, et al. Attention is all you need. Adv Neural Inf Process Syst. 2017; 30: 5998– 6008. doi: 10.5555/3295222.3295349 · DOI
  11. [19]Radford A, Wu J, Child R, Luan D, Amodei D, Sutskever I. Language models are unsupervised multitask learners; 2019. Available from: https://api.semanticscholar.org/CorpusID:160025533
  12. [23]Liu Z, Huang Y, Yu X, Zhang L, Wu Z, Cao C, et al.. DeID-GPT: Zero-shot Medical Text De-Identification by GPT-4; 2023. Available from: http://arxiv.org/abs/2303.11032 · arXiv
  13. [24]Brown T, Mann B, Ryder N, Subbiah M, Kaplan J, Dhariwal P. Language models are few-shot learners. CoRR. 2020. https://arxiv.org/abs/2005.14165 · arXiv
  14. [25]Kenton JDMWC, Toutanova LK. Bert: pre-training of deep bidirectional transformers for language understanding. In: Proceedings of naacL-HLT. vol. 1; 2019. p. 2.
  15. [26]Wu J, Wu X, Qiu Z, Li M, Lin S, Zhang Y, et al. Large language models leverage external knowledge to extend clinical insight beyond language boundaries. J Am Med Inform Assoc: JAMIA. 2023:ocae079. PMC11339525 38684792
  16. [28]Team C. Chameleon: mixed-modal early-fusion foundation models; 2024. Available from: https://arxiv.org/abs/2405.09818 · arXiv
  17. [29]Grattafiori A, Dubey A, Jauhri A, Pandey A, Kadian A, Al-Dahle A, et al. The Llama 3 Herd of Models; 2024. Available from: https://arxiv.org/abs/2407.21783 · arXiv
  18. [31]Lan Z, Chen M, Goodman S, Gimpel K, Sharma P, Soricut R. ALBERT: a lite BERT for self-supervised learning of language representations; 2020. Available from: https://arxiv.org/abs/1909.11942 · arXiv
  19. [32]He P, Liu X, Gao J, Chen W. DeBERTa: dcoding-enhanced BERT with disentangled attention; 2021. Available from: https://arxiv.org/abs/2006.03654 · arXiv
  20. [34]Liu Y, Ott M, Goyal N, Du J, Joshi M, Chen D, et al.. RoBERTa: a robustly optimized BERT pretraining approach; 2019. Available from: https://arxiv.org/abs/1907.11692 · arXiv
  21. [36]Rothe S, Narayan S, Severyn A. Leveraging pre-trained checkpoints for sequence generation tasks. Trans Assoc Comput Linguist. 2020; 8: 264– 80. doi: 10.1162/tacl_a_00313 · DOI
  22. [41]Radford A, Kim JW, Hallacy C, Ramesh A, Goh G, Agarwal S, et al. Learning transferable visual models from natural language supervision; 2021. Available from: https://arxiv.org/abs/2103.00020 · arXiv
  23. [42]Liu F, Eisenschlos JM, Piccinno F, Krichene S, Pang C, Lee K, et al.. DePlot: one-shot visual language reasoning by plot-to-table translation; 2023. Available from: https://arxiv.org/abs/2212.10505 · arXiv
  24. [43]Kim G, Hong T, Yim M, Nam J, Park J, Yim J, et al.. OCR-free document understanding transformer; 2022. Available from: https://arxiv.org/abs/2111.15664 · arXiv
  25. [44]Huang Y, Lv T, Cui L, Lu Y, Wei F. LayoutLMv3: pre-training for document AI with unified text and image masking; 2022. Available from: https://arxiv.org/abs/2204.08387 · arXiv
  26. [45]Keskar NS, McCann B, Varshney LR, Xiong C, Socher R. CTRL: A Conditional Transformer Language Model for Controllable Generation. CoRR. 2019; https://arxiv.org/abs/1909.05858 · arXiv
  27. [46]Almazrouei E, Alobeidli H, Alshamsi A, Cappelli A, Cojocaru R, Debbah M, et al.. The falcon series of open language models; 2023. Available from: https://arxiv.org/abs/2311.16867 · arXiv
  28. [51]Guo M, Ainslie J, Uthus D, Ontanon S, Ni J, Sung YH, et al. LongT5: efficient text-to-text transformer for long sequences; 2022. Available from: https://arxiv.org/abs/2112.07916 · arXiv
  29. [54]Beyer L, Steiner A, Pinto AS, Kolesnikov A, Wang X, Salz D, et al. PaliGemma: a versatile 3B VLM for transfer; 2024. Available from: https://arxiv.org/abs/2407.07726 · arXiv
  30. [55]Black S, Biderman S, Hallahan E, Anthony Q, Gao L, Golding L, et al. GPT-NeoX-20B: An open-source autoregressive language model. In: Proceedings of the ACL Workshop on Challenges & Perspectives in Creating Large Language Models; 2022.Available from: https://arxiv.org/abs/2204.06745 · arXiv
  31. [56]Tay Y, Dehghani M, Tran VQ, Garcia X, Wei J, Wang X, et al. UL2: unifying language learning paradigms; 2023. Available from: https://arxiv.org/abs/2205.05131 · arXiv
  32. [59]Zhang S, Roller S, Goyal N, Artetxe M, Chen M, Chen S, et al. OPT: open pre-trained transformer language models; 2022. Available from: https://arxiv.org/abs/2205.01068 · arXiv
  33. [60]Workshop B, Team B. BLOOM: a 176B-parameter open-access multilingual language model; 2023. Available from: https://arxiv.org/abs/2211.05100 · arXiv
  34. [61]Chung H, Hou L, Longpre S, Zoph B, Tay Y, Fedus W. Scaling instruction-finetuned language models. J Mach Learn Res. 2024; 25(70): 1– 53.
  35. [63]Jacob B, Kligys S, Chen B, Zhu M, Tang M, Howard A, et al. Quantization and training of neural networks for efficient integer-arithmetic-only inference; 2017. Available from: https://arxiv.org/abs/1712.05877 · arXiv
  36. [64]Dettmers T, Pagnoni A, Holtzman A, Zettlemoyer L. QLoRA: efficient finetuning of quantized LLMs. In: Oh A, Naumann T, Globerson A, Saenko K, Hardt M, Levine S, editors. Advances in neural information processing systems. vol. 36. Curran Associates, Inc.; 2023. p. 10088– 115. Available from: https://proceedings.neurips.cc/paper_files/paper/2023/file/1feb87871436031bdc0f2beaa62a049b-Paper-Conference.pdf
  37. [65]Guo C, Zhang R, Xu J, Leng J, Liu Z, Huang Z, et al. GMLake: efficient and transparent GPU memory defragmentation for large-scale DNN training with virtual memory stitching. In: Proceedings of the 29th ACM International Conference on Architectural Support for Programming Languages and Operating Systems, Volume 2. ASPLOS ’24. New York, NY, USA: Association for Computing Machinery; 2024. p. 450– 66. Available from: doi: 10.1145/3620665.3640423 · DOI
  38. [67]Rajpurkar P, Zhang J, Lopyrev K, Liang P. Squad: 100,000+ questions for machine comprehension of text. arXiv preprint 2016. https://arxiv.org/abs/1606.05250 · arXiv
  39. [69]Wang A, Pruksachatkun Y, Nangia N, Singh A, Michael J, Hill F, et al. Superglue: a stickier benchmark for general-purpose language understanding systems. Adv Neural Inf Process Syst. 2019; 32.
  40. [70]Wang A. Glue: a multi-task benchmark and analysis platform for natural language understanding. arXiv preprint. 2018. https://arxiv.org/abs/1804.07461 · arXiv
  41. [75]Singh A, Natarajan V, Shah M, Jiang Y, Chen X, Batra D, et al. Towards VQA models that can read; 2019. Available from: https://arxiv.org/abs/1904.08920 · arXiv
  42. [76]Mathew M, Karatzas D, Jawahar CV. DocVQA: a dataset for VQA on document images; 2021. Available from: https://arxiv.org/abs/2007.00398 · arXiv
  43. [77]Masry A, Long DX, Tan JQ, Joty S, Hoque E. ChartQA: a benchmark for question answering about charts with visual and logical reasoning; 2022. Available from: https://arxiv.org/abs/2203.10244 · arXiv
  44. [78]Zhang X, Tian C, Yang X, Chen L, Li Z, Petzold L. AlpaCare: instruction-tuned large language models for medical application. 2023. doi: 10.48550/ARXIV.2310.14558 · DOI
  45. [79]Li Y, Li Z, Zhang K, Dan R, Jiang S, Zhang Y. ChatDoctor: a medical chat model fine-tuned on a large language model Meta-AI (LLaMA) using medical domain knowledge. 2023. PMC10364849 37492832
  46. [80]Abbasian M, Azimi I, Rahmani AM, Jain R. Conversational health agents: a personalized LLM-powered agent framework; 2023. Available from: http://arxiv.org/abs/2310.02374 40039006 · arXiv
  47. [81]Toma A, Lawler PR, Ba J, Krishnan RG, Rubin BB, Wang B. Clinical camel: an open expert-level medical language model with dialogue-based knowledge encoding. 2023. doi: 10.48550/ARXIV.2305.12031 · DOI · Paper page
  48. [83]Johnson A, Pollard T, Shen L, Lehman LW, Feng M, Ghassemi M, et al. MIMIC-III, a freely accessible critical care database; 2016. Available from: https://paperswithcode.com/dataset/mimic-iii PMC4878278 27219127
  49. [84]Lee J, Yoon W, Kim S, Kim D, Kim S, So CH, et al. BioBERT: a pre-trained biomedical language representation model for biomedical text mining. Bioinformatics. 2020; 36(4): 1234– 40. doi: 10.1093/bioinformatics/btz682 31501885 PMC7703786 · DOI · Paper page
  50. [85]Chakraborty S, Bisong E, Bhatt S, Wagner T, Elliott R, Mosconi F. BioMedBERT: a pre-trained biomedical language model for QA and IR. In: Scott D, Bel N, Zong C, editors. Proceedings of the 28th International Conference on Computational Linguistics. Barcelona, Spain (Online): International Committee on Computational Linguistics; 2020. p. 669– 79. Available from: https://aclanthology.org/2020.coling-main.59
  51. [86]Gu Y, Tinn R, Cheng H, Lucas M, Usuyama N, Liu X. Domain-specific language model pretraining for biomedical natural language processing. ACM Trans Comput Healthc. 2021; 3(1): 1– 23. doi: 10.1145/3458754 · DOI · Paper page
  52. [88]Yang X, Chen A, PourNejatian N, Shin HC, Smith KE, Parisien C, et al. GatorTron: a large clinical language model to unlock patient information from unstructured electronic health records; 2022. Available from: http://arxiv.org/abs/2203.03540 · arXiv
  53. [89]Luo R, Sun L, Xia Y, Qin T, Zhang S, Poon H, et al. BioGPT: generative pre-trained transformer for biomedical text generation and mining. Brief Bioinform. 2022; 23(6):bbac409. doi: 10.1093/bib/bbac409 36156661 · DOI · Paper page
  54. [91]Chen Z, Varma M, Delbrouck JB, Paschali M, Blankemeier L, Veen DV, et al. CheXagent: towards a foundation model for chest X-Ray interpretation; 2024. Available from: https://arxiv.org/abs/2401.12208 · arXiv
  55. [92]Dogan RI, Leaman R, Lu Z. NCBI disease corpus: a resource for disease name recognition and concept normalization. J Biomed Inform. 2014; 47: 1– 10. doi: 10.1016/j.jbi.2013.12.006 24393765 PMC3951655 · DOI
  56. [93]Uzuner Ö, South BR, Shen S, DuVall SL. 2010 i2b2/VA challenge on concepts, assertions, and relations in clinical text. J Am Med Inform Assoc. 2011; 18(5): 552– 6. doi: 10.1136/amiajnl-2011-000203 21685143 PMC3168320 · DOI
  57. [94]Li J, Sun Y, Johnson RJ, Sciaky D, Wei CH, Leaman R. BioCreative V CDR task corpus: a resource for chemical disease relation extraction. Database. 2016;2016. PMC4860626 27161011
  58. [95]Krallinger M, Leitner F, Rabal O, Vazquez M, Oyarzabal J, Valencia A. CHEMDNER: the drugs and chemical names extraction challenge. J Cheminform. 2015; 7(Suppl 1 Text mining for chemistry and the CHEMDNER track):S1. doi: 10.1186/1758-2946-7-S1-S1 25810766 PMC4331685 · DOI
  59. [96]Smith L, Tanabe L, Ando Rj, Kuo C, Chung I, Hsu C, et al. Overview of BioCreative II gene mention recognition. Genome Biology. 2008; 9(1): 1– 19. PMC2559986 18834493
  60. [97]Huang M, Lai P, Tsai R, Hsu W. Revised JNLPBA corpus: a revised version of biomedical NER corpus for relation extraction task. arXiv preprint. 2019. https://arxiv.org/abs/1901.10219 · arXiv
  61. [98]Gerner M, Nenadic G, Bergman CM. LINNAEUS: a species name identification system for biomedical literature. BMC Bioinformatics. 2010; 11: 85. doi: 10.1186/1471-2105-11-85 20149233 PMC2836304 · DOI
  62. [99]Pafilis E, Frankild SP, Fanini L, Faulwetter S, Pavloudi C, Vasileiadou A, et al. The SPECIES and ORGANISMS resources for fast and accurate identification of taxonomic names in text. PLoS One. 2013; 8(6):e65390. doi: 10.1371/journal.pone.0065390 23823062 PMC3688812 · DOI · Paper page
  63. [100]Bravo A, Pinero J, Queralt-Rosinach N, Rautschka M, Furlong LI. Extraction of relations between genes and diseases from text and large-scale data analysis: implications for translational research. BMC Bioinformatics. 2015; 1655. doi: 10.1186/s12859-015-0472-9 25886734 PMC4466840 · DOI
  64. [101]Coloma PM, Schuemie MJ, Trifirò G, Gini R, Herings R, Hippisley-Cox J, et al. Combining electronic healthcare databases in Europe to allow for large-scale drug safety monitoring: the EU-ADR Project. Pharmacoepidemiol Drug Saf. 2011; 20(1): 1– 11. doi: 10.1002/pds.2053 21182150 · DOI
  65. [102]Kringelum J, Kjaerulff SK, Brunak S, Lund O, Oprea TI, Taboureau O. ChemProt-3.0: a global chemical biology diseases mapping. Database (Oxford). 2016; 2016:bav123. doi: 10.1093/database/bav123 26876982 PMC4752971 · DOI
  66. [103]Tsatsaronis G, Balikas G, Malakasiotis P, Partalas I, Zschunke M, Alvers MR, et al. An overview of the BIOASQ large-scale biomedical semantic indexing and question answering competition. BMC Bioinformatics. 2015; 16: 138. doi: 10.1186/s12859-015-0564-6 25925131 PMC4450488 · DOI · Paper page
  67. [104]Nye B, Jessy Li J, Patel R, Yang Y, Marshall IJ, Nenkova A, et al. A corpus with multi-level annotations of patients, interventions and outcomes to support language processing for medical literature. Proc Conf Assoc Comput Linguist Meet. 2018; 2018: 197– 207. 30305770 PMC6174533
  68. [105]Herrero-Zazo M, Segura-Bedmar I, Martinez P, Declerck T. The DDI corpus: an annotated corpus with pharmacological substances and drug-drug interactions. J Biomed Inform. 2013; 46(5): 914– 20. doi: 10.1016/j.jbi.2013.07.011 23906817 · DOI
  69. [106]Sogancioglu G, Öztürk H, Özgür A. BIOSSES: a semantic sentence similarity estimation system for the biomedical domain. Bioinformatics. 2017; 33(14):i49– 58. doi: 10.1093/bioinformatics/btx238 28881973 PMC5870675 · DOI
  70. [107]Hanahan D, Weinberg RA. The hallmarks of cancer. Cell. 2000; 100(1): 57– 70. doi: 10.1016/s0092-8674(00)81683-9 10647931 · DOI · Paper page
  71. [108]Jin Q, Dhingra B, Liu Z, Cohen W, Lu X. Pubmedqa: a dataset for biomedical research question answering. arXiv preprint. 2019. https://arxiv.org/abs/1909.06146 · arXiv
  72. [109]Herrett E, Gallagher AM, Bhaskaran K, Forbes H, Mathur R, van Staa T, et al. Data resource profile: clinical practice research datalink (CPRD). Int J Epidemiol. 2015; 44(3): 827– 36. doi: 10.1093/ije/dyv098 PMC4521131 26050254 · DOI · Paper page
  73. [111]Henry S, Buchan K, Filannino M, Stubbs A, Uzuner O. 2018 n2c2 shared task on adverse drug events and medication extraction in electronic health records. J Am Med Inform Assoc. 2020; 27(1): 3– 12. doi: 10.1093/jamia/ocz166 31584655 PMC7489085 · DOI
  74. [112]Romanov A, Shivade C. Lessons from natural language inference in the clinical domain. arXiv preprint. 2018. https://arxiv.org/abs/1808.06752 · arXiv
  75. [113]Pampari A, Raghavan P, Liang J, Peng J. emrqa: a large corpus for question answering on electronic medical records. arXiv preprint 2018. https://arxiv.org/abs/1809.00732 · arXiv
  76. [114]Hou Y, Xia Y, Wu L, Xie S, Fan Y, Zhu J, et al. Discovering drug-target interaction knowledge from biomedical literature. Bioinformatics. 2022; 38(22): 5100– 7. doi: 10.1093/bioinformatics/btac648 36205562 · DOI
  77. [115]Lu Q, Dou D, Nguyen T. ClinicalT5: A Generative Language Model for Clinical Text. In: Findings of the Association for Computational Linguistics: EMNLP 2022. Abu Dhabi, United Arab Emirates: Association for Computational Linguistics; 2022. p. 5436– 5443. Available from: https://aclanthology.org/2022.findings-emnlp.398
  78. [116]Tran H, Yang Z, Yao Z, Yu H. BioInstruct: instruction tuning of large language models for biomedical natural language processing. J Am Med Inform Assoc. 2024; 31(9): 1821– 32. doi: 10.1093/jamia/ocae122 38833265 PMC11339494 · DOI
  79. [117]Jin D, Pan E, Oufattole N, Weng W, Fang H, Szolovits P. What disease does this patient have? a large-scale open domain question answering dataset from medical exams. Appl Sci. 2021; 11(14): 6421.
  80. [118]Pal A, Umapathi LK, Sankarasubbu M. Medmcqa: a large-scale multi-subject multi-choice dataset for medical domain question answering. Conference on Health, Inference, and Learning. PMLR; 2022. p. 248– 60.
  81. [121]Hendrycks D, Burns C, Basart S, Zou A, Mazeika M, Song D, et al.. Measuring massive multitask language understanding; 2021. Available from: https://arxiv.org/abs/2009.03300 · arXiv
  82. [123]Han T, Adams LC, Papaioannou JM, Grundmann P, Oberhauser T, Loser A, et al. MedAlpaca -an open-source collection of medical conversational AI models and training data. 2023. https://arxiv.org/abs/2304.08247 · arXiv
  83. [124]Wu C, Lin W, Zhang X, Zhang Y, Wang Y, Xie W. PMC-LLaMA: towards building open-source language models for medicine. 2023. https://arxiv.org/abs/2304.14454 PMC11639126 38613821 · arXiv
  84. [126]Zhang S, Xu Y, Usuyama N, Xu H, Bagga J, Tinn R, et al.. BiomedCLIP: a multimodal biomedical foundation model pretrained from fifteen million scientific image-text pairs; 2024. Available from: https://arxiv.org/abs/2303.00915 · arXiv
  85. [129]Johnson AEW, Pollard TJ, Greenbaum NR, Lungren MP, ying Deng C, Peng Y, et al.. MIMIC-CXR-JPG, a large publicly available database of labeled chest radiographs; 2019. Available from: https://arxiv.org/abs/1901.07042 PMC6908718 31831740 · arXiv
  86. [130]Bustos A, Pertusa A, Salinas J-M, de la Iglesia-Vayá M. PadChest: A large chest x-ray image dataset with multi-label annotated reports. Med Image Anal. 2020; 66: 101797. doi: 10.1016/j.media.2020.101797 32877839 · DOI · Paper page
  87. [131]Vayá M, Saborit J, Montell J, Pertusa A, Bustos A, Cazorla M. BIMCV COVID-19: a large annotated dataset of RX and CT images from COVID-19 patients. arXiv preprint. 2020. https://arxiv.org/abs/2006.01174 · arXiv
  88. [135]Demner-Fushman D, Antani S, Simpson M, Thoma G. Design and development of a multimodal biomedical information retrieval system. J Comput Sci Eng. 2012; 6(2): 168– 77.
  89. [136]Wang Z, Liu L, Wang L, Zhou L. R2GenGPT: Radiology report generation with frozen LLMs. Meta-Radiology. 2023; 1(3): 100033. doi: 10.1016/j.metrad.2023.100033 · DOI
  90. [139]Eppler MB, Ganjavi C, Knudsen JE, Davis RJ, Ayo-Ajibola O, Desai A, et al. Bridging the gap between urological research and patient understanding: the role of large language models in automated generation of layperson’s summaries. Urol Pract. 2023; 10(5): 436– 43. doi: 10.1097/UPJ.0000000000000428 37410015 · DOI
  91. [140]Nair V, Schumacher E, Kannan A. Generating medically-accurate summaries of patient-provider dialogue: a multi-stage approach using large language models. In: Proceedings of the 5th Clinical Natural Language Processing Workshop. 2023. p. 200– 17.
  92. [141]Phatak A, Mago VK, Agrawal A, Inbasekaran A, Giabbanelli PJ. Narrating causal graphs with large language models; 2024. Available from: https://arxiv.org/abs/2403.07118 · arXiv
  93. [142]Tang Y, Yang H, Zhang L, Yuan Y. Work like a doctor: Unifying scan localizer and dynamic generator for automated computed tomography report generation. Exp Syst Appl. 2024; 237: 121442. doi: 10.1016/j.eswa.2023.121442 · DOI
  94. [143]Demner-Fushman D, Kohli MD, Rosenman MB, Shooshan SE, Rodriguez L, Antani S, et al. Preparing a collection of radiology examinations for distribution and retrieval. J Am Med Inform Assoc. 2016; 23(2): 304– 10. doi: 10.1093/jamia/ocv080 26133894 PMC5009925 · DOI · Paper page
  95. [144]Johnson A, Pollard T, Mark R, Berkowitz S, Horng S. MIMIC-CXR Database (version 2.0.0); 2019. Available from: https://physionet.org/content/mimic-cxr/2.0.0/ PMC6908718 31831740
  96. [145]Irvin J, Rajpurkar P, Ko M, Yu Y, Ciurea-Ilcus S, Chute C, et al.. CheXpert: a large chest radiograph dataset with uncertainty labels and expert comparison; 2019. Available from: https://arxiv.org/abs/1901.07031 · arXiv
  97. [146]Yang Z, Xu X, Yao B, Rogers E, Zhang S, Intille S, et al. Talk2Care: an LLM-based voice assistant for communication between healthcare providers and older adults. Proc ACM Interact Mob Wearable Ubiquit Technol. 2024; 8(2). doi: 10.1145/3659625 · DOI · Paper page
  98. [147]Kugic A, Kreuzthaler M, Schulz S. Clinical acronym disambiguation via ChatGPT and BING. In: Giacomini M, Stoicu-Tivadar L, Balestra G, Benis A, Bonacina S, Bottrighi A, et al., editors. Studies in health technology and informatics. IOS Press; 2023. Available from: https://ebooks.iospress.nl/doi/10.3233/SHTI230743 37869810 · DOI
  99. [148]Liu Y, Melton GB, Zhang R. Exploring large language models for acronym, symbol sense disambiguation, and semantic similarity and relatedness assessment. AMIA Jt Summits Transl Sci Proc. 2024; 2024: 324– 33. 38827102 PMC11141821
  100. [149]Toddenroth D. Classifiers of medical eponymy in scientific texts. In: Hagglund M, Blusi M, Bonacina S, Nilsson L, Cort Madsen I, Pelayo S, et al., editors. Studies in health technology and informatics. IOS Press; 2023.Available from: https://ebooks.iospress.nl/doi/10.3233/SHTI230271 37203500 · DOI
  101. [150]Moon S, Pakhomov S, Liu N, Ryan JO, Melton GB. A sense inventory for clinical abbreviations and acronyms created using clinical notes and medical dictionary resources. J Am Med Inform Assoc. 2014; 21(2): 299– 307. doi: 10.1136/amiajnl-2012-001506 23813539 PMC3932450 · DOI
  102. [151]Weeber M, Mork JG, Aronson AR. Developing a test collection for biomedical word sense disambiguation. In: Proceedings of the AMIA Symposium. American Medical Informatics Association; 2001. p. 746 PMC2243574 11825285
  103. [152]Wagh A, Khanna M. Clinical abbreviation disambiguation using clinical variants of BERT. In: Morusupalli R, Dandibhotla TS, Atluri VV, Windridge D, Lingras P, Komati VR, editors. Multi-disciplinary trends in artificial intelligence. Cham: Springer; 2023. p. 214– 24
  104. [153]Groza T, Caufield H, Gration D, Baynam G, Haendel MA, Robinson PN, et al. An evaluation of GPT models for phenotype concept recognition. arXiv preprint 2023. https://arxiv.org/abs/2309.17169 PMC10829255 38297371 · arXiv
  105. [154]Lopez-Garcia G, Jerez JM, Ribelles N, Alba E, Veredas FJ. Explainable clinical coding with in-domain adapted transformers. J Biomed Inform. 2023; 139: 104323. doi: 10.1016/j.jbi.2023.104323 36813154 · DOI
  106. [156]Ben Shoham O, Rappoport N. CPLLM: Clinical prediction with large language models. PLOS Digit Health. 2024; 3(12):e0000680. doi: 10.1371/journal.pdig.0000680 39642102 PMC11623460 · DOI
  107. [157]Dus Y, Nefedov G. An automated tool to detect suicidal susceptibility from social media posts; 2023. Available from: http://arxiv.org/abs/2310.06056 · arXiv
  108. [158]Fisher A, Young MM, Payer D, Pacheco K, Dubeau C, Mago V. Automating detection of drug-related harms on social media: machine learning framework. J Med Internet Res. 2023; 25:e43630. doi: 10.2196/43630 37725410 PMC10548323 · DOI
  109. [160]Gaur M, Alambo A, Sain JP, Kursuncu U, Thirunarayan K, Kavuluru R, et al. Knowledge-aware assessment of severity of suicide risk for early intervention. In: The World Wide Web Conference. WWW ’19. New York, NY, USA: Association for Computing Machinery; 2019. p. 514– 25. Available from: doi: 10.1145/3308558.3313698 · DOI
  110. [162]Pollard TJ, Johnson AEW, Raffa JD, Celi LA, Mark RG, Badawi O. The eICU collaborative research database, a freely available multi-center database for critical care research. Sci Data. 2018; 5: 180178. doi: 10.1038/sdata.2018.178 30204154 PMC6132188 · DOI · Paper page
  111. [163]Groza T, Kohler S, Doelken S, Collier N, Oellrich A, Smedley D, et al. Automatic concept recognition using the human phenotype ontology reference and test suite corpora. Database (Oxford). 2015; 2015:bav005. doi: 10.1093/database/bav005 25725061 PMC4343077 · DOI
  112. [164]Weissenbacher D, Rawal S, Zhao X, Priestley JRC, Szigety KM, Schmidt SF, et al. PhenoID, a language model normalizer of physical examinations from genetics clinical notes. medRxiv. 2024: 2023.10.16.23296894. doi: 10.1101/2023.10.16.23296894 37904943 PMC10614999 · DOI
  113. [165]Garg M, Saxena C, Saha S, Krishnan V, Joshi R, Mago V. CAMS: an annotated corpus for causal analysis of mental health issues in social media posts. In: Proceedings of the Thirteenth Language Resources and Evaluation Conference. Marseille, France: European Language Resources Association; 2022. p. 6387– 96. Available from: https://aclanthology.org/2022.lrec-1.686
  114. [166]Liyanage C, Garg M, Mago V, Sohn S. Augmenting reddit posts to determine wellness dimensions impacting mental health. In: Demner-fushman D, Ananiadou S, Cohen K, editors. The 22nd Workshop on Biomedical Natural Language Processing and BioNLP Shared Tasks. Toronto, Canada: Association for Computational Linguistics; 2023. p. 306– 12. Available from: https://aclanthology.org/2023.bionlp-1.27 PMC10878427 38384674
  115. [167]Garg M, Shahbandegan A, Chadha A, Mago V. An annotated dataset for explainable interpersonal risk factors of mental disturbance in social media posts. In: Rogers A, Boyd-Graber J, Okazaki N, editors. Findings of the Association for Computational Linguistics: ACL 2023. Toronto, Canada: Association for Computational Linguistics; 2023. p. 11960– 9. Available from: https://aclanthology.org/2023.findings-acl.757
  116. [168]Xie K, Gallagher RS, Shinohara RT, Xie SX, Hill CE, Conrad EC, et al. Long-term epilepsy outcome dynamics revealed by natural language processing of clinic notes. Epilepsia. 2023; 64(7): 1900– 9. doi: 10.1111/epi.17633 37114472 PMC10523917 · DOI
  117. [170]Bhagat N, Mackey O, Wilcox A. Large language models for efficient medical information extraction. AMIA Jt Summits Transl Sci Proc. 2024; 2024: 509– 14. 38827084 PMC11141860
  118. [171]Cao M, Wang H, Liu X, Wu J, Zhao M. LLM collaboration PLM improves critical information extraction tasks in medical articles. In: China Health Information Processing Conference. Springer; 2023. p. 178– 85.
  119. [172]Soni S, Datta S, Roberts K. quEHRy: a question answering system to query electronic health records. J Am Med Inform Assoc. 2023; 30(6): 1091– 102. doi: 10.1093/jamia/ocad050 37087111 PMC10198534 · DOI
  120. [173]Landman R, Healey SP, Loprinzo V, Kochendoerfer U, Winnier AR, Henstock PV, et al. Using large language models for safety-related table summarization in clinical study reports. JAMIA Open. 2024; 7(2):ooae043. doi: 10.1093/jamiaopen/ooae043 38818116 PMC11137320 · DOI
  121. [174]Mishra N, Sahu G, Calixto I, Abu-Hanna A, Laradji I. LLM aided semi-supervision for efficient extractive dialog summarization. In: Bouamor H, Pino J, Bali K, editors. Findings of the Association for Computational Linguistics: EMNLP 2023. Singapore: Association for Computational Linguistics; 2023. p. 10002– 9. Available from: https://aclanthology.org/2023.findings-emnlp.670
  122. [175]Devaraj A, Marshall I, Wallace B, Li JJ. Paragraph-level simplification of medical texts. In: Toutanova K, Rumshisky A, Zettlemoyer L, Hakkani-Tur D, Beltagy I, Bethard S, et al., editors. Proceedings of the 2021 Conference of the North American Chapter of the Association for Computational Linguistics: Human Language Technologies. Online: Association for Computational Linguistics; 2021. p. 4972– 84. Available from: https://aclanthology.org/2021.naacl-main.395 PMC9161242 35663507
  123. [176]Artsi Y, Sorin V, Konen E, Glicksberg BS, Nadkarni G, Klang E. Large language models in simplifying radiological reports: systematic review. medRxiv. 2024. doi: 10.1101/2024.01.05.24300884 · DOI
  124. [178]Swanson K, He S, Calvano J, Chen D, Telvizian T, Jiang L, et al. Biomedical text readability after hypernym substitution with fine-tuned large language models. PLOS Digit Health. 2024; 3(4):e0000489. doi: 10.1371/journal.pdig.0000489 38625843 PMC11020904 · DOI
  125. [179]Wiest I, Leβmann M, Wolf F, Ferber D, Van Treeck M, Zhu J. Anonymizing medical documents with local, privacy preserving large language models: The LLM-Anonymizer. medRxiv. 2024. doi: 10.1101/2024.06.11.24308355 · DOI
  126. [180]Guo Y, Qiu W, Leroy G, Wang S, Cohen T. Retrieval augmentation of large language models for lay language generation. J Biomed Inform. 2024; 149: 104580. doi: 10.1016/j.jbi.2023.104580 38163514 PMC10874606 · DOI
  127. [181]Joseph S, Kazanas K, Reina K, Ramanathan VJ, Xu W, Wallace BC, et al. Multilingual simplification of medical texts; 2023. Available from: https://arxiv.org/abs/2305.12532 · arXiv
  128. [182]Saha T, Gakhreja V, Das AS, Chakraborty S, Saha S. Towards motivational and empathetic response generation in online mental health support. In: Proceedings of the 45th International ACM SIGIR Conference on Research and Development in Information Retrieval. Madrid Spain: ACM; 2022. p. 2650– 6. Available from: https://dl.acm.org/doi/10.1145/3477495.3531912 · DOI
  129. [184]Kang C, Cheng Y, Urbanovad K, Hu L, Zhang Y, Hu Y, et al. Domain-Specific Assistant-Instruction on Psychotherapy Chatbot. SSRN; 2023. Available from: https://www.ssrn.com/abstract=4616282
  130. [185]Cung M, Sosa B, Yang HS, McDonald MM, Matthews BG, Vlug AG, et al. The performance of artificial intelligence chatbot large language models to address skeletal biology and bone health queries. J Bone Miner Res. 2024; 39(2): 106– 15. doi: 10.1093/jbmr/zjad007 38477743 PMC11184616 · DOI
  131. [187]Levine DM, Tuwani R, Kompa B, Varma A, Finlayson SG, Mehrotra A, et al. The diagnostic and triage accuracy of the GPT-3 Artificial Intelligence Model. medRxiv. 2023;2023.01.30.23285067. doi: 10.1101/2023.01.30.23285067 39059888 · DOI · Paper page
  132. [188]Kim S, Schramm S, Berberich C, Rosenkranz E, Schmitzer L, Serguen K. Human-AI collaboration in large language model-assisted brain MRI differential diagnosis: a usability study. medRxiv. 2024; 2024– 02. PMC12350562 40055233
  133. [189]Saha T, Chopra S, Saha S, Bhattacharyya P, Kumar P. A large-scale dataset for motivational dialogue system: an application of natural language generation to mental health. 2021 International Joint Conference on Neural Networks (IJCNN). 2021. p. 1– 8.
  134. [190]Pirina I, Coltekin C. Identifying depression on Reddit: the effect of training data. Proceedings of the 2018 EMNLP Workshop SMM4H: The 3rd Social Media Mining for Health Applications Workshop & Shared Task. 2018. p. 9– 12.
  135. [191]Zirikly A, Resnik P, Uzuner O, Hollingshead K. CLPsych 2019 Shared task: predicting the degree of suicide risk in reddit posts. In: Niederhoffer K, Hollingshead K, Resnik P, Resnik R, Loveys K, editors. Proceedings of the Sixth Workshop on Computational Linguistics and Clinical Psychology. Minneapolis, Minnesota: Association for Computational Linguistics; 2019. p. 24– 33. Available from: https://aclanthology.org/W19- 3003
  136. [192]Turcan E, McKeown K. Dreaddit: A Reddit dataset for stress analysis in social media. In: Holderness E, Jimeno Yepes A, Lavelli A, Minard AL, Pustejovsky J, Rinaldi F, editors. Proceedings of the Tenth International Workshop on Health Text Mining and Information Analysis (LOUHI 2019). Hong Kong: Association for Computational Linguistics; 2019. p. 97– 107. Available from: https://aclanthology.org/D19-6213
  137. [193]Zhou S, Ding S, Wang J, Lin M, Melton G, Zhang R. Interpretable differential diagnosis with dual-inference large language models. arXiv preprint. 2024. https://arxiv.org/abs/2407.07330 PMC12021655 40291514 · arXiv
  138. [194]Singh A, RG E, et al. RAG-based medical assistant especially for infectious diseases. In: 2024 International Conference on Inventive Computation Technologies (ICICT). 2024. p. 1128– 33.
  139. [195]Jeong M, Sohn J, Sung M, Kang J. Improving medical reasoning through retrieval and self-reflection with retrieval-augmented large language models. Bioinformatics. 2024;40(Suppl 1):i119-29. doi: 10.1093/bioinformatics/btae238 38940167 PMC11211826 · DOI · Paper page
  140. [196]Brake N, Schaaf T. Comparing two model designs for clinical note generation; is an LLM a useful evaluator of consistency? 2024. Available from: https://arxiv.org/abs/2404.06503 · arXiv
  141. [197]Phang J, Zhao Y, Liu PJ. Investigating efficiently extending transformers for long input summarization. In: Proceedings of the 2023 Conference on Empirical Methods in Natural Language Processing; 2023. p. 3946– 61
  142. [199]Glover J, Fancellu F, Jagannathan V, Gormley MR, Schaaf T. Revisiting text decomposition methods for NLI-based factuality scoring of summaries. In: Bosselut A, Chandu K, Dhole K, Gangal V, Gehrmann S, Jernite Y, et al., editors. Proceedings of the 2nd Workshop on Natural Language Generation, Evaluation, and Metrics (GEM). Abu Dhabi, United Arab Emirates (Hybrid): Association for Computational Linguistics; 2022. p. 97– 105. Available from: https://aclanthology.org/2022.gem-1.7
  143. [203]Ali SR, Dobbs TD, Hutchings HA, Whitaker IS. Using ChatGPT to write patient clinic letters. Lancet Digit Health. 2023; 5(4):e179– 81. doi: 10.1016/S2589-7500(23)00048-1 36894409 · DOI · Paper page
  144. [204]Parry D, Odedra A, Fagbohun M, Oeppen RS, Davidson M, Brennan PA. Abbreviation use decreases effective clinical communication and can compromise patient safety. Br J Oral Maxillofac Surg. 2023; 61(8): 509– 13. doi: 10.1016/j.bjoms.2023.07.004 37563053 · DOI
  145. [205]Sivarajkumar S, Kelley M, Samolyk-Mazzanti A, Visweswaran S, Wang Y. An empirical evaluation of prompting strategies for large language models in zero-shot clinical natural language processing. arXiv preprint 2023. https://arxiv.org/abs/2309.08008 PMC11036183 38587879 · arXiv
  146. [208]Levkovich I, Elyoseph Z. Suicide risk assessments through the eyes of ChatGPT-3.5 versus ChatGPT-4: vignette study. JMIR Ment Health. 2023; 10:e51232. doi: 10.2196/51232 37728984 PMC10551796 · DOI
  147. [210]Shankar V, Yousefi E, Manashty A, Blair D, Teegapuram D. Clinical-GAN: trajectory forecasting of clinical events using transformer and generative adversarial networks. Artif Intell Med. 2023; 138: 102507. doi: 10.1016/j.artmed.2023.102507 36990584 · DOI
  148. [211]Kadri F, Dairi A, Harrou F, Sun Y. Towards accurate prediction of patient length of stay at emergency department: a GAN-driven deep learning framework. J Ambient Intell Humaniz Comput. 2022; 14(9): 11481– 11495. doi: 10.1007/s12652-022-03717-z 35132336 PMC8810344 · DOI
  149. [212]Henriksson A, Pawar Y, Hedberg P, Nauclér P. Multimodal fine-tuning of clinical language models for predicting COVID-19 outcomes. Artif Intell Med. 2023; 146: 102695. doi: 10.1016/j.artmed.2023.102695 38042595 · DOI
  150. [214]Agrawal M, Hegselmann S, Lang H, Kim Y, Sontag D. Large language models are few-shot clinical information extractors. In: Proceedings of the 2022 Conference on Empirical Methods in Natural Language Processing. Abu Dhabi, United Arab Emirates: Association for Computational Linguistics; 2022. p. 1998– 2022. Available from: https://aclanthology.org/2022.emnlp-main.130
  151. [215]Ge J, Li M, Delk MB, Lai JC. A comparison of a large language model vs manual chart review for the extraction of data elements from the electronic health record. Gastroenterology. 2024; 166(4): 707– 709.e3. doi: 10.1053/j.gastro.2023.12.019 38151192 PMC11792087 · DOI
  152. [217]Collaboration C. Cochrane database of systematic reviews; 2024. Available from: https://www.cochranelibrary.com/cdsr/about-cdsr
  153. [218]Phan LN, Anibal JT, Tran H, Chanana S, Bahadroglu E, Peltekian A, et al. SciFive: a text-to-text transformer model for biomedical literature; 2021. Available from: https://arxiv.org/abs/2106.03598 · arXiv
  154. [220]Birkun AA, Gautam A. Large Language Model (LLM)-powered chatbots fail to generate guideline-consistent content on resuscitation and may provide potentially harmful advice. Prehosp Disaster Med. 2023; 38(6): 757– 63. doi: 10.1017/S1049023X23006568 37927093 · DOI
  155. [221]Zhang T, Kishore V, Wu F, Weinberger KQ, Artzi Y. BERTScore: evaluating text generation with BERT; 2020. Available from: https://arxiv.org/abs/1904.09675 · arXiv
  156. [222]Schwartz IS, Link KE, Daneshjou R, Cortes-Penfield N. Black box warning: large language models and the future of infectious diseases consultation. Clin Infect Dis. 2024; 78(4): 860– 6. doi: 10.1093/cid/ciad633 37971399 PMC11006107 · DOI · Paper page
  157. [224]Yuan W, Neubig G, Liu P. BARTScore: evaluating generated text as text generation; 2021. Available from: https://arxiv.org/abs/2106.11520 · arXiv
  158. [225]Sharma A, Rushton K, Lin I, Wadden D, Lucas K, Miner A, et al. Cognitive reframing of negative thoughts through human-language model interaction. In: Proceedings of the 61st Annual Meeting of the Association for Computational Linguistics (Volume 1: Long Papers). Toronto, Canada: Association for Computational Linguistics; 2023. p. 9977– 10000. Available from: https://aclanthology.org/2023.acl-long.555
  159. [230]Zhang C, Chen Y, D’Haro LF, Zhang Y, Friedrichs T, Lee G, et al. DynaEval: unifying turn and dialogue level evaluation. In: Zong C, Xia F, Li W, Navigli R, editors. Proceedings of the 59th Annual Meeting of the Association for Computational Linguistics and the 11th International Joint Conference on Natural Language Processing (Volume 1: Long Papers). Online: Association for Computational Linguistics; 2021. p. 5676– 89. Available from: https://aclanthology.org/2021.acl-long.441
  160. [234]Lukas N, Salem A, Sim R, Tople S, Wutschitz L, Zanella-Béguelin S. Analyzing leakage of personally identifiable information in language models. In: 2023 IEEE Symposium on Security and Privacy (SP). IEEE; 2023. p. 346– 63.
  161. [235]Petroni F, Rocktaschel T, Riedel S, Lewis P, Bakhtin A, Wu Y, et al. Language models as knowledge bases? In: Proceedings of the 2019 Conference on Empirical Methods in Natural Language Processing and the 9th International Joint Conference on Natural Language Processing (EMNLP-IJCNLP); 2019. p. 2463– 73.
  162. [238]Gehman S, Gururangan S, Sap M, Choi Y, Smith NA. RealToxicityPrompts: evaluating neural toxic degeneration in language models. In: Findings of the Association for Computational Linguistics: EMNLP 2020; 2020. p. 3356– 69.
  163. [240]de Hond A, Leeuwenberg T, Bartels R, van Buchem M, Kant I, Moons KG, et al. From text to treatment: the crucial role of validation for generative large language models in health care. Lancet Digit Health. 2024; 6(7):e441– 3. doi: 10.1016/S2589-7500(24)00111-0 38906607 · DOI · Paper page
  164. [241]Protection of Human Subjects of Biomedical TNC, Research B. The Belmont Report: Ethical Principles and Guidelines for the Protection of Human Subjects of Research; 1979. Available from: https://www.hhs.gov/ohrp/regulations-and-policy/belmont-report/index.html 25951677
  165. [242]Solomonides AE, Koski E, Atabaki SM, Weinberg S, McGreevey JD, Kannry JL, et al. Defining AMIA’s artificial intelligence principles. J Am Med Inform Assoc. 2022; 29(4): 585– 91. doi: 10.1093/jamia/ocac006 35190824 PMC8922174 · DOI · Paper page
  166. [244]Zhao H, Chen H, Yang F, Liu N, Deng H, Cai H. Explainability for large language models: a survey. ACM Trans Intell Syst Technol. 2024;15(2). doi: 10.1145/3639372 · DOI · Paper page
  167. [246]Chu Z, Wang Z, Zhang W. Fairness in large language models: a taxonomic survey. SIGKDD Explorations Newsletter. 2024; 26(1): 34– 48. doi: 10.1145/3682112.3682117 · DOI
  168. [247]Sblendorio E, Dentamaro V, Lo Cascio A, Germini F, Piredda M, Cicolini G. Integrating human expertise & automated methods for a dynamic and multi-parametric evaluation of large language models’ feasibility in clinical decision-making. Int J Med Inform. 2024; 188: 105501. doi: 10.1016/j.ijmedinf.2024.105501 38810498 · DOI
  169. [248]Jie YW, Satapathy R, Goh R, Cambria E. How interpretable are reasoning explanations from prompting large language models? In: Findings of the Association for Computational Linguistics: NAACL 2024; 2024. p. 2148– 64.
  170. [249]Liu L, Zhang D, Li S, Zhou G, Cambria E. Two heads are better than one: zero-shot cognitive reasoning via multi-LLM knowledge fusion. In: Proceedings of the 33rd ACM International Conference on Information and Knowledge Management. 2024. p. 1462– 72.
  171. [250]Ong K, Mao R, Satapathy R, Shirota Filho R, Cambria E, Sulaeman J. Explainable natural language processing for corporate sustainability analysis. Information Fusion. 2025; 115: 102726.

Authors
Neveditsin, N., Lingras, P., & Mago, V.
Affiliations
  • Saint Mary's University (CA)
  • York University (CA)
Corresponding author
Mago, Vijay
Venue
PLOS Digital Health
Published
2025-05-08
Volume
4
Issue
5
Pages
e0000800
ISSN
2767-3170 (ISSN-L)
OpenAlex
W4410203956
Cited by
37
References
218
Citations by year
2026: 25 · 2025: 12
FWCI
2.19
Type
journal article
Language
en
Open access
Locations
  • PLOS Digital Health (publishedVersion, cc-by)
  • PubMed Central (publishedVersion, cc-by)
  • PubMed (publishedVersion)
  • arXiv (Cornell University) (submittedVersion, cc-by)
  • arXiv (Cornell University) (cc-by)
Topics
  • Health Sciences › Medicine › Health Informatics › Artificial Intelligence in Healthcare and Education
  • Physical Sciences › Computer Science › Artificial Intelligence › Machine Learning in Healthcare
  • Physical Sciences › Computer Science › Artificial Intelligence › Topic Modeling
Keywords
large language models, multimodal models, in-context learning, data privacy, clinical text generation, clinical information extraction, dialogue systems, clinical classification, ethics of AI in healthcare

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

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