The DOI matches its Crossref record; 4 of the 4 references it cites were found in a registry or an index.
A Coastal Cline in Sodium Accumulation in Arabidopsis thaliana Is Driven by Natural Variation of the Sodium Transporter AtHKT1;1
Open accessAbstract
The genetic model plant Arabidopsis thaliana, like many plant species, experiences a range of edaphic conditions across its natural habitat. Such heterogeneity may drive local adaptation, though the molecular genetic basis remains elusive. Here, we describe a study in which we used genome-wide association mapping, genetic complementation, and gene expression studies to identify cis-regulatory expression level polymorphisms at the AtHKT1;1 locus, encoding a known sodium (Na(+)) transporter, as being a major factor controlling natural variation in leaf Na(+) accumulation capacity across the global A. thaliana population. A weak allele of AtHKT1;1 that drives elevated leaf Na(+) in this population has been previously linked to elevated salinity tolerance. Inspection of the geographical distribution of this allele revealed its significant enrichment in populations associated with the coast and saline soils in Europe. The fixation of this weak AtHKT1;1 allele in these populations is genetic evidence supporting local adaptation to these potentially saline impacted environments.
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Cites
Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT Method
Livak, K. J., & Schmittgen, T. D. (2001) · Methods · doi:10.1006/meth.2001.1262 · Cited by 180,860
Mechanisms of Salinity Tolerance
Munns, R., & Tester, M. (2008) · Annual Review of Plant Biology · doi:10.1146/annurev.arplant.59.032607.092911 · Cited by 13,792
Mutation of the mouse klotho gene leads to a syndrome resembling ageing
Kuro-o, M., Matsumura, Y., Aizawa, H., Kawaguchi, H., Suga, T., Utsugi, T., Ohyama, Y., Kurabayashi, M., Kaname, T., Kume, E., et al. (1997) · Nature · doi:10.1038/36285 · Cited by 3,837
Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines
Atwell, S., Huang, Y. S., Vilhjálmsson, B. J., Willems, G., Horton, M., Li, Y., Meng, D., Platt, A., Tarone, A. M., Hu, T. T., et al. (2010) · Nature · doi:10.1038/nature08800 · Cited by 1,780
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Cited by
Roy, S. J., Negrão, S., & Tester, M. (2014) · Current Opinion in Biotechnology · doi:10.1016/j.copbio.2013.12.004 · Cited by 1,163
Genetic architecture of plant stress resistance: Multi-trait genome-wide association mapping
Thoen, M. P. M., Davila Olivas, N. H., Kloth, K. J., Coolen, S., Huang, P., Aarts, M. G. M., Bac‐Molenaar, J. A., Bakker, J., Bouwmeester, H. J., Broekgaarden, C., et al. (2017) · New Phytologist · doi:10.1111/nph.14220 · Cited by 188
“TheHapMappopulationhasbeengenotypedfor250000 bi-allelicSNPs(Baxter et al. , 2010; Platt et al. , 2010; Chao et al. , 2012) and after quality control and imputation this SNP set was reduced to a set of 214 051 SNPs.”
Metadata
- Authors
- Baxter, I., Brazelton, J. N., Yu, D., Huang, Y. S., Lahner, B., Yakubova, E., Li, Y., Bergelson, J., Borevitz, J. O., Nordborg, M., Vitek, O., & Salt, D. E.
- Venue
- PLoS Genetics
- Publisher
- Public Library of Science (PLoS)
- Published
- 2010-11-11
- Volume
- 6
- Issue
- 11
- Pages
- e1001193
- ISSN
- 1553-7390 (ISSN-L)
- 1553-7404
- OpenAlex
- W2139359390
- Cited by
- 348
- References
- 4
- FWCI
- 13.41
- Type
- journal article
- Language
- en
- Open access
- gold
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- Baxter, I., Brazelton, J. N., Yu, D., Huang, Y. S., Lahner, B., Yakubova, E., Li, Y., Bergelson, J., Borevitz, J. O., Nordborg, M., Vitek, O., & Salt, D. E. (2010). A Coastal Cline in Sodium Accumulation in Arabidopsis thaliana Is Driven by Natural Variation of the Sodium Transporter AtHKT1;1. PLoS Genetics. https://doi.org/10.1371/journal.pgen.1001193
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