Transposable Elements Are Major Contributors to the Origin, Diversification, and Regulation of Vertebrate Long Noncoding RNAs

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Items 101–200 of 713

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  4. Transposable Elements and DNA Methylation Create in Embryonic Stem Cells Human-Specific Regulatory Sequences Associated with Distal Enhancers and Noncoding RNAs
    Gennadi V. Glinsky · 2015 · Genome Biology and Evolution
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  8. Chemotherapy-induced transposable elements activate MDA5 to enhance haematopoietic regeneration
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    Deena Emera, Jun Yin, Steven K. Reilly, Jake Gockley, James P. Noonan · 2016 · Proceedings of the National Academy of Sciences
  10. LncRNAs in polyploid cotton interspecific hybrids are derived from transposon neofunctionalization
    Ting Zhao, Xiaoyuan Tao, Shouli Feng, Luyao Wang, Hui Hong, Wei Ma, Guan-Dong Shang, Shisong Guo, Yuxin He, Baoliang Zhou et al. · 2018 · Genome biology
  11. Super-lncRNAs: identification of lncRNAs that target super-enhancers via RNA:DNA:DNA triplex formation
    Benjamin Soibam · 2017 · RNA
  12. Transposable Element Exaptation into Regulatory Regions Is Rare, Influenced by Evolutionary Age, and Subject to Pleiotropic Constraints
    Corinne Simonti, Mihaela Pavličev, John A. Capra · 2017 · Molecular Biology and Evolution
  13. High-Quality Genome Assemblies Reveal Long Non-coding RNAs Expressed in Ant Brains
    Emily J. Shields, Lihong Sheng, Amber K. Weiner, Benjamin Aaron Garcia, Roberto Bonasio · 2018 · Cell Reports
  14. Long non-coding RNAs and transposable elements: A functional relationship
    Victoire Fort, Gabriel Khelifi, Samer M. I. Hussein · 2020 · Biochimica et Biophysica Acta (BBA) - Molecular Cell Research
  15. Role of Transposable Elements in Genome Stability: Implications for Health and Disease
    Audesh Bhat, Trupti Ghatage, Sonali Bhan, Ganesh Panditrao Lahane, Arti Dhar, Rakesh Kumar, RAJ KUMAR PANDITA, Krishna Moorthi Bhat, Kenneth S. Ramos, Tej Krishan Pandita · 2022 · International Journal of Molecular Sciences
  16. LINE-1 retrotransposons drive human neuronal transcriptome complexity and functional diversification
    Raquel Garza, Diahann A. M. Atacho, Anita Adami, Patricia Gerdes, Meghna Vinod, PingHsun Hsieh, Ofelia Karlsson, Vivien Horváth, Pia Annette Johansson, Ninoslav Pandiloski et al. · 2023 · Science Advances
  17. Comprehensive Identification of Long Non-coding RNAs in Purified Cell Types from the Brain Reveals Functional LncRNA in OPC Fate Determination
    Xiaomin Dong, Kenian Chen, Raquel Cuevas‐Díaz Durán, Yanan You, Steven A. Sloan, Ye Zhang, Shan Zong, Qilin Cao, Ben A. Barres, Jia Qian Wu · 2015 · PLoS Genetics
  18. Maize transposable elements contribute to long non-coding RNAs that are regulatory hubs for abiotic stress response
    Yuanda Lv, Fengqin Hu, Yongfeng Zhou, Feilong Wu, Ling Zhou, Brandon S. Gaut · 2019 · BMC Genomics
  19. Transposable element-derived sequences in vertebrate development
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  20. Long Noncoding RNAs as Diagnostic and Therapeutic Targets in Type 2 Diabetes and Related Complications
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  21. Transcriptional profiling of long non-coding RNAs in mantle of Crassostrea gigas and their association with shell pigmentation
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  22. Tissue-specific usage of transposable element-derived promoters in mouse development
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  23. Endogenous Double-Stranded RNA
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  24. The Structural, Functional and Evolutionary Impact of Transposable Elements in Eukaryotes
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  25. Adenosine-to-inosine Alu RNA editing controls the stability of the pro-inflammatory long noncoding RNA NEAT1 in atherosclerotic cardiovascular disease
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  26. Transposable elements as tissue-specific enhancers in cancers of endodermal lineage
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  27. A novel long intergenic noncoding RNA indispensable for the cleavage of mouse two‐cell embryos
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  28. The Central Role of Noncoding RNA in the Brain
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  29. Ancient exapted transposable elements promote nuclear enrichment of human long noncoding RNAs
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  30. Keeping abreast with long non-coding RNAs in mammary gland development and breast cancer
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  31. Transcriptome Analysis of Tolerant and Susceptible Maize Genotypes Reveals Novel Insights about the Molecular Mechanisms Underlying Drought Responses in Leaves
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  32. The Epigenetic Control of the Transposable Element Life Cycle in Plant Genomes and Beyond
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  33. Long non‐coding RNAs in corticogenesis: deciphering the non‐coding code of the brain
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  34. Long non-coding RNA identification over mouse brain development by integrative modeling of chromatin and genomic features
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  36. Primate-Specific Long Non-Coding RNAs and MicroRNAs
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  37. Emerging roles of macrosatellite repeats in genome organization and disease development
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  38. A subset of conserved mammalian long non-coding RNAs are fossils of ancestral protein-coding genes
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  39. The Genome of Cucurbita argyrosperma (Silver-Seed Gourd) Reveals Faster Rates of Protein-Coding Gene and Long Noncoding RNA Turnover and Neofunctionalization within Cucurbita
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  40. Environmental change and the evolution of genomes: Transposable elements as translators of phenotypic plasticity into genotypic variability
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  41. Repetitive elements in aging and neurodegeneration
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  42. MIR-NATs repress MAPT translation and aid proteostasis in neurodegeneration
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  43. Genomic and Epigenetic Complexity of the FOXF1 Locus in 16q24.1: Implications for Development and Disease
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  44. cis-Acting Complex-Trait-Associated lincRNA Expression Correlates with Modulation of Chromosomal Architecture
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  45. DNA transposon invasion and microsatellite accumulation guide W chromosome differentiation in a Neotropical fish genome
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  46. Rolling-Circle Transposons Catalyze Genomic Innovation in a Mammalian Lineage
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  49. Inverted repeatAluelements in the human lincRNA-p21 adopt a conserved secondary structure that regulates RNA function
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  50. A novel long non-coding RNA in the rheumatoid arthritis risk locus TRAF1-C5 influences C5 mRNA levels
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  51. Structural and Functional Annotation of Long Noncoding RNAs
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  52. Discovery of Novel Genes Derived from Transposable Elements Using Integrative Genomic Analysis
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  53. The Reverse Transcriptase Encoded by LINE-1 Retrotransposons in the Genesis, Progression, and Therapy of Cancer
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  57. Widespread roles of enhancer-like transposable elements in cell identity and long-range genomic interactions
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  60. Endogenous Retrovirus-Derived lncRNA BANCR Promotes Cardiomyocyte Migration in Humans and Non-human Primates
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  61. Role of Transposable Elements in Gene Regulation in the Human Genome
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  63. Novel Bioinformatics Approach Identifies Transcriptional Profiles of Lineage-Specific Transposable Elements at Distinct Loci in the Human Dorsolateral Prefrontal Cortex
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  67. Transposable Element Insertions in Long Intergenic Non-Coding RNA Genes
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  71. Allelic diversification after transposable element exaptation promotedgsdfas the master sex determining gene of sablefish
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