Metagenomic Sequencing of an In Vitro-Simulated Microbial Community

Cited by (246)

Items 201–246 of 246

  1. Genomes and Post-genome Technology
    Betânia Ferraz Quirino, Cristine Chaves Barreto, Georgios Joannis Pappas Jr, Karsten Zengler, Konstantinos Krampis, Ricardo Henrique Krüger · 2013 · Springer eBooks
  2. Molecular methods for biofilms
    Isabel Ferrera, Vanessa Balagué, Christian Robert Voolstra, Manuel Aranda, Till Bayer, Raeid M. M. Abed, Sergey Dobretsov, Sarah M. Owens, Jared Wilkening, Jennifer L. Fessler et al. · 2014 · Wiley eBooks
  3. Statistical analysis of metagenomic data
    Jonsson Viktor · 2014 · Chalmers Publication Library (Chalmers University of Technology)
  4. Sequence composition diversity in Alaskan glacier and other metagenomes
    Sulbha Choudhari, Roman J. Dial, Dibyendu Kumar, Daniel H. Shain, Andrey Grigoriev · 2014
  5. Lessons Learned from Simulated Metagenomic Datasets
    Germán Bonilla‐Rosso · 2013 · Springer eBooks
  6. Detection of ESKAPE pathogens and Clostridioides difficile in Simulated Skin Transmission Events with Metagenomic and Metatranscriptomic Sequencing
    Krista L. Ternus, Nicolette C. Keplinger, Anthony D. Kappell, Gene D. Godbold, Veena Palsikar, Carlos A. Acevedo, Katharina L. Weber, Danielle S. LeSassier, Kathleen Q. Schulte, Nicole Westfall et al. · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
  7. 123 of Metagenomics
    Torsten Thomas, Jack A. Gilbert, Folker Meyer · 2013 · Springer eBooks
  8. MEtaGenome ANalyzer (MEGAN): Metagenomic Expert Resource
    Daniel H. Huson · 2013 · Springer eBooks
  9. Multiscale Spatial Mapping of Microbial Communities for Biotherapeutic Development
    Prateek Sehgal, Andrea G. Shaw, Kevin Cutler, Bridget Letson, Gregory T. Booth, Gaetano J. Scuderi, Anjali Doshi, Peter J Diebold, Hannah Bronson, Maya Trisolini et al. · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
  10. Exploring the nature and diversity of microorganisms in healthcare and educational settings
    Nikki D’Arcy · 2014 · UCL Discovery (University College London)
  11. Developing statistical and algorithmic methods for shotgun metagenomics and time series analysis
    Xia, Li Charlie (author) · 2013 · viXra
  12. Zebrafish as a novel animal model for evaluating the human gastrointestinal microbiota in autism spectrum disorder
    Michael C. W. Toh · 2015 · The Atrium (University of Guelph)
  13. Algorithm development for next generation sequencing-based metagenome analysis
    Andrey O. Kislyuk · 2010 · SMARTech Repository (Georgia Institute of Technology)
  14. Microbial biodiversity of the atmosphere
    Ann M. Klein · 2015 · Scholars' Bank (University of Oregon)
  15. Evaluating performance of metagenomic characterization algorithms using in silico datasets generated with FASTQSim
    Anna Shcherbina, Darrell O. Ricke, Nelson Chiu · 2016 · bioRxiv (Cold Spring Harbor Laboratory)
  16. BASIC CONCEPTS IN THE MAMMALIAN GUT MICROBIOME Meta'omic Analytic Techniques for Studying the Intestinal Microbiome
    Xochitl C. Morgan, Curtis Huttenhower · 2014
  17. Methodology and Application of Metagenomics for the Characterization of Bacterial Populations in Aquatic Environments
    Salama, Yasser · 2016 · MacSphere (McMaster University)
  18. Insights into glacial metagenome and sequence biases in comparative metagenomics
    Sulbha Choudhari · 2015
  19. Novel genomic approaches to social interactions within human bacterial communities
    Teresa Nogueira · 2013
  20. Dynamics of microbial agents in urban sewers, combined sewer overflow and receiving surface waters
    Alessia Eramo · 2018
  21. Determinación del riesgo para el consumidor de la presencia de H. pylori y otros Helicobacter spp. patógenos en aguas de consumo mediante técnicas moleculares y metagenómica
    Irene Martín · 2021
  22. Peer Review #3 of "Diversity structure of the microbial communities in the guts of four neotropical termite species (v0.1)"
    2021 · PeerJ
  23. Peer Review #1 of "Diversity structure of the microbial communities in the guts of four neotropical termite species (v0.2)"
    2021 · PeerJ
  24. Peer Review #2 of "Diversity structure of the microbial communities in the guts of four neotropical termite species (v0.1)"
    2021 · PeerJ
  25. Peer Review #1 of "Diversity structure of the microbial communities in the guts of four neotropical termite species (v0.1)"
    2021 · PeerJ
  26. Status of Phosphogypsum Reductive Decomposition and Feasibility Analysis of Biodecomposition
    双骥 李 · 2022 · Advances in Environmental Protection
  27. Peer Review #2 of "Evaluation of ddRADseq for reduced representation metagenome sequencing (v0.1)"
    2017 · PeerJ
  28. Peer Review #2 of "PhyloSift: phylogenetic analysis of genomes and metagenomes (v0.1)"
    2014 · PeerJ
  29. Peer Review #1 of "PhyloSift: phylogenetic analysis of genomes and metagenomes (v0.1)"
    2014 · PeerJ
  30. Peer Review #1 of "Evaluation of ddRADseq for reduced representation metagenome sequencing (v0.1)"
    2017 · PeerJ
  31. Peer Review #1 of "Strain- and plasmid-level deconvolution of a synthetic metagenome by sequencing proximity ligation products (v0.1)"
    2014 · PeerJ
  32. Lessons Learned from Simulated Metagenomic Datasets
    Germán Bonilla‐Rosso · 2015 · Springer eBooks
  33. Peer Review #2 of "Strain- and plasmid-level deconvolution of a synthetic metagenome by sequencing proximity ligation products (v0.1)"
    2014 · PeerJ
  34. Peer Review #1 of "PhyloSift: phylogenetic analysis of genomes and metagenomes (v0.2)"
    2014 · PeerJ
  35. The human gastroinstestinal tract microbiota in health – current knowledge summary
    Monika Prylińska, Marcin Kożuchowski · 2022 · Journal of Education Health and Sport
  36. Applications of “Omics” Sciences in the Laboratory
    Valeria D’Argenio, Barbara Lombardo, Marcella Nunziato, Lucio Pastore · 2023 · Springer eBooks
  37. Metagenomic analysis microbial biodiversity of Trojena’ the Mountains of Neom
    Amenah S Alotaib, Waqas Anwar, Hanin Qasem Albalawi, Hind Saleem Albalawi, Mohammed Ali Alshehri, Fatimah Mohammed S Alatawi, Ibrahim T Al Joundi, Abdulrahman Y Al Samini, Rashed Z Alqarni, Nawaf E Alzahrani et al. · 2025 · Cellular and Molecular Biology
  38. Next-Generation Sequence (NGS) Analysis: Current Trends, Techniques, and Applications
    Shobana Narayanasamy, U. Vasanth Kumar, Sriram Lakshmanan, Sivakumar Uthandi · 2025 · Springer handbooks
  39. Molecular and cultural analysis of the bacterial flora associated with brain abscesses
    Mouhamad Al Masalma · 2011 · theses.fr (ABES)
  40. Diversité microbienne dans les bioaérosols émis dans les centres de tri des déchets
    Jodelle Degois · 2018 · theses.fr (ABES)
  41. Compartmentalization of class 1 integrons and IncP-1 plasmids in the Orne river (France), an aquatic ecosystem impacted by urban and industrial anthropogenic pressures
    Magali de la Cruz Barrón · 2018 · theses.fr (ABES)
  42. The Great Microbiome Extraction Anomaly: How Extraction Bias Distorts Microbial Community Profiles
    Daniel J. Browne · 2026 · Environmental DNA
  43. Quantitative metabarcoding for invertebrate pest monitoring and management
    Lachlan J. Gretgrix, Jack L. Scanlan, Francesco Martoni, Mark J. Blacket, Brendan Rodoni, Alexander M Piper · 2026 · Journal of Economic Entomology
  44. The impact of DNA extraction methods on species quantification and apparent community composition of in vitro oral biofilms
    Jan-Ole Reese, Ingrid Maria Castro Lund, Håvard Jostein Haugen, Athanasios Saragliadis, Ståle Petter Lyngstadaas, Dirk Linke · 2026 · FEMS Microbiology Letters
  45. Identification of Environmental Alphaproteobacteria with Conserved Signature Proteins in Metagenomic Datasets
    Quan Yao · 2013 · MacSphere (McMaster University)
  46. Targeted Computational Approaches for Mining Functional Elements in Metagenomes
    Yu‐Wei Wu · 2013 · IUScholarWorks (Indiana University)