Diagnosis of Hemoglobinopathy and β-Thalassemia by 21 Tesla Fourier Transform Ion Cyclotron Resonance Mass Spectrometry and Tandem Mass Spectrometry of Hemoglobin from Blood
Abstract
BACKGROUND: Hemoglobinopathies and thalassemias are the most common genetically determined disorders. Current screening methods include cation-exchange HPLC and electrophoresis, the results of which can be ambiguous because of limited resolving power. Subsequently, laborious genetic testing is required for confirmation. METHODS: We performed a top-down tandem mass spectrometry (MS/MS) approach with a fast data acquisition (3 min), ultrahigh mass accuracy, and extensive residue cleavage by use of positive electrospray ionization 21 Tesla Fourier transform ion cyclotron resonance–tandem mass spectrometry (21 T FT-ICR MS/MS) for hemoglobin (Hb) variant de novo sequencing and β-thalassemia diagnosis. RESULTS: We correctly identified all Hb variants in blind analysis of 18 samples, including the first characterization of homozygous Hb Himeji variant. In addition, an Hb heterozygous variant with isotopologue mass spacing as small as 0.0194 Da (Hb AD) was resolved in both precursor ion mass spectrum (MS1) and product ion mass spectrum (MS2). In blind analysis, we also observed that the abundance ratio between intact δ and β subunits (δ/β) or the abundance ratio between intact δ and α subunits (δ/α) could serve to diagnose β-thalassemia trait caused by a mutation in 1 HBB gene. CONCLUSIONS: We found that 21 T FT-ICR MS/MS provides a benchmark for top-down MS/MS analysis of blood Hb. The present method has the potential to be translated to lower resolving power mass spectrometers (lower field FT-ICR mass spectrometry and Orbitrap) for Hb variant analysis (by MS1 and MS2) and β-thalassemia diagnosis (MS1).
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He et al. used ultrahigh-resolution MS on a 21 T FTICR to diagnose hemoglobinopathy and β-thalassemia from blood with a 3 min assay.
“He et al. utilized ultrahigh-resolution MS on a 21 T FTICR enabling the diagnosis of hemoglobinopathy and β-thalassemia from blood with a 3 min assay [158].”
From Top-down proteomics: challenges, innovations, and applications in basic and clinical research (2020) · cites this paper as [158]
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Cites
Wessel, D., & Flügge, U. (1984) · Analytical Biochemistry · doi:10.1016/0003-2697(84)90782-6 · Cited by 3,997 · see citing works
Space charge effects in Fourier transform mass spectrometry. II. Mass calibration
Ledford, E. B., Rempel, D. L., & Gross, M. L. (1984) · Analytical Chemistry · doi:10.1021/ac00278a027 · Cited by 469 · see citing works
Hardison, R. C., Chui, D. H. K., Giardine, B., Riemer, C., Patrinos, G. P., Anagnou, N., Miller, W., & Wajcman, H. (2002) · Human Mutation · doi:10.1002/humu.10044 · Cited by 439 · see citing works
Hendrickson, C. L., Quinn, J. P., Kaiser, N. K., Smith, D. F., Blakney, G. T., Chen, T., Marshall, A. G., Weisbrod, C. R., & Beu, S. C. (2015) · Journal of the American Society for Mass Spectrometry · doi:10.1007/s13361-015-1182-2 · Cited by 278 · see citing works
Self-citationSidell, B. D., & O’Brien, K. M. (2006) · Journal of Experimental Biology · doi:10.1242/jeb.02091 · Cited by 269 · see citing works
KOHNE, E. (2011) · Deutsches Ärzteblatt international · doi:10.3238/arztebl.2011.0532 · Cited by 234 · see citing works
Shi, S. D. ‐., Drader, J. J., Freitas, M. A., Hendrickson, C. L., & Marshall, A. G. (2000) · International Journal of Mass Spectrometry · doi:10.1016/s1387-3806(99)00226-2 · Cited by 181 · see citing works
Self-citationClassification of the Disorders of HemoglobinPreprint
Forget, B. G., & Bunn, H. F. (2013) · Cold Spring Harbor Perspectives in Medicine · doi:10.1101/cshperspect.a011684 · Cited by 181 · see citing works
Rapid Identification of Hemoglobin Variants by Electrospray Ionization Mass Spectrometry
Wild, B. J., Green, B. N., Cooper, E., Lalloz, M. R. A., Erten, S., Stephens, A. D., & Layton, D. M. (2001) · Blood Cells Molecules and Diseases · doi:10.1006/bcmd.2001.0430 · Cited by 122 · see citing works
Edwards, R. L., Creese, A. J., Baumert, M., Griffiths, P., Bunch, J., & Cooper, H. J. (2011) · Analytical Chemistry · doi:10.1021/ac1030804 · Cited by 110 · see citing works
Advances in detection of hemoglobinopathies
Greene, D. N., Vaughn, C. P., Crews, B. O., et al. (2014) · Clinica Chimica Acta · doi:10.1016/j.cca.2014.10.006 · Cited by 88 · see citing works
Daniel, Y., Turner, C., Haynes, R., et al. (2005) · British Journal of Haematology · doi:10.1111/j.1365-2141.2005.05646.x · Cited by 88 · see citing works
Newborn Screening for Sickle Cell Disease Using Tandem Mass Spectrometry
Boemer, F., Ketelslegers, O., Minon, J., et al. (2008) · Clinical Chemistry · doi:10.1373/clinchem.2008.106369 · Cited by 83 · see citing works
Human Hæmoglobin A2: Chemistry, Genetics and Evolution
Ingram, V. M., & Stretton, A. O. W. (1961) · Nature · doi:10.1038/1901079a0 · Cited by 76 · see citing works
A new index to discriminate between iron deficiency anemia and thalassemia trait
Matos, J. F., Dusse, L. M. S., Borges, K. B. G., de Castro, R. L. V., Coura‐Vital, W., & Ferriani, M. D. G. C. (2016) · Revista Brasileira de Hematologia e Hemoterapia · doi:10.1016/j.bjhh.2016.05.011 · Cited by 66 · see citing works
Native Top-down Mass Spectrometry for the Structural Characterization of Human Hemoglobin
Zhang, J., Malmirchegini, G. R., Clubb, R. T., & Loo, J. A. (2015) · European Journal of Mass Spectrometry · doi:10.1255/ejms.1340 · Cited by 48 · see citing works
Edwards, R. L., Griffiths, P., Bunch, J., & Cooper, H. J. (2014) · PROTEOMICS · doi:10.1002/pmic.201300316 · Cited by 45 · see citing works
Moat, S. J., Rees, D., King, L., et al. (2013) · Clinical Chemistry · doi:10.1373/clinchem.2013.210948 · Cited by 43 · see citing works
Boemer, F., Cornet, Y., Libioulle, C., et al. (2011) · Clinica Chimica Acta · doi:10.1016/j.cca.2011.04.031 · Cited by 38 · see citing works
Théberge, R., Dikler, S., Heckendorf, C. F., Chui, D. H. K., Costello, C. E., & McComb, M. E. (2015) · Journal of the American Society for Mass Spectrometry · doi:10.1007/s13361-015-1164-4 · Cited by 29 · see citing works
He, L., Anderson, L. C., Barnidge, D. R., Murray, D. L., Dasari, S., Dispenzieri, A. A., Hendrickson, C. L., & Marshall, A. G. (2019) · Analytical Chemistry · doi:10.1021/acs.analchem.8b03294 · Cited by 28 · see citing works
Self-citationHaynes, C. A., Guerra, S. L., Fontana, J. C., et al. (2013) · Clinica Chimica Acta · doi:10.1016/j.cca.2013.06.007 · Cited by 28 · see citing works
Graça, D. C., Hartmer, R., Jabs, W., et al. (2015) · Analytical and Bioanalytical Chemistry · doi:10.1007/s00216-015-8525-5 · Cited by 20 · see citing works
He, L., Weisbrod, C. R., & Marshall, A. G. (2017) · International Journal of Mass Spectrometry · doi:10.1016/j.ijms.2017.11.012 · Cited by 16 · see citing works
Self-citationHemoglobin Himeji and inconsistent hemoglobin A1c values: a case report
Guedes, V., Bettencourt‐Silva, R., Queirós, J. C., Esteves, M. D. L., Teles, M. J., & Carvalho, D. M. (2017) · Journal of Medical Case Reports · doi:10.1186/s13256-017-1377-1 · Cited by 7 · see citing works
Newborn Screening for Sickle Cell Disease through Use of Tandem Mass Spectrometry
Turner, C., Daniel, Y., & Dalton, R. N. (2009) · Clinical Chemistry · doi:10.1373/clinchem.2008.120964 · Cited by 5 · see citing works
Evaluation Of Mass Spectrometry Based Approaches For The Diagnosis Of Hemoglobinopathies
Nicolle, S., Jackson, N., Radi, K., et al. (2013) · Blood · doi:10.1182/blood.v122.21.4679.4679 · Cited by 3 · see citing works
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Top-down proteomics: challenges, innovations, and applications in basic and clinical research
Brown, K. A., Melby, J. A., Roberts, D. S., & Ge, Y. (2020) · Expert Review of Proteomics · doi:10.1080/14789450.2020.1855982 · Cited by 152 · see citing works
Neubert, H., Shuford, C. M., Olah, T. V., Garofolo, F., Schultz, G. A., Jones, B. R., Amaravadi, L., Laterza, O. F., Xu, K., & Ackermann, B. L. (2020) · Clinical Chemistry · doi:10.1093/clinchem/hvz022 · Cited by 109 · see citing works
- Authors
- He, L., Rockwood, A. L., Agarwal, A. M., Anderson, L. C., Weisbrod, C. R., Hendrickson, C. L., & Marshall, A. G.
- Affiliations
- Florida State University (US)
- University of Utah (US)
- Corresponding author
- Marshall, Alan G
- ORCID
- Venue
- Clinical Chemistry
- Publisher
- Oxford University Press (OUP)
- Published
- 2019-08-01
- Volume
- 65
- Issue
- 8
- Pages
- 986-994
- ISSN
- 0009-9147 (ISSN-L)
- 1530-8561
- OpenAlex
- W2942883750
- Cited by
- 43
- References
- 28
- Citations by year
- 2026: 5 · 2025: 5 · 2024: 3 · 2023: 4 · 2022: 5 · 2021: 7 · 2020: 10 · 2019: 3
- FWCI
- 3.43
- Type
- journal article
- Language
- en
- Open access
- closed
- Licence
- academic.oup.com/journals/pages/open_access/funder_policies/chorus/standard_publication_model (vor)
- Locations
- Clinical Chemistry (publishedVersion)
- PubMed (publishedVersion)
- Funders
- National Science Foundation (DMR-1,644,779, 1157490)
- Division of Materials Research (1644779, DMR- 1644779, 11‐57490, DMR 1157490)
- State of Florida
- Topics
- Health Sciences › Medicine › Genetics › Hemoglobinopathies and Related Disorders
- Physical Sciences › Chemistry › Spectroscopy › Mass Spectrometry Techniques and Applications
- Physical Sciences › Chemistry › Spectroscopy › Advanced Proteomics Techniques and Applications
- Keywords
- hemoglobinopathies, beta-thalassemia, hemoglobin variants, beta-globin gene mutations
- MeSH terms
- Amino Acid Sequence, Fourier Analysis, Hemoglobinopathies, Hemoglobins, Humans, Sensitivity and Specificity, Mass Spectrometry, Genetic Variation, beta-Thalassemia, Cyclotrons, Sequence Analysis, Protein, Tandem Mass Spectrometry, alpha-Globins, beta-Globins, delta-Globins
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