The DOI matches its Crossref record; 5 of the 5 references it cites were found in a registry or an index.
Advanced methods of microscope control using μManager software
Open accessAbstract
µManager is an open-source, cross-platform desktop application, to control a wide variety of motorized microscopes, scientific cameras, stages, illuminators, and other microscope accessories. Since its inception in 2005, µManager has grown to support a wide range of microscopy hardware and is now used by thousands of researchers around the world. The application provides a mature graphical user interface and offers open programming interfaces to facilitate plugins and scripts. Here, we present a guide to using some of the recently added advanced µManager features, including hardware synchronization, simultaneous use of multiple cameras, projection of patterned light onto a specimen, live slide mapping, imaging with multi-well plates, particle localization and tracking, and high-speed imaging.
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Cites
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Computer Control of Microscopes Using µManager
Edelstein, A., Amodaj, N., Hoover, K., Vale, R., & Stuurman, N. (2010) · Current Protocols in Molecular Biology · doi:10.1002/0471142727.mb1420s92 · Cited by 1,670
Self-citationTomer, R., Khairy, K., Amat, F., & Keller, P. J. (2012) · Nature Methods · doi:10.1038/nmeth.2062 · Cited by 545
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Huang, Z., Zhu, H., Long, F., Ma, H., Qin, L., Liu, Y., Ding, J., Zhang, Z., Luo, Q., & Zeng, S. (2011) · Optics Express · doi:10.1364/oe.19.019156 · Cited by 77
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Metadata
- Authors
- D. Edelstein, A., A. Tsuchida, M., Amodaj, N., Pinkard, H., D. Vale, R., & Stuurman, N.
- Venue
- Journal of Biological Methods
- Publisher
- Journal of Biological Methods
- Published
- 2014-11-07
- Volume
- 1
- Issue
- 2
- Pages
- 1
- ISSN
- 2326-9901 (ISSN-L)
- OpenAlex
- W2137753785
- Cited by
- 1,909
- References
- 5
- FWCI
- 41.35
- Type
- journal article
- Language
- en
- Open access
- diamond
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Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.