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Molecular crowding and RNA synergize to promote phase separation, microtubule interaction, and seeding of Tau condensates
Open accessAbstract
Biomolecular condensation of the neuronal microtubule‐associated protein Tau (MAPT) can be induced by coacervation with polyanions like RNA, or by molecular crowding. Tau condensates have been linked to both functional microtubule binding and pathological aggregation in neurodegenerative diseases. We find that molecular crowding and coacervation with RNA, two conditions likely coexisting in the cytosol, synergize to enable Tau condensation at physiological buffer conditions and to produce condensates with a strong affinity to charged surfaces. During condensate‐mediated microtubule polymerization, their synergy enhances bundling and spatial arrangement of microtubules. We further show that different Tau condensates efficiently induce pathological Tau aggregates in cells, including accumulations at the nuclear envelope that correlate with nucleocytoplasmic transport deficits. Fluorescent lifetime imaging reveals different molecular packing densities of Tau in cellular accumulations and a condensate‐like density for nuclear‐envelope Tau. These findings suggest that a complex interplay between interaction partners, post‐translational modifications, and molecular crowding regulates the formation and function of Tau condensates. Conditions leading to prolonged existence of Tau condensates may induce the formation of seeding‐competent Tau and lead to distinct cellular Tau accumulations. Condensation of the microtubule‐associated protein Tau is induced by the presence of polyanions like RNA or by molecular crowding. Here we show that these conditions have synergistic effects on Tau condensation and Tau‐dependent microtubule bundling in vitro, and on the seeding of Tau aggregates in cells. Conditions that induce liquid‐liquid phase separation have distinct effects on Tau condensation and subcellular localization, including formation of Tau‐positive inclusions along the nuclear envelope that correlate with nucleocytoplasmic transport deficits.
Overview
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TL;DR
Molecular crowding and RNA synergize to enable Tau condensation at physiological ion conditions and produce condensates with strong affinity to charged surfaces. Aged Tau condensates, including non-percolating Tau:RNA coacervates, seed pathological Tau accumulations in cells, including nuclear-envelope Tau linked to nucleocytoplasmic transport deficits.
Key findings
- Crowding plus RNA stabilized Tau condensates against salt: Tau:RNA coacervates disappeared at 25 mM NaCl, Tau:PEG condensates destabilized at 100 mM NaCl, but Tau:PEG:RNA condensates did not change between 5 and 150 mM NaCl and still formed at 300 mM NaCl. In axoplasm-like X/2 buffer, Tau:PEG formed condensates and Tau:PEG:RNA formed more robustly, while Tau:RNA coacervation was inhibited. Growth kinetics gave coarsening exponents b = 0.44 for Tau:PEG:RNA, b = 0.15 for Tau:RNA, and b = 0.18 for Tau:PEG.
- Phosphorylated Tau failed to coacervate with RNA alone but condensed with PEG; in p-Tau:PEG:RNA systems RNA co-partitioned into condensates and condensates formed at elevated NaCl. PKA-phosphorylated Tau showed the highest in-solution LLPS and surface wetting in Tau:PEG:RNA, while pT205 and pS404 had little effect or inhibited condensation and pS262/pS356/pS324 appeared to favor LLPS.
- Tubulin co-partitioned into Tau:PEG, Tau:RNA, and Tau:PEG:RNA condensates, with RNA and tubulin competing for co-condensation. Tau:PEG:RNA produced thick MT bundles arranged around persisting condensates, whereas Tau:PEG produced thin, partly curved bundles; nocodazole stability was higher for Tau:PEG than Tau:PEG:RNA MTs.
- 24 h-old Tau:PEG, Tau:RNA, and Tau:PEG:RNA condensates formed SDS-stable Tau dimers/oligomers and increased TauΔK280 aggregation in Thioflavin-T assays. Tau:RNA coacervates induced Tau aggregation in HEK sensor cells more efficiently than PEG-induced condensates and similar to Tau:PEG:RNA; RNA-containing condensates induced nuclear-envelope Tau with the highest frequency (26%), while heparin-induced aggregates mostly seeded cytoplasmic accumulations (74% CYT, 18% NE, 8% NUC). NE Tau had faster FRAP (t1/2 ≈ 2.5 s) than CYT Tau (t1/2 ≈ 7 s), and FLIM distinguished soluble Tau (LT-1 ~2.3 ns), NE Tau (LT-2 ~2.2 ns), CYT/NUC Tau (LT-3 ~2.1 ns), and a subset of CYT Tau (LT-4 ~2.0 ns).
Methods
- In vitro LLPS used recombinant human full-length Tau (2N4R, 5 µM), p-Tau from Sf9 cells, TauΔK280, and in vitro phosphorylated Tau variants; condensation was induced with polyA, tRNA, heparin, PEG8000, or combinations. Main techniques included time-resolved dynamic light scattering, light/confocal microscopy, turbidity, FRAP, FLIM, sedimentation assays, SDS–PAGE, semi-native PAGE, dot blots, and Thioflavin-T aggregation assays.
- Cellular and tissue work used HEK293 TauRDP301S-CFP/YFP sensor cells treated with 24 h-old Tau condensates or AD brain lysate, primary mouse hippocampal neurons expressing TauRDP301S-CFP/YFP, and human AD/control brain sections. Analyses included confocal imaging, FRAP, FLIM, immunofluorescence, and statistics by Student’s t-test or one-way ANOVA with Tukey/Holmes–Sidak correction.
Limitations
- The paper states that effects of individual or grouped Tau post-translational modifications need further investigation due to their complexity, and that preferential induction of certain Tau accumulation types by different seeds is not conclusive at this point. It also notes that NE Tau fusion was not observed, possibly due to time/spatial resolution limits or progressed percolation, and that in vitro versus cellular differences (crowding, ion composition, pH, other biomolecules; TauRD versus full-length Tau) may affect FLIM comparisons.
- Evident from the text: many mechanistic conclusions rely on in vitro reconstitution with purified proteins and on HEK sensor cells, with 5% PEG8000 used to induce LLPS at physiological Tau concentrations; the work does not directly demonstrate endogenous Tau condensates in neurons, and cellular seeding assays use lipofectamine and tagged TauRD constructs.
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![Figure 6 Tau coacervates and condensates produce Tau species with seeding potential SDS–PAGE of Tau incubated in LLPS (PEG, tRNALLPS, PEG:tRNALLPS) or aggregation (hepAGG) conditions for 1 h, 24 h, or 72 h. SDS‐stable Tau dimers and oligomers species evolve in LLPS and hepAGG samples after 24 h. After 72 h, all conditions contain SDS‐stable Tau oligomers and dimers.Thioflavin‐T assay for the enhancement of in vitro Tau aggregation by aged Tau condensates. TauΔK280 (10 µM) incubated with heparin (molar ratio Tau:heparin = 4:1; [TauΔK280]AGG) was used as baseline condition for Tau aggregation. Addition of 24 h‐old or 72 h‐old Tau LLPS samples (9.2 µg/ml = 0.2 µM Tau) produced an increase in TauΔK280 aggregation for all LLPS conditions (PEG, tRNA, PEG:tRNA) and hepAGG. Addition of Tau only did not affect TauΔK280 aggregation. Data shown as mean ± SD, n = 3. One‐way ANOVA with Tukey test for multiple comparison for values at 30 h. *P < 0.05, **P < 0.01, ***P < 0.001, ****P < 0.0001.HEK sensor cell Tau aggregation assay. Cells were treated with 24 h‐old condensates or aggregates (1.2 µMTau in the presence of 0.8% lipofectamine). The number of Tau aggregates was determined from low magnification (20×) images taken in the green channel and normalized to the number of cells (DAPI). Scale bar = 100 μm.Quantification of seeding assay in (C). Data were collected from three images of 3 wells for each condition. Numbers in the graph give the number of analyzed cells per condition. Data shown as mean ± SD, N = 3 experiments, 1–3 images per experiment and condition. One‐way ANOVA with Tukey test for multiple comparison. *P < 0.05, **P < 0.01, ***P < 0.001, ****P < 0.0001.Cell toxicity (LDH assay) induced by treatment of HEK sensor cells with condensates or aggregates. N = 3 experiments. Data shown as mean ± SD. One‐way ANOVA with Tukey test for multiple comparison. *P < 0.05, **P < 0.01, ***P < 0.001, ****P < 0.0001.](/paper-figures/e6d58a3613744747a89231b6f3654f1f/molecular-crowding-and-rna-synergize-to-promote-phase-separation-microtubule-figure-6.jpg)
![Figure EV5 Oligomerization and seeding of pro‐aggregant TauΔK280 condensates A, BSDS–PAGE (A) and SemiNative PAGE (B) of TauΔK280 incubated in LLPS (PEG, tRNALLPS, heparinLLPS) or aggregation (tRNAAGG, heparinAGG) conditions for 1 h, 24 h, or 72 h.CNative PAGE and SDS–PAGE of 5 μM TauΔK280 in condensation and aggregation conditions incubated for 24 h. Even for low amounts of TauΔK280, PEG‐, RNA‐ and heparin‐induced condensates lead to the formation of SDS‐stable Tau dimers.DDot blot analysis of TauΔK280 oligomers (2B10 antibody) in 24 h‐old condensation and aggregation samples shows oligomeric Tau in aggregation conditions compared to Tau only treatment. N = 3 independent experiments. Data shown as mean ± SEM, one‐way ANOVA with Holmes‐Sidak post‐test. *P < 0.05, **P < 0.01, ***P < 0.001, ****P < 0.0001.EThioflavin‐T assay for the enhancement of in vitro Tau aggregation by TauΔK280 condensates. TauΔK280 (10 µM) incubated with heparin (molar ratio Tau:heparin = 4:1; [TauΔK280]AGG) was used as baseline condition for Tau aggregation. Addition of 24 h‐old or 72 h‐old TauΔK280 LLPS samples (9.2 μg/ml, molar ratio TauΔK280:condensates = 50:1) to the reaction showed a significant increase of TauΔK280 aggregation for all LLPS conditions (PEGLLPS, tRNALLPS, PEG:tRNALLPS), which was comparable to the effect of pre‐aggregated TauΔK280 (hepAGG). Addition of TauΔK280 only showed no effect on TauΔK280 aggregation. Data shown as mean ± SD, N = 3 experiments, with 3 technical replicates per experiment. One‐way ANOVA with Tukey post‐test for multiple comparison for values at 30 h. *P < 0.05, **P < 0.01, ***P < 0.001, ****P < 0.0001.](/paper-figures/a554a6b85b9345288da4f126b9d0481c/molecular-crowding-and-rna-synergize-to-promote-phase-separation-microtubule-figure-11.jpg)




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“We find that molecular crowding and coacervation with RNA, two conditions likely coexisting in the cytosol, synergize to enable Tau condensation at physiological buffer conditions and to produce condensates with a strong affinity to charged surfaces.”
§ Molecular crowding and RNA synergize to promote phase separation, microtubule interaction, and seeding of Tau condensates > Abstract
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In the paper
“We further show that different Tau condensates efficiently induce pathological Tau aggregates in cells, including accumulations at the nuclear envelope that correlate with nucleocytoplasmic transport deficits.”
§ Molecular crowding and RNA synergize to promote phase separation, microtubule interaction, and seeding of Tau condensates > Abstract
plainstates a cause- Asserted: passes — The authors put it forward as true.
- Checkable: passes — It can be checked against evidence.
- Load-bearing: passes — The paper’s conclusions depend on it.
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In the paper
“Fluorescent lifetime imaging reveals different molecular packing densities of Tau in cellular accumulations and a condensate‐like density for nuclear‐envelope Tau.”
§ Molecular crowding and RNA synergize to promote phase separation, microtubule interaction, and seeding of Tau condensates > Abstract
plainstates an association- Asserted: passes — The authors put it forward as true.
- Checkable: passes — It can be checked against evidence.
- Load-bearing: passes — The paper’s conclusions depend on it.
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A result the paper reports from its own data — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“We find that molecular crowding and coacervation with RNA, two conditions likely coexisting in the cytosol, synergize to enable Tau condensation at physiological buffer conditions and to produce condensates with a strong affinity to charged surfaces.”
- Also stated in: § RNA and crowding synergize during Tau condensation · plain
“In summary, we found that polyanions and crowding synergize during Tau condensation producing Tau condensates that exhibit growth kinetics indicative of Ostwald ripening (= growth through fusion of condensates) as previously reported for other biomolecular condensates (Van Lindt et al, 2021).”
§ Molecular crowding and RNA synergize to promote phase separation, microtubule interaction, and seeding of Tau condensates > Abstract
plainstates a cause- Asserted: passes — The authors put it forward as true.
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- Rests on an assumption not shown here.
- Also stated in: § RNA and crowding synergize during Tau condensation · plain
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In the paper
“During condensate‐mediated microtubule polymerization, their synergy enhances bundling and spatial arrangement of microtubules.”
§ Molecular crowding and RNA synergize to promote phase separation, microtubule interaction, and seeding of Tau condensates > Abstract
plainstates a cause- Asserted: passes — The authors put it forward as true.
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Percentages, sums and reported differences re-computed from the paper’s own numbers.
Each contradiction between two passages listed here was confirmed by an independent check.
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In the paper
§ Molecular crowding and RNA synergize to promote phase separation, microtubule interaction, and seeding of Tau condensates > Results > Nuclear envelope Tau is loosely packed compared to cytosolic Tau aggregates
“High‐resolution CFP FLIM of HEK sensor cells expressing TauRDP301L‐CFP/YFP and treated with Tau condensates.”
§ Molecular crowding and RNA synergize to promote phase separation, microtubule interaction, and seeding of Tau condensates > Results > Nuclear envelope Tau is loosely packed compared to cytosolic Tau aggregates
“FRET‐FLIM imaging of HEK sensor cells expressing TauRDP301S‐CFP/YFP revealed reduced CFP lifetimes in all Tau accumulations compared to cytosolic soluble TauRD‐CFP (Fig 8C).”
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In the paper
§ Molecular crowding and RNA synergize to promote phase separation, microtubule interaction, and seeding of Tau condensates > Results > Decoupling of Tau seeding potential and percolation in Tau coacervates
“tRNALLPS: P = 0.0403 compared to Tau only; Fig EV4G”
§ Molecular crowding and RNA synergize to promote phase separation, microtubule interaction, and seeding of Tau condensates > Results > Crowding, but not polyanions, induce gelation of Tau condensates
“P = 0.043 for tRNALLPS”
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In the paper
§ Molecular crowding and RNA synergize to promote phase separation, microtubule interaction, and seeding of Tau condensates > Results > Nuclear envelope Tau is loosely packed compared to cytosolic Tau aggregates
“Similar results were obtained upon full bleach of 4 h‐old Tau:PEG:RNA condensates (Fig EV4A).”
§ Molecular crowding and RNA synergize to promote phase separation, microtubule interaction, and seeding of Tau condensates > Results > Crowding, but not polyanions, induce gelation of Tau condensates
“FRAP of 4 h‐old Tau:polyA condensates comparing different FRAP ROI sizes at similar condensate size (ROI1 versus ROI2) and full condensate bleach (ROI3).”
Rated minor: it would not touch a result — a value no result rests on, a p-value that stays on the same side of the significance level, or a conflict that is clerical, resolved elsewhere in the paper, or outside its own findings.
In the paper
§ Molecular crowding and RNA synergize to promote phase separation, microtubule interaction, and seeding of Tau condensates > Results > Decoupling of Tau seeding potential and percolation in Tau coacervates
“1.2 µM Tau in culture medium including 1% lipofectamine for 2 h”
§ Molecular crowding and RNA synergize to promote phase separation, microtubule interaction, and seeding of Tau condensates > Materials and Methods > Cellular Tau seeding assay
“Tau condensates were mixed with 0.8% lipofectamine 2000 (Invitrogen)”
Rated minor: it would not touch a result — a value no result rests on, a p-value that stays on the same side of the significance level, or a conflict that is clerical, resolved elsewhere in the paper, or outside its own findings.
In the paper
§ Molecular crowding and RNA synergize to promote phase separation, microtubule interaction, and seeding of Tau condensates > Results > Decoupling of Tau seeding potential and percolation in Tau coacervates
“High concentrations of heparin (287 µg/ml; hepAGG) induce β‐structured Tau aggregates”
§ Molecular crowding and RNA synergize to promote phase separation, microtubule interaction, and seeding of Tau condensates > Materials and Methods > Tau LLPS and aggregation sample preparation
“0.287 µg/ml heparin (4:1, Tau:heparin) to 25 µM Tau”
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Metadata
- Authors
- Hochmair, J., Exner, C., Franck, M., Dominguez‐Baquero, A., Diez, L., Brognaro, H., Kraushar, M. L., Mielke, T., Radbruch, H., Kaniyappan, S., Falke, S., Mandelkow, E., Betzel, C., & Wegmann, S.
- Affiliations
- German Center for Neurodegenerative Diseases (DE)
- Universität Hamburg (DE)
- Max Planck Institute for Molecular Genetics (DE)
- Charité – Universitätsmedizin Berlin (DE)
- University of Bonn (DE)
- Corresponding author
- Wegmann, Susanne
- ORCID
- Venue
- The EMBO Journal
- Published
- 2022-03-17
- Volume
- 41
- Issue
- 11
- Pages
- e108882-e108882
- ISSN
- 0261-4189 (ISSN-L)
- 1460-2075
- PMC
- PMC9156969
- OpenAlex
- W4221061896
- Cited by
- 106
- References
- 94
- Citations by year
- 2026: 38 · 2025: 25 · 2024: 12 · 2023: 22 · 2022: 9
- FWCI
- 5.78
- Type
- journal article
- Language
- en
- Open access
- hybrid
- doi.org
- Licence
- Locations
- The EMBO Journal (publishedVersion, cc-by-nc-nd)
- bioRxiv (Cold Spring Harbor Laboratory) (submittedVersion)
- PubMed (publishedVersion)
- PubMed Central (publishedVersion, cc-by-nc-nd)
- DZNE Pub (submittedVersion, other-oa)
- Funders
- Deutsche Forschungsgemeinschaft (402723784, EXC 2056)
- Deutsches Zentrum für Neurodegenerative Erkrankungen
- Gemeinnützige Hertie‐Stiftung
- BrightFocus Foundation
- Topics
- Life Sciences › Neuroscience › Cellular and Molecular Neuroscience › Alzheimer's disease research and treatments
- Health Sciences › Medicine › Clinical Neurology › Amyotrophic Lateral Sclerosis Research
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cell Biology › Microtubule and mitosis dynamics
- Keywords
- tau protein, biomolecular condensates, liquid-liquid phase separation, macromolecular crowding, microtubule bundling, microtubule assembly, tau aggregation, nuclear transport, fluorescence lifetime imaging, molecular packing density, neurodegenerative diseases
- MeSH terms
- Humans, Microtubules, Neurons, Protein Binding, RNA, tau Proteins, Neurodegenerative Diseases
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