PreprintCited by 5Bacterial biofilms and quorum sensingEssential Oils and Antimicrobial ActivityBioactive natural compounds

The DOI matches its Crossref record; 1 of the 1 references it cites were found in a registry or an index.

In vitro activities of isobavachalcone against planktonic and persister cells and biofilm of Enterococcus faecalis

Open access

Preprint — published as 10.1186/s12866-025-03836-5 · Paper page

Abstract

Background Mounting evidences have demonstrated the extensive pharmacological activities of the natural product isobavachalcone, including antimicrobial activity, inhibition of reverse transcriptase, antitubercular and antioxidant ability et al. However, the antibacterial and antibiofilm activity and its action mode of isobavachalcone against clinical E. faecalis isolates remain elusive. This study aims to evaluate the in vitro antibacterial and anti-biofilm activities of isobavachalcone on clinical E. faecalis isolates from China and further investigate the possible target site of isobavachalcone in E. faecalis. Results Our data suggested the MICs of isobavachalcone ranging from 6.25 to 12.5 µM against 220 E. faecalis strains. The robust inhibitory effect of isobavachalcone with sub-MIC concentration ( 1/2xMIC ) against the biofilm formation of E. faecalis was found. The rapid bactericidal effect of isobavachalcone against E. faecalis was demonstrated and more planktonic cells could be killed by isobavachalcone compared with vancomycin, linezolid, or ampicillin at 2, 4, 6, and 12h. No synergetic bactericidal activity of isobavachalcone combined with vancomycin, linezolid, or ampicillin was found. Furthermore, genetic mutation of isobavachalcone-resistant E. faecalis was compared with the parental strain by whole genome sequencing, showing that the functions of the mutated proteins were associated with the PurH and FlgJ proteins and other eight proteins involved in the cell wall or cell membrane biogenesis, DNA synthesis, and energy metabolism. Molecular docking analysis showed that FlgJ protein might serve as the potential target of isobavachalcone in E. faecalis. Other mutations are involved in the cell wall or cell membrane biogenesis, DNA synthesis, and energy metabolism. Conclusion This study discovered that isobavachalcone had an antibacterial effect on E. faecalis, and significantly inhibited the biofilm formation of E. faecalis at subinhibitory concentrations. In addition, antibacterial and antibiofilm activity against clinical E. faecalis isolates from China by targeting FlgJ protein.

Overview

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.21203/rs.3.rs-5317490/v1

Cites

1 of 1 references verified0 citation errors · 0 not checkable

Statistics

Verification

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Citations

Cites

Flagged first, then by citations

Research works printed but not linked: 37

  1. Kao PHN, Kline KA. Dr. Jekyll and Mr. Hide: How Enterococcus faecalis Subverts the Host Immune Response to Cause Infection. J Mol Biol. 2019;431(16):2932–45. · DOI
  2. Yadav J, Das S, Karthikeyan D, Chug R, Jyoti A, Srivastava VK, et al. Identification of Protein Drug Targets of Biofilm Formation and Quorum Sensing in Multidrug Resistant Enterococcus faecalis. Curr Protein Pept Sci. 2022;23(4):248–63. · DOI
  3. Leclercq R, Derlot E, Duval J, Courvalin P. Plasmid-mediated resistance to vancomycin and teicoplanin in Enterococcus faecium. N Engl J Med. 1988;319(3):157–61. · DOI
  4. Murray BE. The life and times of the Enterococcus. Clin Microbiol Rev. 1990;3(1):46–65. · DOI
  5. García-Solache M, Rice LB. The Enterococcus: a Model of Adaptability to Its Environment. Clin Microbiol Rev. 2019;32(2):e00058–18. · DOI
  6. Mercuro NJ, Davis SL, Zervos MJ, Herc ES. Combatting resistant enterococcal infections: a pharmacotherapy review. Expert Opin Pharmacother. 2018;19(9):979–92. · DOI
  7. Sandoe JAT, Witherden IR, Cove JH, Heritage J, Wilcox MH. Correlation between enterococcal biofilm formation in vitro and medical-device-related infection potential in vivo. J Med Microbiol. 2003;52(Pt 7):547–50. · DOI
  8. Rello J, Campogiani L, Eshwara VK. Understanding resistance in enterococcal infections. Intensive Care Med. 2020;46(2):353–6. · DOI
  9. Fisher RA, Gollan B, Helaine S. Persistent bacterial infections and persister cells. Nat Rev Microbiol. 2017;15(8):453–64. · DOI · Paper page
  10. Goh HMS, Yong MHA, Chong KKL, Kline KA. Model systems for the study of Enterococcal colonization and infection. Virulence. 2017;8(8):1525–62. · DOI
  11. O’Toole G, Kaplan HB, Kolter R. Biofilm formation as microbial development. Annu Rev Microbiol. 2000;54:49–79. · DOI · Paper page
  12. Defraine V, Fauvart M, Michiels J. Fighting bacterial persistence: Current and emerging anti-persister strategies and therapeutics. Drug Resist Updat Rev Comment Antimicrob Anticancer Chemother. 2018;38:12–26.
  13. Pang Z, Raudonis R, Glick BR, Lin TJ, Cheng Z. Antibiotic resistance in Pseudomonas aeruginosa: mechanisms and alternative therapeutic strategies. Biotechnol Adv. 2019;37(1):177–92. · DOI
  14. de Assis LR, Theodoro RDS, Costa MBS, Nascentes JAS, Rocha MD da, de Bessa MA et al. S,. Antibacterial Activity of Isobavachalcone (IBC) Is Associated with Membrane Disruption. Membranes. 2022;12(3):269.
  15. Cui Y, Taniguchi S, Kuroda T, Hatano T. Constituents of Psoralea corylifolia Fruits and Their Effects on Methicillin-Resistant Staphylococcus aureus. Mol Basel Switz. 2015;20(7):12500–11.
  16. Chiang CC, Cheng MJ, Peng CF, Huang HY, Chen IS. A novel dimeric coumarin analog and antimycobacterial constituents from Fatoua pilosa. Chem Biodivers. 2010;7(7):1728–36. · DOI
  17. Wang M, Lin L, Lu JJ, Chen X. Pharmacological review of isobavachalcone, a naturally occurring chalcone. Pharmacol Res. 2021;165:105483. · DOI
  18. Dzoyem JP, Hamamoto H, Ngameni B, Ngadjui BT, Sekimizu K. Antimicrobial action mechanism of flavonoids from Dorstenia species. Drug Discov Ther. 2013;7(2):66–72.
  19. Cushnie TPT, Lamb AJ. Recent advances in understanding the antibacterial properties of flavonoids. Int J Antimicrob Agents. 2011;38(2):99–107. · DOI
  20. Chen Y, Hu H, Huang F, Ling Z, Chen B, Tan B, et al. Cocktail of isobavachalcone and curcumin enhance eradication of Staphylococcus aureus biofilm from orthopedic implants by gentamicin and alleviate inflammatory osteolysis. Front Microbiol. 2022;13:958132. · DOI
  21. Zheng J, Chen Z, Lin Z, Sun X, Bai B, Xu G, et al. Radezolid Is More Effective Than Linezolid Against Planktonic Cells and Inhibits Enterococcus faecalis Biofilm Formation. Front Microbiol. 2020;11:196. · DOI
  22. Zheng J, Shang Y, Wu Y, Wu J, Chen J, Wang Z, et al. Diclazuril Inhibits Biofilm Formation and Hemolysis of Staphylococcus aureus. ACS Infect Dis. 2021;7(6):1690–701. · DOI
  23. Zheng J, Shang Y, Wu Y, Zhao Y, Chen Z, Lin Z, et al. Loratadine inhibits Staphylococcus aureus virulence and biofilm formation. iScience. 2022;25(2):103731. · DOI
  24. Liu Y, Yang X, Gan J, Chen S, Xiao ZX, Cao Y. CB-Dock2: improved protein-ligand blind docking by integrating cavity detection, docking and homologous template fitting. Nucleic Acids Res. 2022;50(W1):W159–64. · DOI
  25. Xing N, Meng X, Wang S, Isobavachalcone. A comprehensive review of its plant sources, pharmacokinetics, toxicity, pharmacological activities and related molecular mechanisms. Phytother Res PTR. 2022;36(8):3120–42. · DOI
  26. de Assis LR, Theodoro RDS, Costa MBS, Nascentes JAS, Rocha MD da, de Bessa MA et al. S,. Antibacterial Activity of Isobavachalcone (IBC) Is Associated with Membrane Disruption. Membranes [Internet]. 2022;12(3). https://pubmed.ncbi.nlm.nih.gov/35323743
  27. Sy CL, Chen PY, Cheng CW, Huang LJ, Wang CH, Chang TH, et al. Recommendations and guidelines for the treatment of infections due to multidrug resistant organisms. J Microbiol Immunol Infect Wei Mian Yu Gan Ran Za Zhi. 2022;55(3):359–86. · DOI
  28. Egan SA, Shore AC, O’Connell B, Brennan GI, Coleman DC. Linezolid resistance in Enterococcus faecium and Enterococcus faecalis from hospitalized patients in Ireland: high prevalence of the MDR genes optrA and poxtA in isolates with diverse genetic backgrounds. J Antimicrob Chemother. 2020;75(7):1704–11. · DOI
  29. Yan J, Bassler BL. Surviving as a Community: Antibiotic Tolerance and Persistence in Bacterial Biofilms. Cell Host Microbe. 2019;26(1):15–21. · DOI
  30. Defraine V, Fauvart M, Michiels J. Fighting bacterial persistence: Current and emerging anti-persister strategies and therapeutics. Drug Resist Updat Rev Comment Antimicrob Anticancer Chemother. 2018;38:12–26.
  31. Liu F, Jin P, Gong H, Sun Z, Du L, Wang D. Antibacterial and antibiofilm activities of thyme oil against foodborne multiple antibiotics-resistant Enterococcus faecalis. Poult Sci. 2020;99(10):5127–36. · DOI
  32. Liu X, Xiong Y, Shi Y, Deng X, Deng Q, Liu Y, et al. In vitro activities of licochalcone A against planktonic cells and biofilm of Enterococcus faecalis. Front Microbiol. 2022;13:970901. · DOI
  33. Harms A, Maisonneuve E, Gerdes K. Mechanisms of bacterial persistence during stress and antibiotic exposure. Science [Internet]. 2016;354(6318). https://pubmed.ncbi.nlm.nih.gov/27980159
  34. Smith JR, Barber KE, Raut A, Rybak MJ. β-Lactams enhance daptomycin activity against vancomycin-resistant Enterococcus faecalis and Enterococcus faecium in in vitro pharmacokinetic/pharmacodynamic models. Antimicrob Agents Chemother. 2015;59(5):2842–8. · DOI
  35. Barber KE, Shammout Z, Smith JR, Kebriaei R, Morrisette T, Rybak MJ. Biofilm Time-Kill Curves to Assess the Bactericidal Activity of Daptomycin Combinations against Biofilm-Producing Vancomycin-Resistant Enterococcus faecium and faecalis. Antibiot Basel Switz. 2021;10(8):897.
  36. Mathur H, Field D, Rea MC, Cotter PD, Hill C, Ross RP. Fighting biofilms with lantibiotics and other groups of bacteriocins. NPJ Biofilms Microbiomes. 2018;4:9. · DOI
  37. Suleyman G, Zervos MJ. Safety and efficacy of commonly used antimicrobial agents in the treatment of enterococcal infections: a review. Expert Opin Drug Saf. 2016;15(2):153–67. · DOI

Metadata

Authors
Ouyang, L., Xu, Z., Tang, Y., Li, D., Yu, Z., Wen, Z., Zhang, H., & Zhang, C.
Affiliations
  • Shenzhen University (CN)
  • Shenzhen University Medical School
Corresponding author
  • Wen, Zewen
  • Zhang, Haigang
  • Zhang, Chaoqin
Venue
BMC Microbiology
Published
2024-11-06
Volume
25
Issue
1
Pages
105-105
ISSN
1471-2180 (ISSN-L)
OpenAlex
W4408033643
Cited by
5
References
1
Citations by year
2026: 3 · 2025: 2
FWCI
1.50
Type
journal article
Language
en
Open access
Locations
  • BMC Microbiology (publishedVersion, cc-by-nc-nd)
  • Research Square (acceptedVersion, cc-by)
  • PubMed Central (publishedVersion, cc-by-nc-nd)
  • PubMed (publishedVersion)
  • DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion)
Funders
  • National Natural Science Foundation of China (82172283, 2022A1515110096)
  • Shenzhen University
  • Science, Technology and Innovation Commission of Shenzhen Municipality (JCYJ20220530141614034, JCYJ20220530141810023, JCYJ20220530142006015)
  • Sanming Project of Medicine in Shenzhen (SMGC202305029)
  • Basic and Applied Basic Research Foundation of Guangdong Province (2024A1515013276, 2022A1515110096)
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Bacterial biofilms and quorum sensing
  • Life Sciences › Agricultural and Biological Sciences › Food Science › Essential Oils and Antimicrobial Activity
  • Life Sciences › Pharmacology, Toxicology and Pharmaceutics › Drug Discovery › Bioactive natural compounds
Keywords
isobavachalcone, Enterococcus faecalis, antibacterial activity, antibiofilm activity, biofilm inhibition, minimum inhibitory concentration, vancomycin resistance, ampicillin resistance, drug resistance mechanisms, molecular docking, clinical isolates, flavonoids
MeSH terms
Anti-Bacterial Agents, Bacterial Proteins, China, Humans, Microbial Sensitivity Tests, Enterococcus faecalis, Vancomycin, Gram-Positive Bacterial Infections, Biofilms, Chalcones, Molecular Docking Simulation

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review