Carbon Mineralogy and Crystal Chemistry
Open accessAbstract
Carbon, element 6, displays remarkable chemical flexibility and thus is unique in the diversity of its mineralogical roles. Carbon has the ability to bond to itself and to more than 80 other elements in a variety of bonding topologies, most commonly in 2-, 3-, and 4-coordination. With oxidation numbers ranging from −4 to +4, carbon is observed to behave as a cation, as an anion, and as a neutral species in phases with an astonishing range of crystal structures, chemical bonding, and physical and chemical properties. This versatile element concentrates in dozens of different Earth repositories, from the atmosphere and oceans to the crust, mantle, and core, including solids, liquids, and gases as both a major and trace element (Holland 1984; Berner 2004; Hazen et al. 2012). Therefore, any comprehensive survey of carbon in Earth must consider the broad range of carbon-bearing phases. / The objective of this chapter is to review the mineralogy and crystal chemistry of carbon, with a focus primarily on phases in which carbon is an essential element: most notably the polymorphs of carbon, the carbides, and the carbonates. The possible role of trace carbon in nominally acarbonaceous silicates and oxides, though potentially a large and undocumented reservoir of the mantle and core (Wood 1993; Jana and Walker 1997; Freund et al. 2001; McDonough 2003; Keppler et al. 2003; Shcheka et al. 2006; Dasgupta 2013; Ni and Keppler 2013; Wood et al. 2013), is not considered here. Non-mineralogical carbon-bearing phases treated elsewhere, including in this volume, include C-O-H-N aqueous fluids (Javoy 1997; Zhang and Duan 2009; Jones et al. 2013; Manning et al. 2013); silicate melts (Dasgupta et al. 2007; Dasgupta 2013; Manning et al. 2013); carbonate melts (Cox 1980; Kramers et al. 1981; Wilson and Head 2007; Walter et al. 2008; Jones et al. 2013); a rich variety of organic molecules, including methane and higher hydrocarbons (McCollom and Simoneit 1999; Kenney et al. 2001; Kutcherov et al. 2002; Sherwood-Lollar et al. 2002; Scott et al. 2004; Helgeson et al. 2009; McCollom 2013; Sephton and Hazen 2013); and subsurface microbial life (Parkes et al. 1993; Gold 1999; Chapelle et al. 2002; D’Hondt et al. 2004; Roussel et al. 2008; Colwell and D’Hondt 2013; Schrenk et al. 2013; Meersman et al. 2013; Anderson et al. 2013). / The International Mineralogical Association (IMA) recognizes more than 380 carbon-bearing minerals (http://rruff.info/ima/), including carbon polymorphs, carbides, carbonates, and a variety of minerals that incorporate organic carbon in the form of molecular crystals, organic anions, or clathrates. This chapter reviews systematically carbon mineralogy and crystal chemistry, with a focus on those phases most likely to play a role in the crust. Additional high-temperature and high-pressure carbon-bearing minerals that may play a role in the mantle and core are considered in the next chapter on deep carbon mineralogy (Oganov et al. 2013).
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Cites
Taking advantage of disorder: amorphous calcium carbonate and its roles in biomineralization
Addadi, L., Raz, S., & Weiner, S. (2003) · Advanced Materials · doi:10.1002/adma.200300381 · Cited by 1,594 · see citing works
Control of Aragonite or Calcite Polymorphism by Mollusk Shell Macromolecules
Falini, G., Albeck, S., Weiner, S., & Addadi, L. (1996) · Science · doi:10.1126/science.271.5245.67 · Cited by 1,437 · see citing works
Before enzymes and templates: theory of surface metabolism
Wächtershäuser, G. (1988) · Microbiological Reviews · doi:10.1128/mmbr.52.4.452-484.1988 · Cited by 1,242 · see citing works
Klein, C. (2005) · American Mineralogist · doi:10.2138/am.2005.1871 · Cited by 969 · see citing works
Stanley, S. M., & Hardie, L. A. (1998) · Palaeogeography, Palaeoclimatology, Palaeoecology · doi:10.1016/s0031-0182(98)00109-6 · Cited by 830 · see citing works
Hazen, R. M., Papineau, D., Bleeker, W., Downs, R. T., Ferry, J. M., McCoy, T. J., Sverjensky, D. A., & Yang, H. (2008) · American Mineralogist · doi:10.2138/am.2008.2955 · Cited by 701 · see citing works
Self-citationThermodynamics of Calcite Growth: Baseline for Understanding Biomineral Formation
Teng, H. H., Dove, P. M., Orme, C. A., & De Yoreo, J. J. (1998) · Science · doi:10.1126/science.282.5389.724 · Cited by 490 · see citing works
Serpentinization, carbon, and deep life
Schrenk, M. O., Brazelton, W. J., & Lang, S. Q. (2013) · Reviews in Mineralogy and Geochemistry · doi:10.2138/rmg.2013.75.18 · Cited by 470 · see citing works
Laboratory Simulations of Abiotic Hydrocarbon Formation in Earth's Deep Subsurface
McCollom, T. M. (2013) · Reviews in Mineralogy and Geochemistry · doi:10.2138/rmg.2013.75.15 · Cited by 285 · cited 1× · see citing works
“Characterization of such phases may prove especially important in resolving debates regarding abiotic versus biotic origins of some deep organic molecules (Sephton and Hazen 2013; McCollom 2013).”
BackgroundIsotope Fractionation and Atmospheric Oxygen: Implications for Phanerozoic O <sub>2</sub> Evolution
Berner, R. A., Petsch, S. T., Lake, J. A., Beerling, D. J., Popp, B. N., Lane, R. S., Laws, E. A., Westley, M. B., Cassar, N., Woodward, F. I., et al. (2000) · Science · doi:10.1126/science.287.5458.1630 · Cited by 227 · see citing works
Pasek, M. A., Dworkin, J. P., & Lauretta, D. S. (2007) · Geochimica et Cosmochimica Acta · doi:10.1016/j.gca.2006.12.018 · Cited by 143 · see citing works
Flagged first, then by citations
Research works printed but not linked: 69
- Alexander CMO'D (1990) In situ measurement of interstellar silicon carbide in two CM chondrite meteorites. Nature 348:715-717, doi:10.1038/348715a0 · DOI
- Bathurst RGC (1976) Carbonate Sediments and their Diagenesis (Developments in Sedimentology 12). Elsevier, New York
- Bebié J, Schoonen MAA (2000) Pyrite surface interaction with selected organic aqueous species under anoxic conditions. Geochem Trans 1:47, doi: 10.1186/1467-4866-1-47 · DOI
- Bergman SC (1987) Lamproites and other potassium-rich igneous rocks: a review of their occurrences, mineralogy, and geochemistry. In: Alkaline Igneous Rocks. Fitton JG, Upton BJG (eds) Geol Soc London Spec Publ 30:103-119
- Bernal JD (1951) The Physical Basis of Life. Routledge and Kegan Paul, London
- Berner EK, Berner RA (2012) Global Environment: Water, Air and Geochemical Cycles. Princeton University Press, Princeton, New Jersey
- Berner RA (2004) The Phanerozoic Carbon Cycle. Oxford University Press, Oxford, UK
- Bhatnagar M, Baliga BJ (1993) Comparison of 6H-SiC, 3C-SiC, and Si for power devices. IEEE Trans Electron Devices 40:645-655, doi:10.1109/16.199372 · DOI
- Boswell R (2009) Is gas hydrate energy within reach? Science 325:957-958, doi: 10.1126/science.1175074 · DOI
- Bragg WL, Claringbull GF, Taylor WH (1965) Crystal Structures of Minerals. Cornell University Press, Ithaca, New York
- Bundy FP (1967) Hexagonal diamond-a new form of carbon. J Chem Phys 46:3437-3446, doi: 10.1063/1.1841236 · DOI
- Byrne S, Ingersoll AP (2003) A sublimation model for Martian south polar ice features. Science 299:1051- 1053, doi: 10.1126/science.1080148 · DOI
- Cairns-Smith AG (1982) Genetic Takeover and the Mineral Origins of Life. Cambridge University Press, Cambridge, UK
- Cairns-Smith AG, Hartman H (1986) Clay Minerals and the Origin of Life. Cambridge University Press, Cambridge, UK
- Carmody, L. (2012) Geochemical characteristics of carbonatite-related volcanism and sub-volcanic metasomatism at Oldoinyo Lengai, Tanzania. PhD Dissertation, University College London, UK
- Chang LLY, Howie RA, Zussman J (1997) Rock-Forming Minerals. Volume 5B, 2nd Edition. Non-Silicates: Sulphates, Carbonates, Phosphates, Halides. Longman Group, Essex, UK
- Cowlard FC, Lewis JC (1967) Vitreous carbon-a new form of carbon. J Mater Sci 2:507-512, doi: 10.1007/ BF00752216 · DOI
- D'Hondt S, Jørgensen BB, Miller DJ, Batzke A, Blake R, Cragg BA, Cypionka H, Dickens GR, Ferdelman T, Hinrichs K-U, Holm NG, Mitterer R, Spivack A, Wang G, Bekins B, Engelen B, Ford K, Gettemy G, Rutherford SD, Sass H, Skilbeck CG, Aiello IW, Guèrin G, House CH, Inagaki F, Meister P, Naehr T, Niitsuma S, Parkes RJ, Schippers A, Smith DC, Teske A, Wiegel J, Naranjo Padilla C, Solis Acosta JL (2004) Distributions of microbial activities in deep subseafloor sediments. Science 306:2216-2221, doi: 10.1126/ science.1101155 · DOI · Paper page
- Dana ES (1958) A Textbook of Mineralogy, 4 th edition. John Wiley & Sons, New York
- Dasgupta R, Hirschmann MM, Smith ND (2007) Water follows carbon: CO 2 incites deep silicate melting and dehydration beneath midocean ridges. Geology 35:135-138, doi: 10.1130/G22856A. · DOI
- Deer WA, Howie RA, Zussman J (1966) An Introduction to Rock-Forming Minerals. John Wiley & Sons, New York
- El Goresy A, Donnay G (1968) A new allotropic form of carbon from the Ries crater. Science 161:363-364, doi: 10.1126/science.161.3839.363 · DOI
- Ettmayer P, Lengauer W (1994) Carbides: transition metal solid state chemistry. In: Encyclopedia of Inorganic Chemistry. King RB (ed) John Wiley & Sons, New York
- Field JE (ed) (1979) The Properties of Diamond. Academic Press, New York
- Frondel C, Marvin UB (1967) Lonsdaleite, a hexagonal polymorph of diamond. Nature 214:587-589, doi: 10.1038/214587a0 · DOI
- Geim AK (2009) Graphene: status and prospects. Science 234:1530-1534, doi: 10.1126/science.1158877 · DOI · Paper page
- Glein C (2012) Theoretical and experimental studies of cryogenic and hydrothermal organic geochemistry. PhD Dissertation, Arizona State University, Tempe, Arizona Gold T (1999) The Deep Hot Biosphere. Copernicus, New York
- Grew ES, Bada JL, Hazen RM (2011) Borate minerals and origin of the RNA world. Origins Life Evol Biospheres 41:307-316, doi 10.1007/s11084-101-9233-y · DOI
- Guggenheim S, Koster van Groos AF (2003) New gas-hydrate phase: synthesis and stability of clay-methane hydrate intercalate. Geology 31:653-656, doi:10.1130/0091-7613(2003)031<0653:NGPSAS>2.0.CO;2 · DOI
- Harlow GE (ed) (1998) The Nature of Diamonds. Cambridge University Press, New York
- Hatano M, Ohsaki T, Arakawa K (1985) Graphite whiskers by new process and their composites, advancing technology in materials and processes. Science of Advanced Materials and Processes, National SAMPE Symposium 30:1467-1476
- Hazen RM (1999) The Diamond Makers. Cambridge University Press, New York
- Hazen RM (2005) Genesis: The Scientific Quest for Life's Origin. Joseph Henry Press, Washington, DC
- Holland HD (1984) The Chemical Evolution of the Oceans and Atmosphere. Princeton University Press, Princeton, New Jersey
- Javoy M (1997) The major volatile elements of the Earth: their origin, behavior, and fate. Geophys Res Lett 24:177-180, doi: 10.1029/96GL03931 · DOI
- Klein C, Hurlbut CS Jr (1993) Manual of Mineralogy, 21 st edition. Wiley, New York
- Koh CA, Sum AK, Sloan ED (2009) Gas hydrates: unlocking the energy from icy cages. J Appl Phys 106:061101, doi: 10.1063/1.3216463 · DOI
- Kvenvolden KA (1995) A review of the geochemistry of methane in natural gas hydrate. Org Geochem 23:997- 1008
- Lahav N (1999) Biogenesis: Theories of Life's Origin. Oxford University Press, New York
- Madar R (2004) Materials science: silicon carbide in contention. Nature 430:974-975 doi: 10.1038/430974a. · DOI
- McCollom TM, Simoneit BR (1999) Abiotic formation of hydrocarbons and oxygenated compounds during thermal decomposition of iron oxalate. Origins Life Evol Biosphere 29:167-186, doi: 10.1023/A:1006556315895 · DOI
- Megaw HD (1973) Crystal Structures: A Working Approach. Saunders, Philadelphia
- Mellor JW (1924) Chapter 39: Carbon. In: A Comprehensive Treatise on Inorganic and Theoretical Chemistry. Longmans, London, p 710-771
- Mikhail S (2011) Stable isotope fractionation during diamond growth and the Earth's deep carbon cycle. Ph.D thesis. University College London, UK
- Milkov AV (2004) Global estimates of hydrate-bound gas in marine sediments: how much is really out there? Earth Sci Rev 66:183-197, doi:10.1016/j.earscirev.2003.11.002 · DOI
- Mills SJ, Hatert F, Nickel EH, Ferraris G (2009) The standardisation of mineral group hierarchies: application to recent nomenclature proposals. Eur J Mineral 21:1073-1080, doi: 10.1127/0935-1221/2009/0021-1994 · DOI
- Morgan P (2005) Carbon Fibers and their Composites. CRC Press, Boca Raton, Florida
- Morse JW, Mackenzie FT (1990) Geochemistry of Sedimentary Carbonates. Elsevier, Amsterdam
- Mugnaioli E, Andrusenko I, Schüler T, Loges N, Dinnebier RE, Panthöfer M, Tremel W, Kolb U (2012) Ab- initio structure determination of vaterite by automated electron diffraction. Angew Chem 124:7148-7152, doi: 10.1002/anie.200123456 · DOI
- Pan Z, Sun H, Zhang Y, Chen C (2009) Harder than diamond: superior indentation strength of wurtzite BN and lonsdaleite. Phys Rev Lett 102:055503, doi: 10.1103/PhysRevLett.102.055503 · DOI
- Pandey D, Krishna P (1978) Advances in Crystallography Oxford and IBH, New Delhi, India
- Pearson DG, Canil D, Shirey SB (2007) Mantle samples included in volcanic rocks: xenoliths and diamonds. In: Treatise on Geochemistry. Vol. 2. Mantle and Core. Carlson RW (ed) Elsevier, Oxford, UK, p 171-275
- Robinson PT, Malpas J, Cameron S, Zhou MF, Bai WJ (2001) An ultrahigh presure mineral assemblage from the Luobusa Ophiolite, Tibet. Eleventh Annual V. M. Goldschmidt Conference, Abstract 3138
- Rode AV, Gamaly EG, Luther-Davies B (2000) Formation of cluster-assembled carbon nanofoam by high- repetition-rate laser ablation. Appl Phys A Mater Sci Process A70:135-144, doi: 10.1007/s003390050025 · DOI
- Roussel EG, Cambon Bonavita M-A, Querellou J, Cragg BA, Webster G, Prieur D, Parkes RJ (2008) Extending the sub-sea-floor biosphere. Science 320:1046, doi: 10.1126/ science.1154545 · DOI
- Sano N, Wang H, Chhowalla M, Alexandrou I, Amaratunga GAJ (2001) Synthesis of carbon 'onions' in water. Nature 414:506-507, doi: 10.1038/35107141 · DOI
- Scott HP, Hemley RJ, Mao HK, Hershbach DR, Fried LE, Howard WM, Bastea S (2004) Generation of methane in Earth's mantle: in situ high pressure-temperature measurements of carbon reduction. Proc Natl Acad Sci USA 101:14023-14026, doi: 10.1073/pnas.0405930101 · DOI
- Shirey SB, Cartigny P, Frost DJ, Keshav S, Nestola F, Nimis P, Pearson DG, Sobolev NV, Walter MJ (2013) Diamonds and the geology of mantle carbon. Rev Mineral Geochem 75:355-421
- Shirey SB, Richardson SH (2011) Start of the Wilson cycle at 3 Ga shown by diamonds from the subcontinental mantle. Science 333:434-436, doi: 10.1126/science.1206275 · DOI · Paper page
- Spear KE, Dismukes JP (ed) (1994) Synthetic Diamonds: Emerging CVD Science and Technology. Wiley, New York
- Suits GG (1960) The Synthesis of Diamonds-A Case History in Modern Science. General Electric, Schenectady, New York Suits GG (1965) Speaking of Research. Wiley, New York
- Tran NT, Min T, Franz AK (2011) Silanediol hydrogen bonding activation of carbonyl compounds. Chemistry Eur J 17:9897-9900, doi: 10.1002/chem.201101492 · DOI
- Tuttle OF, Gittins J (ed) (1966) Carbonatites. Wiley Interscience, New York
- Verma AR, Krishna P (1966) Polymorphism and Polytypism in Crystals. Wiley, New York
- Walter MJ, Kohn SC, Araujo D, Bulanova GP, Smith CB, Gaillou E, Wang J, Steele A, Shirey SB (2011) Deep mantle cycling of oceanic crust: evidence from diamonds and their mineral inclusions. Science 334:54- 57, doi: 10.1126/science.1209300 · DOI
- Wood BJ (1993) Carbon in the core. Earth Planet Sci Lett 117:593-607, doi: 10.1016/ 0012-821X(93)90105-I · DOI
- Xu J, Mao H-K (2000) Moissanite: A window for high-pressure experiments. Science 290:783-787, doi: 10.1126/science.290.5492.783 · DOI
- Zaitsev AM (2001) Optical Properties of Diamond. Springer, Berlin
- Zhang C, Duan ZH (2009) A model for C-O-H fluid in the Earth's mantle. Geochim Cosmochim Acta 73:2089- 2102, doi: 10.1016/j.gca.2009.01.021 · DOI
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Sorted by citations
Comprehensive Density Functional Theory Studies of Vibrational Spectra of Carbonates
Zhuravlev, Y. N., & Atuchin, V. V. (2020) · Nanomaterials · doi:10.3390/nano10112275 · Cited by 65 · see citing works
“Natural carbonates are composed of over 60 minerals [2].”
BackgroundStructures and Crystal Chemistry of Carbonate at Earth's Mantle Conditions
Merlini, M., Milani, S., & Maurice, J. (2020) · Geophysical Monograph Series · doi:10.1002/9781119508229.ch9 · Cited by 7 · see citing works
“At surface conditions, the most important and ubiquitous carbonate minerals are calcite, aragonite (CaCO 3 ), and dolomite, CaMg(CO 3 ) 2 (Hazen, Downs, et al., 2013).”
BackgroundInfluential
- Authors
- Hazen, R. M., Downs, R. T., Jones, A. P., & Kah, L.
- Affiliations
- Carnegie Institution for Science (US)
- University of Arizona (US)
- University College London (GB)
- University of Tennessee at Knoxville (US)
- Corresponding author
- Hazen, R. M.
- Downs, R. T.
- Jones, A. P.
- Kah, L.
- Venue
- Reviews in Mineralogy and Geochemistry
- Publisher
- Mineralogical Society of America
- Published
- 2013-01-01
- Volume
- 75
- Issue
- 1
- Pages
- 7-46
- ISSN
- 1529-6466 (ISSN-L)
- OpenAlex
- W2113755490
- Cited by
- 114
- References
- 11
- Citations by year
- 2026: 6 · 2025: 8 · 2024: 9 · 2023: 9 · 2022: 5 · 2021: 7 · 2020: 11 · 2019: 8 · 2018: 10 · 2017: 7 · 2016: 8 · 2015: 9 · 2014: 6 · 2013: 11
- FWCI
- 11.27
- Type
- journal article
- Language
- en
- Open access
- green
- discovery.ucl.ac.uk
- Locations
- Reviews in Mineralogy and Geochemistry (publishedVersion)
- UCL Discovery (University College London) (submittedVersion)
- Funders
- Alfred P. Sloan Foundation
- Carnegie Institution of Washington
- NASA Astrobiology Institute
- Topics
- Physical Sciences › Earth and Planetary Sciences › Geophysics › High-pressure geophysics and materials
- Physical Sciences › Earth and Planetary Sciences › Geochemistry and Petrology › Mineralogy and Gemology Studies
- Physical Sciences › Earth and Planetary Sciences › Geophysics › Geological and Geochemical Analysis
- Keywords
- carbon polymorphs, carbides, carbonates, carbon oxidation state, coordination number
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