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Terminator Oligo Blocking Efficiently Eliminates rRNA from Drosophila Small RNA Sequencing Libraries
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“Complementary DNA oligos bearing this modification have been previously shown to prevent 5′ adapter ligation to Drosophila 2S rRNA in smRNA-seq libraries (11).”
From Depletion of erythropoietic miR-486-5p and miR-451a improves detectability of rare microRNAs in peripheral blood-derived small RNA sequencing libraries (2020) · cites this paper as [11]
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Research works printed but not linked: 10
- 10.1038/nmeth.2483 · DOI
- 10.1371/journal.pone.0042882 · DOI
- 10.1371/journal.pone.0027288 · DOI
- 10.1093/nar/gkr617 · DOI
- 10.1038/nbt.2282 · DOI · Paper page
- 10.1093/nar/gkr547 · DOI
- 10.1155/2012/360358 · DOI
- 10.1016/j.cell.2009.04.027 · DOI
- 10.1016/j.cub.2007.12.049 · DOI · Paper page
- Vigneault, F., D.Ter-Ovanesyan, S.Alon, S.Eminaga, D.C.Christodoulou, J.G.Seidman, E.Eisenberg, and G.M.Church. 2012. High-throughput multiplex sequencing of miRNA. Curr Protoc Hum Genet.Chapter 11:11–10Unit 11 12.
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Sun, W., Samimi, H., Gamez, M., Zare, H., & Frost, B. (2018) · Nature Neuroscience · doi:10.1038/s41593-018-0194-1 · Cited by 300
A somatic piRNA pathway in the Drosophila fat body ensures metabolic homeostasis and normal lifespan
Jones, B. C., Wood, J. G., Chang, C., Tam, A. D., Franklin, M. J., Siegel, E. R., & Helfand, S. L. (2016) · Nature Communications · doi:10.1038/ncomms13856 · Cited by 130
Juzenas, S., Lindqvist, C. M., Ito, G., Dolshanskaya, Y., Halfvarson, J., Franke, A., & Hemmrich-Stanisak, G. (2020) · NAR Genomics and Bioinformatics · doi:10.1093/nargab/lqaa008 · Cited by 17
Metadata
- Authors
- Wickersheim, M. L., & Blumenstiel, J. P.
- Affiliations
- Department of Ecology and Evolutionary Biology,University of Kansas, Lawrence, KS
- Venue
- BioTechniques
- Publisher
- Informa UK Limited
- Published
- 2013-11
- Volume
- 55
- Issue
- 5
- Pages
- 269-272
- ISSN
- 0736-6205
- 1940-9818
- PMC
- PMC4077022
- Cited by
- 59
- References
- 0
- Language
- en
- Funders
- NSF Award (MCB-1022165 and NIH P20GM103638)
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- CoChat. (2026). Citation check: Terminator Oligo Blocking Efficiently Eliminates rRNA from Drosophila Small RNA Sequencing Libraries. https://app.cochat.ai/papers/10.2144/000114102
- The paper
- Wickersheim, M. L., & Blumenstiel, J. P. (2013). Terminator Oligo Blocking Efficiently Eliminates rRNA from Drosophila Small RNA Sequencing Libraries. BioTechniques. https://doi.org/10.2144/000114102
