The DOI matches its Crossref record; 50 of the 52 references it cites were found in a registry or an index.
Genetic Variation in Pneumocystis carinii Isolates from Different Geographic Regions: Implications for Transmission
Open accessAbstract
To study transmission patterns of Pneumocystis carinii pneumonia (PCP) in persons with AIDS, we evaluated P. carinii isolates from patients in five U.S. cities for variation at two independent genetic loci, the mitochondrial large subunit rRNA and dihydropteroate synthase. Fourteen unique multilocus genotypes were observed in 191 isolates that were examined at both loci. Mixed infections, accounting for 17.8% of cases, were associated with primary PCP. Genotype frequency distribution patterns varied by patients' place of diagnosis but not by place of birth. Genetic variation at the two loci suggests three probable characteristics of transmission: that most cases of PCP do not result from infections acquired early in life, that infections are actively acquired from a relatively common source (humans or the environment), and that humans, while not necessarily involved in direct infection of other humans, are nevertheless important in the transmission cycle of P. carinii f. sp. hominis.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
The source backs part of the claim, not all of it — or backs it for a different population, condition or comparison.
In the citing paper
“The presence of DHPS mutations in patients without prior TMP-SMX or dapsone use for PCP prophylaxis, the absence of similar mutations in Pneumocystis isolated from other mammalian species, and the impact of geography on DHPS genotype have substantial implications for disease transmission (i.e., person-to-person transmission) that are beyond the scope of this review (32–35).”
From Dihydropteroate Synthase Gene Mutations in Pneumocystis and Sulfa Resistance (2004) · cites this paper as [32]
Experimental — accuracy not yet measured
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
Palella, F. J., Delaney, K. M., Moorman, A. C., Loveless, M. O., Fuhrer, J., Satten, G. A., Aschman, D. J., & Holmberg, S. D. (1998) · New England Journal of Medicine · doi:10.1056/nejm199803263381301 · Cited by 9,393
Simon, C. M., Frati, F., Beckenbach, A. T., Crespi, B., Liu, H., & Flook, P. K. (1994) · Annals of the Entomological Society of America · doi:10.1093/aesa/87.6.651 · Cited by 6,119
Principles of Population Genetics.
Cormack, R. M., Hartl, D. L., & Clark, A. G. (1990) · Biometrics · doi:10.2307/2531471 · Cited by 5,283
Detection of Pneumocystis carinii with DNA amplification
Wakefield, A. E., Pixley, F. J., Banerji, S., Sinclair, K., Moxon, E. R., Miller, R. F., & Hopkin, J. M. (1990) · The Lancet · doi:10.1016/0140-6736(90)92008-6 · Cited by 424
[Detection of Pneumocystis carinii with DNA amplification].
Kitada, K., & Nakamura, Y. (1992) · PubMed · Cited by 393
Brooks, D. R., Wang, P., Read, M., Watkins, W. M., Sims, P. F. G., & Hyde, J. E. (1994) · European Journal of Biochemistry · doi:10.1111/j.1432-1033.1994.00397.x · Cited by 369
PNEUMOCYSTIS CARINII PNEUMONIA
Botella, F. G., Jv, B. M., Gómez, M. L., Sempere, G., Escarti, R. M., & Fuster, M. J. G. (1964) · The Medical Journal of Australia · doi:10.5694/j.1326-5377.1964.tb109524.x · Cited by 312
Crystal structure of the anti-bacterial sulfonamide drug target dihydropteroate synthase
Achari, A., Somers, D. 0., Champness, J. N., Bryant, P. K., Rosemond, J., & STAMMERS, D. K. (1997) · Nature Structural Biology · doi:10.1038/nsb0697-490 · Cited by 297
Helweg-Larsen, J., Benfield, T. L., Eugen-Olsen, J., Lundgren, J. D., & Lundgren, B. (1999) · The Lancet · doi:10.1016/s0140-6736(99)03320-6 · Cited by 274
Natural Mode of Acquisition for de Novo Infection with Pneumocystis carinii
Hughes, W. T. (1982) · The Journal of Infectious Diseases · doi:10.1093/infdis/145.6.842 · Cited by 234
Flagged first, then by citations
2 of the 52 references couldn’t be matched to a known paper.
Research works printed but not linked: 2
- Centers for Disease Control and Prevention, 1997, HIV AIDS Surveill Rep, 9, 17
- Hughes WT. Natural habitat and mode of transmission. In: Pneumocystis carinii pneumonitis. Vol I. Boca Raton (FL): CRC Press; 1987. p. 97-105.
Cited by
Sorted by citations
Items 201–241 of 241
Ahn, A., Chang, J., Sung, H., & Kim, M. (2016) · Laboratory Medicine Online · doi:10.3343/lmo.2016.6.4.250 · Cited by 2
Lobetti, R. G. (2013) · Elsevier eBooks · doi:10.1016/b978-1-4377-0795-3.00071-5 · Cited by 2
Bonnet, P. L., Gal, S. L., Gautier, C., Hoffmann, C. V., Nan, N. L., Happe, A., Berre, R. L., Saraux, A., & Nevez, G. (2022) · Antimicrobial Agents and Chemotherapy · doi:10.1128/aac.00990-22 · Cited by 1
Cushion, M. T. (2015) · ASM Press eBooks · doi:10.1128/9781555817381.ch118 · Cited by 2
Cushion, M. T. (2011) · doi:10.1128/9781555816728.ch116 · Cited by 2
Multi-site screening for Pneumocystis jirovecii in lung cancer: possible tumour tissue colonization
Szydłowicz, M., Zajączkowska, Ż., Chabowski, M., Nowicki, M., Łukianowski, B., Gajdzis, P., Kváč, M., Calderón, E. J., Gal, S. L., & Kicia, M. (2026) · Frontiers in Cellular and Infection Microbiology · doi:10.3389/fcimb.2026.1755638 · Cited by 1
(2012) · The Internet Journal of Pulmonary Medicine · doi:10.5580/2ca7 · Cited by 1
Lobetti, R. G., & Sykes, J. E. (2021) · Elsevier eBooks · doi:10.1016/b978-0-323-50934-3.00089-6 · Cited by 1
Opportunistic Infections in Persons With Idiopathic CD4 Lymphocytopenia
Jagadeesh, S., Asnani, B., & Nieman, R. E. (2008) · Infectious Diseases in Clinical Practice · doi:10.1097/ipc.0b013e31816fd577 · Cited by 1
Ergüden, C., Delıbaş, S. B., Alpaydın, A. Ö., Sayıner, A. A., & Özkoç, S. (2021) · Medical Mycology · doi:10.1093/mmy/myab004 · Cited by 1
Pneumocystis jirovecii genetic diversity in a Spanish tertiary hospital
Goterris, L., Pasic, L., Guerrero-Murillo, M., Kan, A., Antón, A., Ruíz-Camps, I., Meyer, W., & Martín-Gómez, M. T. (2021) · Medical Mycology · doi:10.1093/mmy/myab065 · Cited by 1
Smulian, A. G., & Cushion, M. T. (2014) · ASM Press eBooks · doi:10.1128/9781555815776.ch25 · Cited by 1
Álvarez-Martínez, M. J., Camacho, A. M., Miró, J. M., Valls, M. E., & Meshnick, S. R. (2009) · Diagnostic Microbiology and Infectious Disease · doi:10.1016/j.diagmicrobio.2009.01.016 · Cited by 1
La pneumocystose est-elle une maladie contagieuse ?
Rabodonirina, M. (2001) · La Lettre de l'infectiologue · Cited by 1
Pneumocystis — A Genus Long Known, But with Relationships Only Recently Appreciated
Stringer, J. R., & Walzer, P. D. (2004) · Springer eBooks · doi:10.1007/978-3-662-10380-7_9 · Cited by 1
Self-citationCushion, M. T. (2010) · Wiley eBooks · doi:10.1002/9780470688618.taw0164 · Cited by 1
Optimisation du traitement préventif et curatif de la mucormycose pulmonaire
Brunet, K. (2020) · theses.fr (ABES) · doi:10.70675/1367c1e7zd412z4f2ez9be3zb15a2d64bb30 · Cited by 1
Robberts, F. J. L. (2005) · SUNScholar (Stellenbosch University) · Cited by 1
Pneumocystis carinii y neumocistosis
Cermeño-Vivas, J. J. (2002) · Vitae: Academia Biomédica Digital · Cited by 1
Rangel, T., & de Jesús, R. (2011) · El Repositorio Academico Digital de la UANL (Universidad Autónoma de Nuevo León)
Genetic and antigenic diversity in Pneumocystis jirovecii
Beser, J. (2011) · Figshare
Martínez, M. J. Á. (2008) · Tesis Doctorals en Xarxa (Consorci de Serveis Universitaris de Catalunya)
Neumonía por Pneumocystis carinii en niños infectados por el virus de inmunodeficiencia humana (VIH)
Morales-Aguirre, J. J., Villalobos-Acosta, C. P., Salas, V. H. L., Solís-Ortega, A. M., Gómez-Barreto, D., & Cashat-Cruz, M. (2004) · Gaceta Médica de México
Morio, F. (2014) · Journal des Anti-infectieux · doi:10.1016/j.antinf.2014.03.001
Persistent Fever and Cough With Nonspecific Lower Lung Lobe Consolidation
Brant, J. M., & Shuey, K. M. (2003) · Clinical journal of oncology nursing · doi:10.1188/03.cjon.463-466
Fernandes, C. B. (2013) · Portuguese National Funding Agency for Science, Research and Technology (RCAAP Project by FCT)
Álvarez, M. J., Miró, J. M., Moreno, A., & Meshnick, S. (2005) · Medicina Clínica · doi:10.1157/13070426
Drug Resistance in Pneumocystis jirovecii
Helweg‐Larsen, J., Benfield, T., Kovacs, J. A., & Masur, H. (2009) · Humana Press eBooks · doi:10.1007/978-1-60327-595-8_22
Dihydropteroate Synthase Gene Mutations in Pneumocystis and
Resistance, S., Huang, L., Crothers, K. A., Atzori, C., Benfield, T., Miller, R. F., Rabodonirina, M., & Helweg‐Larsen, J. (2004)
Self-citationOportunistlikud infektsioonid II
Adojaan, A., & Masso, M. (2014) · Ajakirjad. Journals by UT · doi:10.15157/ea.v0i0.9444
A Diagnostic Approach toPneumocystis jiroveciPneumonia
Orenstein, A., & Masur, H. (2007) · Infectious disease and therapy · doi:10.3109/9781420017182.011
Genotyping Pneumocystis jirovecii: Impacting Our Understanding of Interhuman Transmission
Gits‐Muselli, M., Bretagne, S., & Alanio, A. (2019) · OBM Genetics · doi:10.21926/obm.genet.1901060
Kazanjian, P. H. (2012) · Elsevier eBooks · doi:10.1016/b978-1-4160-4390-4.00086-2
Tjampakasari, C. R., Yasmon, A., Sjahrurachman, A., & Djauzi, S. (2020) · Jurnal Biotek Medisiana Indonesia · doi:10.22435/jbmi.v9i1.3892
GÜLBUDAK, H., Öztürk, C., Kuyugöz, S., & Ülger, S. T. (2021) · Mikrobiyoloji Bulteni · doi:10.5578/mb.20140
Kazanjian, P. H. (2020) · Elsevier eBooks · doi:10.1016/b978-0-323-55512-8.00091-0
Swindell, K. (2009) · CRC Press eBooks · doi:10.3109/9780849387869-23
Cushion, M. T., Smulian, A. G., & Powers‐Fletcher, M. V. (2023) · ClinMicroNow · doi:10.1002/9781683674849.mcm0122
Cushion, M. T., Smulian, A. G., & Powers‐Fletcher, M. V. (2023) · ClinMicroNow · doi:10.1002/9781683670438.mcm0122
Alencar, C. S., Magri, M. M. C., Filho, H. H. C., & Sabino, E. C. (2026) · Frontiers in Fungal Biology · doi:10.3389/ffunb.2026.1841693
Metadata
- Authors
- Beard, C. B., Carter, J. L., Keely, S. P., Huang, L., Pieniazek, N. J., Moura, I. N. S., Roberts, J. M., Hightower, A. W., Bens, M. S., Freeman, A. R., Lee, S., Stringer, J. R., Duchin, J. S., del Rio, C., Rimland, D., Baughman, R. P., Levy, D. A., Dietz, V. J., Simon, P., & Navin, T. R.
- Affiliations
- Centers for Disease Control and Prevention (US)
- Corresponding author
- Beard, Charles B.
- Venue
- Emerging infectious diseases
- Published
- 2000-06
- Volume
- 6
- Issue
- 3
- Pages
- 265-272
- ISSN
- 1080-6040 (ISSN-L)
- 1080-6059
- PMC
- PMC2640877
- OpenAlex
- W2101933645
- Cited by
- 241
- References
- 52
- Citations by year
- 2026: 2 · 2025: 3 · 2023: 5 · 2022: 2 · 2021: 7 · 2020: 5 · 2019: 4 · 2018: 5 · 2017: 13 · 2016: 7 · 2015: 8 · 2014: 11 · 2013: 9 · 2012: 18
- FWCI
- 10.74
- Type
- journal article
- Language
- en
- Open access
- diamond
- doi.org
- Licence
- cc-by
- Locations
- Emerging infectious diseases (publishedVersion, cc-by)
- Europe PMC (PubMed Central) (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- DigitalCommons@UNMC (submittedVersion, public-domain)
- DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion, cc-by-sa)
- eScholarship (California Digital Library) (submittedVersion)
- Topics
- Health Sciences › Medicine › Epidemiology › Pneumocystis jirovecii pneumonia detection and treatment
- Life Sciences › Immunology and Microbiology › Parasitology › Parasitic Infections and Diagnostics
- Health Sciences › Medicine › Epidemiology › Pneumonia and Respiratory Infections
- Keywords
- Pneumocystis carinii, Pneumocystis carinii pneumonia, AIDS, genetic variation, multilocus genotypes, mitochondrial large subunit rRNA, dihydropteroate synthase, transmission, co-infection, primary infection, birthplace, human reservoir
- MeSH terms
- Dihydropteroate Synthase, Gene Frequency, Genotype, Humans, Mitochondria, Pneumocystis, Pneumonia, Pneumocystis, RNA, Ribosomal, United States, Genetic Variation, Logistic Models, AIDS-Related Opportunistic Infections, Sequence Analysis, DNA, DNA Primers, Genes, rRNA
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review