The DOI matches its Crossref record; 9 of the 9 references it cites were found in a registry or an index.
ggVennDiagram: An Intuitive, Easy-to-Use, and Highly Customizable R Package to Generate Venn Diagram
Open accessAbstract
Venn diagrams are widely used diagrams to show the set relationships in biomedical studies. In this study, we developed ggVennDiagram, an R package that could automatically generate high-quality Venn diagrams with two to seven sets. The ggVennDiagram is built based on ggplot2, and it integrates the advantages of existing packages, such as venn, RVenn, VennDiagram, and sf. Satisfactory results can be obtained with minimal configurations. Furthermore, we designed comprehensive objects to store the entire data of the Venn diagram, which allowed free access to both intersection values and Venn plot sub-elements, such as set label/edge and region label/filling. Therefore, high customization of every Venn plot sub-element can be fulfilled without increasing the cost of learning when the user is familiar with ggplot2 methods. To date, ggVennDiagram has been cited in more than 10 publications, and its source code repository has been starred by more than 140 GitHub users, suggesting a great potential in applications. The package is an open-source software released under the GPL-3 license, and it is freely available through CRAN (https://cran.r-project.org/package=ggVennDiagram).
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Cites
UpSetR: an R package for the visualization of intersecting sets and their properties
Conway, J. R., Lex, A., & Gehlenborg, N. (2017) · Bioinformatics · doi:10.1093/bioinformatics/btx364 · Cited by 3,586
VennDiagram: a package for the generation of highly-customizable Venn and Euler diagrams in R
Chen, H., & Boutros, P. C. (2011) · BMC Bioinformatics · doi:10.1186/1471-2105-12-35 · Cited by 3,131
InteractiVenn: a web-based tool for the analysis of sets through Venn diagrams
Heberle, H., Meirelles, G. V., da Silva, F. R., Telles, G. P., & Minghim, R. (2015) · BMC Bioinformatics · doi:10.1186/s12859-015-0611-3 · Cited by 2,580
UpSet: Visualization of Intersecting Sets
Lex, A., Gehlenborg, N., Strobelt, H., Vuillemot, R., & Pfister, H. (2014) · IEEE Transactions on Visualization and Computer Graphics · doi:10.1109/tvcg.2014.2346248 · Cited by 2,323
gplots: Various R Programming Tools for Plotting Data
Warnes, G. R., Bolker, B., Bonebakker, L., Gentleman, R., Huber, W., Liaw, A., Lumley, T., Maechler, M., Magnusson, A., Moeller, S., et al. (2005) · CRAN: Contributed Packages · doi:10.32614/cran.package.gplots · Cited by 1,228
eulerr: Area-Proportional Euler and Venn Diagrams
Larsson, J. (2016) · doi:10.32614/cran.package.eulerr · Cited by 139
A low-bias and sensitive small RNA library preparation method using randomized splint ligation
Maguire, S., Lohman, G. J. S., & Guan, S. (2020) · Nucleic Acids Research · doi:10.1093/nar/gkaa480 · Cited by 53
Harris, S., Poolman, T. M., Arvaniti, A., Cox, R., Gathercole, L., & Tomlinson, J. (2020) · American Journal of Physiology-Gastrointestinal and Liver Physiology · doi:10.1152/ajpgi.00055.2020 · Cited by 36
Horny, K., Gerhardt, P., Cherouny, A., Wülbeck, C., Utikal, J. S., & Becker, J. C. (2021) · Cancers · doi:10.3390/cancers13040649 · Cited by 29
Cited by
Exploring Epigenomic Datasets by ChIPseeker
Wang, Q., Li, M., Wu, T., Zhan, L., Li, L., Chen, M., Xie, W., Xie, Z., Hu, E., Xu, S., et al. (2022) · Current Protocols · doi:10.1002/cpz1.585 · Cited by 415
Self-citationWekemo Bioincloud: A user‐friendly platform for meta‐omics data analyses
Gao, Y., Zhang, G., Jiang, S., & Liu, Y. (2024) · iMeta · doi:10.1002/imt2.175 · Cited by 293
Terminal differentiation of villus tip enterocytes is governed by distinct Tgfβ superfamily members
(2023) · doi:10.15252/embr.202256454 · Cited by 28
Jang, J., Yeo, S., Baek, S., Jung, H. J., Lee, M. S., Choi, S. H., & Choe, Y. (2023) · Acta Neuropathologica Communications · doi:10.1186/s40478-023-01637-3 · Cited by 20
“A comparison of differentially expressed proteins between two types of experimental groups is shown in Venn diagrams [20].”
BackgroundPrimary cilia-mediated regulation of microglial secretion in Alzheimer’s disease
Yeo, S., Jang, J., Jung, H. J., Lee, H., & Choe, Y. (2023) · Frontiers in Molecular Biosciences · doi:10.3389/fmolb.2023.1250335 · Cited by 18
Metadata
- Authors
- Gao, C.-H., Yu, G., & Cai, P.
- Venue
- Frontiers in Genetics
- Publisher
- Frontiers Media SA
- Published
- 2021-09-07
- Volume
- 12
- Pages
- 706907-706907
- ISSN
- 1664-8021 (ISSN-L)
- OpenAlex
- W3198684761
- Cited by
- 474
- References
- 9
- FWCI
- 23.82
- Type
- journal article
- Language
- en
- Open access
- gold
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- CoChat. (2026). Citation check: ggVennDiagram: An Intuitive, Easy-to-Use, and Highly Customizable R Package to Generate Venn Diagram. https://app.cochat.ai/papers/10.3389/fgene.2021.706907
- The paper
- Gao, C.-H., Yu, G., & Cai, P. (2021). ggVennDiagram: An Intuitive, Easy-to-Use, and Highly Customizable R Package to Generate Venn Diagram. Frontiers in Genetics. https://doi.org/10.3389/fgene.2021.706907
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Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
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