Marker Assisted Selection (MAS) in Animal Breeding: A Review

DNA marker technologies and their applications in aquaculture genetics

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THE ASSOCIATION OF SIZE DIFFERENCES WITH SEED-COAT PATTERN AND PIGMENTATION IN PHASEOLUS VULGARIS

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Marker-assisted selection to improve drought adaptation in maize: the backcross approach, perspectives, limitations, and alternatives

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Energy Utilization by Mature, Nonpregnant, Nonlactating Cows of Different Types

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From QTL to QTN identification in livestock – winning by points rather than knock‐out: a review

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DNA fingerprints applied to gene introgression in breeding programs.

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Microsatellite mapping of the gene causing weaver disease in cattle will allow the study of an associated quantitative trait locus.

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Detection of loci affecting milk production and health traits in an elite US Holstein population using microsatellite markers

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Benefits from marker-assisted selection under an additive polygenic genetic model1

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Marker-assisted preselection of young dairy sires prior to progeny-testing

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Association of Genetic Defects with Yield and Type Traits: The Weaver Locus Effect on Yield

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Marker-Assisted Selection for a Sex-Limited Character in a Nucleus Breeding Population

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Quantitative genetic variation in body size of mice from new mutations.

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Evaluation of marker assisted selection in pig enterprises

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La genómica funcional: herramientas para mejorar la sanidad y el bienestar del ganado

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Utilisation of marker assisted selection in a commercial dairy cow population

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Genetic and Economic Responses for Within-Family Marker-Assisted Selection in Dairy Cattle Breeding Schemes

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Detection of Putative Loci Affecting Milk, Health, and Conformation Traits in a US Holstein Population Using 105 Microsatellite Markers

Tassell, C. P. V., Ashwell, M. S., & Sonstegard, T. S. (2000) · Journal of Dairy Science · doi:10.3168/jds.s0022-0302(00)75058-2 · Cited by 30 · see citing works

Marker-assisted selection in sheep and goats.

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Fine mapping of multiple QTL using combined linkage and linkage disequilibrium mapping – A comparison of single QTL and multi QTL methods

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Marker‐Assisted Selection for Aquaculture Species

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Strategies for Estimating Genetic Parameters in Marker-Assisted Best Linear Unbiased Predictor Models in Dairy Cattle

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Future opportunities in livestock production and biomedicine from advances in animal cloning

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Cyclic genotyping strategies. I: A comparison of ranking criteria

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Combined use of phenotypic and genotypic information in sampling animals for genotyping in detection of quantitative trait loci

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Selection for Favorable Health Traits: A Potential Approach to Cope with Diseases in Farm Animals

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Genetic analysis and exploration of major effect QTLs underlying oil content in peanut

Yang, Y., Li, Y., Cheng, Z., Su, Q., Jin, X., Song, Y., & Wang, J. (2023) · Theoretical and Applied Genetics · doi:10.1007/s00122-023-04328-8 · Cited by 33 · see citing works

Genomic Selection and Genome-Wide Association Analysis for Stress Response, Disease Resistance and Body Weight in European Seabass

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Conservation and Selection of Genes Related to Environmental Adaptation in Native Small Ruminant Breeds: A Review

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Genomic resources and their applications in aquaculture of Asian seabass ( Lates calcarifer )

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Climate change and dairy farming sustainability; a causal loop paradox and its mitigation scenario

Astuti, P. K., Ayoob, A., Strausz, P., Beena, V., Kumar, S. H., & Kusza, S. (2024) · Heliyon · doi:10.1016/j.heliyon.2024.e25200 · Cited by 25 · see citing works

Unveiling Methods to Stimulate Plant Resistance against Pathogens

Riseh, R. S., & Vazvani, M. G. (2024) · Frontiers in Bioscience-Landmark · doi:10.31083/j.fbl2905188 · Cited by 25 · see citing works

Molecular markers and its application in animal breeding

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Biotechnological Tools to Enhance Sustainable Production

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Genetics of Disease Resistance in Chicken

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Genetic Resistance of Bovines to Theileriosis

Valente, D., Gomes, J., Coelho, A. C., & Carolino, I. (2022) · Animals · doi:10.3390/ani12212903 · Cited by 15 · see citing works

Management and Genetic Approaches for Enhancing Meat Quality in Poultry Production Systems: A Comprehensive Review

Naeem, M., Fatima, A., Raut, R., Kumar, R., Tushar, Z. H., Rahman, F. A., & Bourassa, D. V. (2026) · Poultry · doi:10.3390/poultry5010004 · Cited by 14 · see citing works

Nutrigenomics and Epigenetic Regulation in Poultry: DNA-Based Mechanisms Linking Diet to Performance and Health

Naeem, M., & Fatima, A. (2025) · DNA · doi:10.3390/dna5040060 · Cited by 13 · see citing works

Enhancing the genomic prediction accuracy of swine agricultural economic traits using an expanded one-hot encoding in CNN models

Wang, Z., Li, W., & Tang, Z. (2024) · Journal of Integrative Agriculture · doi:10.1016/j.jia.2024.03.071 · Cited by 12 · see citing works

Biotechnological innovation in fish breeding: from marker assisted selection to genetic modification

Lal, J., Vaishnav, A., Singh, S. K., Meena, D. K., Biswas, P., Mehta, N. K., & Priyadarshini, M. B. (2024) · Discover Biotechnology · doi:10.1007/s44340-024-00007-6 · Cited by 12 · see citing works

Genetic polymorphisms within the ETAA1 gene associated with growth traits in Chinese sheep breeds

Wijayanti, D., Erdenee, S., Akhatayeva, Z., Li, H., Li, J., Cai, Y., Jiang, F., Xu, H., & Lan, X. (2022) · Animal Genetics · doi:10.1111/age.13197 · Cited by 12 · see citing works

Applications of Next-Generation Sequencing Technologies and Statistical Tools in Identifying Pathways and Biomarkers for Heat Tolerance in Livestock

Kalaignazhal, G., Sejian, V., Silpa, M. V., Mishra, C., Rebez, E. B., Chauhan, S. S., DiGiacomo, K., Lacetera, N., & Dunshea, F. R. (2024) · Veterinary Sciences · doi:10.3390/vetsci11120616 · Cited by 10 · see citing works

Assessing the performance of a novel method for genomic selection: rrBLUP-method6

Ahmadi, Z., Ghafouri‐Kesbi, F., & Zamani, P. (2021) · Journal of Genetics · doi:10.1007/s12041-021-01275-5 · Cited by 10 · see citing works

Association of Ovar‐DRB1 alleles with innate immune responses in sheep

Esmailnejad, A., Ganjiani, V., Nasab, E. H., & Nazıfı, S. (2021) · Veterinary Medicine and Science · doi:10.1002/vms3.683 · Cited by 10 · see citing works

Crossbreeding analyses and polymorphic associations of gallinacin genes with growth traits in chickens

Saleh, M. S., Iraqi, M. M., Khalil, M. H., & Camarda, A. (2020) · Livestock Science · doi:10.1016/j.livsci.2020.104118 · Cited by 10 · see citing works

Direct and indirect contributions of molecular genetics to farm animal welfare: a review

Demir, E., Bilginer, Ü., Balcioglu, M. S., & Karslı, T. (2021) · Animal Health Research Reviews · doi:10.1017/s1466252321000104 · Cited by 10 · see citing works

Gene Editing for Enhanced Swine Production: Current Advances and Prospects

Ju, W. S., Kim, S., Lee, J.-Y., Lee, H., No, J.-G., Lee, S., & Oh, K. B. (2025) · Animals · doi:10.3390/ani15030422 · Cited by 8 · see citing works

Fine Mapping and Identification of a Candidate Gene of Downy Mildew Resistance, RPF2, in Spinach (Spinacia oleracea L.)

Gao, S., Lu, T., She, H., Xu, Z., Zhang, H., Liu, Z., & Qian, W. (2022) · International Journal of Molecular Sciences · doi:10.3390/ijms232314872 · Cited by 8 · see citing works

Immunogenetics applied to control salmonellosis in chicken: a review

Tohidi, R., Javanmard, A., & Idris, I. (2017) · Journal of Applied Animal Research · doi:10.1080/09712119.2017.1301256 · Cited by 8 · see citing works

Identification of novel single-nucleotide polymorphism at exon1 and 2 region of B4GALT1 gene and its association with milk production traits in crossbred cattle of Kerala, India

Valsalan, J., Sadan, T., Venkatachalapathy, R. T., Anilkumar, K., & Aravindakshan, T. (2021) · Animal Biotechnology · doi:10.1080/10495398.2020.1866591 · Cited by 8 · see citing works

Genome-wide association study identifies genetic variants underlying footrot in Portuguese Merino sheep

Gaspar, D., Ginja, C., Carolino, N., Leão, C., Monteiro, H., Tábuas, L., Branco, S., Padre, L., Caetano, P., Romão, R., et al. (2024) · BMC Genomics · doi:10.1186/s12864-023-09844-x · Cited by 7 · see citing works

Estimate of the Association of IGF-I and IGFALS Genes with Growth Traits in Hamdani Sheep

Bayraktar, M., & Shoshin, O. (2021) · Brazilian Archives of Biology and Technology · doi:10.1590/1678-4324-2021210262 · Cited by 7 · see citing works

Comparative analysis of A1 and A2 allele detection efficiency for bovine CSN2 gene by AS-PCR methods.

Kulibaba, R., Sakhatskyi, M., & Liashenko, Y. (2023) · Acta Biochimica Polonica · doi:10.18388/abp.2020_6530 · Cited by 10 · see citing works

Association between GH, PRL, LEP, and PIT-1 gene polymorphisms and growth traits in Indonesian Rambon indigenous cattle

Prihandini, P. W., Hariyono, D. N. H., Sari, A. P. Z. N. L., Tribudi, Y. A., Ibrahim, A., Luthfi, M., Wiyono, A., Irmawanti, S., Aryogi, A., Robba, D. K., et al. (2025) · Tropical Animal Health and Production · doi:10.1007/s11250-025-04304-y · Cited by 6 · see citing works

Associations between Bovine β-Defensin 4 Genotypes and Production Traits of Polish Holstein-Friesian Dairy Cattle

Brodowska, P., Zwierzchowski, L., Marczak, S., Jarmuż, W., & Bagnicka, E. (2019) · Animals · doi:10.3390/ani9100723 · Cited by 6 · see citing works

DNA polymorphism of FSHR gene and its association with infertility traits in Egyptian buffaloes

Ramadan, S., Saker, A.-A., & Shafik, B. M. (2020) · Benha Veterinary Medical Journal · doi:10.21608/bvmj.2020.34139.1221 · Cited by 6 · see citing works

A New SNPs at 3’UTR Region of calpain 1 gene and its association with growth and meat quality traits in beef cattle

Dairoh, D., Jakaria, J., Ulum, M. F., & Sumantri, C. (2021) · Journal of the Indonesian Tropical Animal Agriculture · doi:10.14710/jitaa.47.1.17-28 · Cited by 6 · see citing works

Challenges and opportunities of goat breeding practices in low- and middle-income countries

Bashiru, H. A., LESTARI, D. A., Mustofa, F., & Setiaji, A. (2026) · Frontiers in Animal Science · doi:10.3389/fanim.2026.1769206 · Cited by 5 · see citing works

High resolution melt curve analysis identifies a novel SNP (G21A) in butyrophilin gene having significant association with milk production traits in Holstein Friesian crossbreds of Kerala

Potu, H., Lali, F. A., Anilkumar, K., Dipu, M. T., & Aravindakshan, T. V. (2022) · Animal Biotechnology · doi:10.1080/10495398.2022.2039169 · Cited by 5 · see citing works

The Potency of Leptin Gene as a Selection Marker of Economic Traits for Madura Cattle: Preliminary Study

Nugroho, T., Widi, T. S. M., & Maharani, D. (2022) · Advances in biological sciences research/Advances in Biological Sciences Research · doi:10.2991/absr.k.220207.048 · Cited by 5 · see citing works

Haplotype structure of MSTN, IGF1, and BMP2 genes in Tunisian goats (Capra hircus) and their association with morphometric traits

Chalbi, S., Dettori, M. L., Djemali, M., Vacca, G. M., Petretto, E., Pazzola, M., & Bedhiaf‐Romdhani, S. (2022) · Tropical Animal Health and Production · doi:10.1007/s11250-022-03403-4 · Cited by 5 · see citing works

Analysis of calpastatin and сallipyge genes polymorphism in Prydniprovska meat sheep

Помітун, І., Rossokha, V., Boyko, Y., Guzevatyi, O., Shpilka, M., & Кулібаба, Р. О. (2019) · Agricultural science and practice · doi:10.15407/agrisp6.02.058 · Cited by 5 · see citing works

Kappa-casein genotyping in tropical milking Criollo and its association to milk production and composition

Becerril-Pérez, C. M., Álvarez-Cepeda, A. A., Rosendo-Ponce, A., Alonso-Morales, R. A., Gayosso-Vázquez, A., Hernández, G. T., & Rosales-Martínez, F. (2020) · Tropical Animal Health and Production · doi:10.1007/s11250-020-02317-3 · Cited by 5 · see citing works

A genome-wide linkage map and QTL mapping for growth traits of Asian rice-field eel (Monopterus albus)

Shi, M., Luo, H., Zhang, W., Jiang, Y., Chen, J., Cheng, Y., Hu, W., & Xia, X.-Q. (2021) · Aquaculture · doi:10.1016/j.aquaculture.2021.736394 · Cited by 5 · see citing works

Chromosomal-level reference genome assembly of muskox (Ovibos moschatus) from Banks Island in the Canadian Arctic, a resource for conservation genomics

Lok, S., Lau, T. N. H., Trost, B., Tong, A. H. Y., Paton, T., Wintle, R. F., Engstrom, M. D., Gunn, A., & Scherer, S. W. (2024) · Scientific Reports · doi:10.1038/s41598-024-67270-9 · Cited by 4 · see citing works

Genome-Wide Association Study Revealed Candidate Genes Associated with Litter Size, Weight, and Body Size Traits in Tianmu Polytocous Sheep (Ovis aries)

Liu, W., Ma, S., Lu, Q., Tang, S. L., Mamat, N., Wang, Y., Hong, W., Hu, X., Wu, C., & Fu, X. (2025) · Biology · doi:10.3390/biology14101446 · Cited by 4 · see citing works

A link between evolution and society fostering the UN sustainable development goals

Meester, L. D., Vázquez‐Domínguez, E., Kassen, R., Forest, F., Bellon, M. R., Koskella, B. L., Scherson, R. A., Colli, L., Hendry, A. P., Crandall, K. A., et al. (2024) · Evolutionary Applications · doi:10.1111/eva.13728 · Cited by 4 · see citing works

Integrating targeted genetic markers to genotyping-by-sequencing for an ultimate genotyping tool

de Ronne, M., Abed, A., Légaré, G., Laroche, J., St-Amour, V.-T. B., Fortier, É., Beattie, A. D., Badea, A., Khanal, R. R., O’Donoughue, L. S., et al. (2024) · Theoretical and Applied Genetics · doi:10.1007/s00122-024-04750-6 · Cited by 4 · see citing works

Molecular associations of gallinacin genes with immune response against Salmonella typhimurium in chickens

Saleh, M. S., Khalil, M. H., Iraqi, M. M., & Camarda, A. (2020) · Livestock Science · doi:10.1016/j.livsci.2020.104315 · Cited by 4 · see citing works

Fine mapping and candidate gene analysis of proportion of four-seed pods by soybean CSSLs

Cao, F., Wei, R., Xie, J., Hou, L., Kang, C., Zhao, T., Sun, C., Yang, M., Zhao, Y., Li, C., et al. (2023) · Frontiers in Plant Science · doi:10.3389/fpls.2022.1104022 · Cited by 4 · see citing works

Polymorphism of CSN2 and TNF-α Genes in the Population of Holstein Cattle Bred in Ukraine

Кулібаба, Р. О., Liashenko, Y. V., & Sakhatskyi, M. I. (2024) · Cytology and Genetics · doi:10.3103/s0095452724010055 · Cited by 4 · see citing works

Biotechnological Advancements in Livestock Production

Sharma, B., Chettri, D., & Verma, A. K. (2021) · Sustainable agriculture reviews · doi:10.1007/978-3-030-76529-3_3 · Cited by 4 · see citing works

JUSTIFICATION OF CANDIDATE POLYMORPHISMS USAGE IN MARKER-ASSISTED SELECTION OF UKRAINIAN MEATY PIG BREED

Rossokha, V., Oliinychenko, Y. K., Boyko, Y., & Zaderikhina, E. (2020) · The Scientific and Technical Bulletin of the Institute of Animal Science NAAS of Ukraine · doi:10.32900/2312-8402-2020-123-149-156 · Cited by 3 · see citing works

Biotechnological therapies for animal reproduction in the livestock sector

Arain, S. (2023) · Pure and Applied Biology · doi:10.19045/bspab.2023.120130 · Cited by 3 · see citing works

Association of insulin receptor substrate 1 ( IRS-1 ) gene polymorphism with growth and litter-related traits in NMER rabbits

Megahed, N. F., Abdel-Kafy, E.-S. M., El‐Kassas, S., Sobhy, H. M., Hekal, S. H. A., Alagawany, M. M., & Manaa, E. A. (2023) · Animal Biotechnology · doi:10.1080/10495398.2023.2219705 · Cited by 3 · see citing works

The Multi-Loci Genotypes of the Myostatin Gene Associated with Growth Indicators of Intensively Fattened Lambs of Latvian Sheep

Ilva, T., Kairiša, D., Plavina, S., Krasņevska, N., Paramonovs, J., Šenfelde, L., & Paramonova, N. (2024) · Animals · doi:10.3390/ani14213143 · Cited by 3 · see citing works

ВЛИЯНИЕ ГЕНОТИПОВ ПО ДНК-МАРКЕРАМ НА ВОСПРОИЗВОДИТЕЛЬНЫЕ КАЧЕСТВА СВИНЕЙ ПОРОД КРУПНАЯ БЕЛАЯ И ЛАНДРАС

Эрнста, Ф. Ф. Ж. —. В. И. А. Л. К., МЕЛЬНИКОВА, Е. Е., Владимирович, Б. Н., Сержевна, Ф. М., Васильевна, К. О., СЕРМЯГИН, А. А., BREM, G., & Зиновьева, Н. А. (2019) · Sel skokhozyaistvennaya Biologiya · doi:10.15389/agrobiology.2019.2.227rus · Cited by 3 · see citing works

Genetic structure features of cattle populations of Ukrainian selection by polymorphism of loci, associated with milk productivity traits

Кулібаба, Р. О., Liashenko, Y. V., & Yurko, P. S. (2019) · Agricultural science and practice · doi:10.15407/agrisp6.03.037 · Cited by 3 · see citing works

Genetic Selection and Advances in Swine Breeding:A Review of its Impact on Sow’s Reproductive Traits

Reproto, R. O. (2020) · Cited by 3 · see citing works

Polymorphism of TLR1, TLR4, and SLC11A1 genes in populations of different cattle breeds of Ukrainian selection

Кулібаба, Р. О., Liashenko, Y. V., & Ivashchenko, O. (2021) · Agricultural science and practice · doi:10.15407/agrisp8.03.025 · Cited by 3 · see citing works

CATSPER2 and SPEF2 are potential molecular markers for boar sperm quality: a population association study

Ahmed, Z., Liu, M., Huang, S., & Xu, D. (2024) · Journal of Assisted Reproduction and Genetics · doi:10.1007/s10815-024-03252-0 · Cited by 2 · see citing works

Mutations Upstream of ppp2ca Affect Body Weight in Asian Seabass

Wong, J., Yeo, S., Tsai, T.-H., Tay, Y., Yang, Z., Wang, L., Sun, F., Lee, M., Wen, Y., Pang, H., et al. (2025) · Marine Biotechnology · doi:10.1007/s10126-025-10527-9 · Cited by 2 · see citing works

Genetic variation and mRNA expression of the ELOVL6 and CRTC2 genes in Kalmyk cattle

Kazhgaliyev, N., Nurgulsim, K., Makhanbetova, A. B., Ibrayev, D., Shaikenova, K., Hasen, Z., Amantay, S., Zhumagaziyeva, S., Mukhametzharova, I., Akkair, B., et al. (2025) · Animal Biotechnology · doi:10.1080/10495398.2025.2583795 · Cited by 2 · see citing works

Exploration of allelic variants in short tandem repeats (STRs) flanking milk production QTLs and their association with milk production traits in Indian water buffaloes

Vani, A., Kumar, S., Kumar, S., Chauhan, A., Sahoo, N. R., Verma, M. R., Tomar, A., & Kumar, T. V. (2022) · Tropical Animal Health and Production · doi:10.1007/s11250-022-03215-6 · Cited by 2 · see citing works

Candidacy of genes associated with economic traits for Madura cattle in Sonok area

Nugroho, T., Maharani, D., & Widi, T. S. M. (2022) · IOP Conference Series Earth and Environmental Science · doi:10.1088/1755-1315/1001/1/012018 · Cited by 2 · see citing works

Research Article Polymorphisms in genes coding milk proteins and protein hormones involved in milk production traits in Brazilian Guzerá cattle

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THE STUDY OF EFFECT OF GENOTYPES FOR DNA MARKER ON REPRODUCTIVE QUALITIES OF SOWS OF LARGE WHITE AND LANDRACE BREEDS

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Additional file 1 of Genome-wide association study identifies genetic variants underlying footrot in Portuguese Merino sheep

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