The DOI matches its Crossref record; 3 of the 3 references it cites were found in a registry or an index.
A high-resolution analysis of arrestin2 interactions responsible for CCR5 endocytosis
Open accessPreprint — published as 10.7554/elife.106839
Abstract
Clathrin-mediated endocytosis (CME) is crucial for regulating G protein-coupled receptors (GPCRs) via phosphorylation-dependent arrestin interactions. Despite detailed structural knowledge on the arrestin interactions with phosphorylated tails of GPCRs, the interplay between receptor phosphorylation and arrestin coupling to the CME machinery is not well understood, in particular due to the weakness and dynamics of the individual molecular interactions. Here, we have characterized the interactions of arrestin2, which is activated by the phosphorylated C-terminus of the human chemokine receptor 5 (CCR5), with the main protein constituents of CME, namely clathrin and AP2, by solution NMR spectroscopy, biochemical, and cellular assays. The NMR analysis revealed that arrestin2 interacts weakly with clathrin through a single binding site, independent of arrestin2 activation. In contrast, the arrestin2-AP2 interaction is stronger, requires arrestin2 activation by the CCR5 phospho-tail, and depends quantitatively on its degree of phosphorylation. These in vitro results are corroborated by cellular assays, which show that the chemokine-induced formation of a long-lived CCR5-arrestin2 internalization complex depends strongly on the interaction of arrestin2 with AP2, but not with clathrin. Taken together, these findings provide quantitative, atom-scale insights on the first steps of CCR5 endocytosis.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
Highly accurate protein structure prediction with AlphaFold
Jumper, J., Evans, R., Pritzel, A., Green, T., Figurnov, M., Ronneberger, O., Tunyasuvunakool, K., Bates, R., Žídek, A., Potapenko, A., et al. (2021) · Nature · doi:10.1038/s41586-021-03819-2 · Cited by 43,764
Oakley, R. H., Laporte, S. A., Holt, J. A., Barak, L. S., & Caron, M. G. (2001) · Journal of Biological Chemistry · doi:10.1074/jbc.m101450200 · Cited by 455
Structure of the neurotensin receptor 1 in complex with β-arrestin 1
Huang, W., Masureel, M., Qu, Q., Janetzko, J., Inoue, A., Kato, H. E., Robertson, M. J., Nguyen, K. C., Glenn, J. S., Skiniotis, G., et al. (2020) · Nature · doi:10.1038/s41586-020-1953-1 · Cited by 373
Flagged first, then by citations
Research works printed but not linked: 73
- Alkhatib, 2009, The biology of CCR5 and CXCR4, Current Opinion in HIV and AIDS, 4, 96, 10.1097/COH.0b013e328324bbec · DOI
- Allan, 2012, OMERO: flexible, model-driven data management for experimental biology, Nature Methods, 9, 245, 10.1038/nmeth.1896 · DOI · Paper page
- Ariel, 2006, Apoptotic neutrophils and T cells sequester chemokines during immune response resolution through modulation of CCR5 expression, Nature Immunology, 7, 1209, 10.1038/ni1392 · DOI
- Barsi-Rhyne, 2022, Discrete GPCR-triggered endocytic modes enable β-arrestins to flexibly regulate cell signaling, eLife, 11, 10.7554/eLife.81563 · DOI
- Beautrait, 2017, A new inhibitor of the β-arrestin/AP2 endocytic complex reveals interplay between GPCR internalization and signalling, Nature Communications, 8, 10.1038/ncomms15054 · DOI
- Benz, 2022, Proteome-scale mapping of binding sites in the unstructured regions of the human proteome, Molecular Systems Biology, 18, 10.15252/msb.202110584 · DOI
- Bolte, 2006, A guided tour into subcellular colocalization analysis in light microscopy, Journal of Microscopy, 224, 213, 10.1111/j.1365-2818.2006.01706.x · DOI
- Bous, 2022, Structure of the vasopressin hormone-V2 receptor-β-arrestin1 ternary complex, Science Advances, 8, 10.1126/sciadv.abo7761 · DOI
- Collins, 2002, Molecular architecture and functional model of the endocytic AP2 complex, Cell, 109, 523, 10.1016/s0092-8674(02)00735-3 · DOI · Paper page
- Congreve, 2020, Impact of GPCR structures on drug discovery, Cell, 181, 81, 10.1016/j.cell.2020.03.003 · DOI
- D’Agostino, 2020, β-Arrestin1 and β-Arrestin2 Are Required to Support the Activity of the CXCL12/HMGB1 Heterocomplex on CXCR4, Frontiers in Immunology, 11, 10.3389/fimmu.2020.550824 · DOI
- Delaglio, 1995, NMRPipe: a multidimensional spectral processing system based on UNIX pipes, Journal of Biomolecular NMR, 6, 277, 10.1007/BF00197809 · DOI
- Dell’Angelica, 2001, Clathrin-binding proteins: got a motif? Join the network!, Trends in Cell Biology, 11, 315, 10.1016/s0962-8924(01)02043-8 · DOI · Paper page
- Escola, 2010, CC chemokine receptor 5 (CCR5) desensitization: cycling receptors accumulate in the trans-golgi network, The Journal of Biological Chemistry, 285, 41772, 10.1074/jbc.M110.153460 · DOI
- Fraile-Ramos, 2003, Endocytosis of the viral chemokine receptor US28 does not require beta-arrestins but is dependent on the clathrin-mediated pathway, Traffic, 4, 243, 10.1034/j.1600-0854.2003.00079.x · DOI
- Gaertner, 2008, Highly potent, fully recombinant anti-HIV chemokines: reengineering a low-cost microbicide, PNAS, 105, 17706, 10.1073/pnas.0805098105 · DOI
- Goodman, 1996, Beta-arrestin acts as a clathrin adaptor in endocytosis of the beta2-adrenergic receptor, Nature, 383, 447, 10.1038/383447a0 · DOI
- Goodman, 1997, Arrestin/clathrin interaction: Localization of the arrestin binding locus to the clathrin terminal domain, The Journal of Biological Chemistry, 272, 15017, 10.1074/jbc.272.23.15017 · DOI
- Gu, 2023, Ligand-Dependent Mechanisms of CC Chemokine Receptor 5 (CCR5) Trafficking Revealed by APEX2 Proximity Labeling Proteomics, 10.1101/2023.11.01.565224 · DOI
- Gurevich, 2019, GPCR signaling regulation: the role of GRKs and arrestins, Frontiers in Pharmacology, 10, 10.3389/fphar.2019.00125 · DOI
- Han, 2001, Crystal structure of beta-arrestin at 1.9 A: possible mechanism of receptor binding and membrane translocation, Structure, 9, 869, 10.1016/s0969-2126(01)00644-x · DOI
- Hanyaloglu, 2008, Regulation of GPCRs by endocytic membrane trafficking and its potential implications, Annual Review of Pharmacology and Toxicology, 48, 537, 10.1146/annurev.pharmtox.48.113006.094830 · DOI
- Hughes, 2018, A guide to chemokines and their receptors, The FEBS Journal, 285, 2944, 10.1111/febs.14466 · DOI
- Isaikina, 2021, Structural basis of the activation of the CC chemokine receptor 5 by a chemokine agonist, Science Advances, 7, 10.1126/sciadv.abg8685 · DOI
- Isaikina, 2022, Chapter 6 - preparation of a stable CCL5·CCR5·gi signaling complex for cryo-EM analysis, 115, 10.1016/bs.mcb.2022.03.001 · DOI
- Isaikina, 2023, A key GPCR phosphorylation motif discovered in arrestin2⋅CCR5 phosphopeptide complexes, Molecular Cell, 83, 2108, 10.1016/j.molcel.2023.05.002 · DOI
- Jackson, 2010, A large-scale conformational change couples membrane recruitment to cargo binding in the AP2 clathrin adaptor complex, Cell, 141, 1220, 10.1016/j.cell.2010.05.006 · DOI
- Janetzko, 2022, Membrane phosphoinositides regulate GPCR-β-arrestin complex assembly and dynamics, Cell, 185, 4560, 10.1016/j.cell.2022.10.018 · DOI
- Jean-Charles, 2017, G protein-coupled receptor signaling through β-Arrestin-dependent mechanisms, Journal of Cardiovascular Pharmacology, 70, 142, 10.1097/FJC.0000000000000482 · DOI
- Jiao, 2019, Recent advances targeting CCR5 for cancer and its role in immuno-oncology, Cancer Research, 79, 4801, 10.1158/0008-5472.CAN-19-1167 · DOI
- Kaksonen, 2018, Mechanisms of clathrin-mediated endocytosis, Nature Reviews. Molecular Cell Biology, 19, 313, 10.1038/nrm.2017.132 · DOI · Paper page
- Kang, 2009, Structure of an arrestin2-clathrin complex reveals a novel clathrin binding domain that modulates receptor trafficking, The Journal of Biological Chemistry, 284, 29860, 10.1074/jbc.M109.023366 · DOI
- Kang, 2015, Crystal structure of rhodopsin bound to arrestin by femtosecond X-ray laser, Nature, 523, 561, 10.1038/nature14656 · DOI
- Kelly, 2014, Clathrin adaptors: AP2 controls clathrin polymerization with a membrane-activated switch, Science, 345, 459, 10.1126/science.1254836 · DOI
- Kern, 2009, Arrestin2/clathrin interaction is regulated by key N- and C-terminal regions in arrestin2, Biochemistry, 48, 7190, 10.1021/bi900369c · DOI
- Kim, 2002, Differential roles of arrestin-2 interaction with clathrin and adaptor protein 2 in G protein-coupled receptor trafficking, The Journal of Biological Chemistry, 277, 30760, 10.1074/jbc.M204528200 · DOI
- Komolov, 2018, G protein-coupled receptor kinases: Past, present and future, Cellular Signalling, 41, 17, 10.1016/j.cellsig.2017.07.004 · DOI
- Kovtun, 2020, Architecture of the AP2/clathrin coat on the membranes of clathrin-coated vesicles, Science Advances, 6, 10.1126/sciadv.aba8381 · DOI
- Krupnick, 1997, Arrestin/Clathrin Interaction: localization of the clathrin binding domain of nonvisual arrestins to the carboxyl terminus, Journal of Biological Chemistry, 272, 15011, 10.1074/jbc.272.23.15011 · DOI
- Lally, 2017, C-edge loops of arrestin function as a membrane anchor, Nature Communications, 8, 10.1038/ncomms14258 · DOI
- Laporte, 2000, The interaction of beta-arrestin with the AP-2 adaptor is required for the clustering of beta 2-adrenergic receptor into clathrin-coated pits, The Journal of Biological Chemistry, 275, 23120, 10.1074/jbc.M002581200 · DOI
- Laporte, 2002, beta-Arrestin/AP-2 interaction in G protein-coupled receptor internalization: identification of a beta-arrestin binging site in beta 2-adaptin, The Journal of Biological Chemistry, 277, 9247, 10.1074/jbc.M108490200 · DOI
- Lee, 2015, NMRFAM-SPARKY: enhanced software for biomolecular NMR spectroscopy, Bioinformatics, 31, 1325, 10.1093/bioinformatics/btu830 · DOI
- Lemmon, 2012, Getting in touch with the clathrin terminal domain, Traffic, 13, 511, 10.1111/j.1600-0854.2011.01321.x · DOI
- Maharana, 2023, Structural snapshots uncover a key phosphorylation motif in GPCRs driving β-arrestin activation, Molecular Cell, 83, 2091, 10.1016/j.molcel.2023.04.025 · DOI
- Martins, 2020, Arrestin recruitment to C-C chemokine receptor 5: potent C-C chemokine ligand 5 analogs reveal differences in dependence on receptor phosphorylation and isoform-specific recruitment bias, Molecular Pharmacology, 98, 599, 10.1124/molpharm.120.000036 · DOI
- Moaven, 2013, Visual arrestin interaction with clathrin adaptor AP-2 regulates photoreceptor survival in the vertebrate retina, PNAS, 110, 9463, 10.1073/pnas.1301126110 · DOI
- Moo, 2021, Arrestin-dependent and -independent internalization of G protein–coupled receptors: methods, mechanisms, and implications on cell signaling, Molecular Pharmacology, 99, 242, 10.1124/molpharm.120.000192 · DOI
- Mueller, 2002, Pathways for internalization and recycling of the chemokine receptor CCR5, Blood, 99, 785, 10.1182/blood.v99.3.785 · DOI
- Naudi-Fabra, 2024, An extended interaction site determines binding between AP180 and AP2 in clathrin mediated endocytosis, Nature Communications, 15, 10.1038/s41467-024-50212-4 · DOI
- Oakley, 2000, Differential affinities of visual arrestin, beta arrestin1, and beta arrestin2 for G protein-coupled receptors delineate two major classes of receptors, The Journal of Biological Chemistry, 275, 17201, 10.1074/jbc.M910348199 · DOI
- Otero, 2006, Opposite fate of endocytosed CCR7 and its ligands: recycling versus degradation, Journal of Immunology, 177, 2314, 10.4049/jimmunol.177.4.2314 · DOI
- Patterson, 2021, CCR5 inhibition in critical COVID-19 patients decreases inflammatory cytokines, increases CD8 T-cells, and decreases SARS-CoV2 RNA in plasma by day 14, International Journal of Infectious Diseases, 103, 25, 10.1016/j.ijid.2020.10.101 · DOI
- Popova, 2013, Clathrin-mediated endocytosis and adaptor proteins, Acta Naturae, 5, 62, 10.32607/20758251-2013-5-3-62-73 · DOI
- Schindelin, 2012, Fiji: an open-source platform for biological-image analysis, Nature Methods, 9, 676, 10.1038/nmeth.2019 · DOI · Paper page
- Schmid, 2006, Role of the AP2 beta-appendage hub in recruiting partners for clathrin-coated vesicle assembly, PLOS Biology, 4, 10.1371/journal.pbio.0040262 · DOI
- Schneider, 2012, NIH Image to ImageJ: 25 years of image analysis, Nature Methods, 9, 671, 10.1038/nmeth.2089 · DOI · Paper page
- Shiraishi, 2021, Biphasic activation of β-arrestin 1 upon interaction with a GPCR revealed by methyl-TROSY NMR, Nature Communications, 12, 10.1038/s41467-021-27482-3 · DOI
- Signoret, 2005, Agonist-induced endocytosis of CC chemokine receptor 5 is clathrin dependent, Molecular Biology of the Cell, 16, 902, 10.1091/mbc.E04-08-0687 · DOI
- Skinner, 2016, CcpNmr AnalysisAssign: a flexible platform for integrated NMR analysis, Journal of Biomolecular NMR, 66, 111, 10.1007/s10858-016-0060-y · DOI
- Smith, 1998, Clathrin coats at 21 Å resolution: a cellular assembly designed to recycle multiple membrane receptors, The EMBO Journal, 17, 4943, 10.1093/emboj/17.17.4943 · DOI
- Smith, 2017, Weak molecular interactions in clathrin-mediated endocytosis, Frontiers in Molecular Biosciences, 4, 10.3389/fmolb.2017.00072 · DOI
- Smith, 2022, Capturing the mechanics of clathrin-mediated endocytosis, Current Opinion in Structural Biology, 75, 10.1016/j.sbi.2022.102427 · DOI
- Tohgo, 2003, The stability of the G protein-coupled receptor-beta-arrestin interaction determines the mechanism and functional consequence of ERK activation, The Journal of Biological Chemistry, 278, 6258, 10.1074/jbc.M212231200 · DOI
- Tugarinov, 2003, Cross-correlated relaxation enhanced 1H[bond]13C NMR spectroscopy of methyl groups in very high molecular weight proteins and protein complexes, Journal of the American Chemical Society, 125, 10420, 10.1021/ja030153x · DOI
- Tugarinov, 2006, Isotope labeling strategies for the study of high-molecular-weight proteins by solution NMR spectroscopy, Nature Protocols, 1, 749, 10.1038/nprot.2006.101 · DOI
- Violin, 2006, G-protein-coupled receptor kinase specificity for beta-arrestin recruitment to the beta2-adrenergic receptor revealed by fluorescence resonance energy transfer, The Journal of Biological Chemistry, 281, 20577, 10.1074/jbc.M513605200 · DOI
- Weis, 2018, The molecular basis of G protein-coupled receptor activation, Annual Review of Biochemistry, 87, 897, 10.1146/annurev-biochem-060614-033910 · DOI · Paper page
- Wiktor, 2013, Characterization of structure, dynamics, and detergent interactions of the anti-HIV chemokine variant 5P12-RANTES, Biophysical Journal, 105, 2586, 10.1016/j.bpj.2013.10.025 · DOI
- Wolfe, 2007, Clathrin-dependent mechanisms of G protein-coupled receptor endocytosis, Traffic, 8, 462, 10.1111/j.1600-0854.2007.00551.x · DOI
- Xiao, 2004, Activation-dependent conformational changes in {beta}-arrestin 2, The Journal of Biological Chemistry, 279, 55744, 10.1074/jbc.M409785200 · DOI
- Zeng, 2022, CCL5/CCR5 axis in human diseases and related treatments, Genes & Diseases, 9, 12, 10.1016/j.gendis.2021.08.004 · DOI
- Zhuo, 2015, Nuclear magnetic resonance structural mapping reveals promiscuous interactions between clathrin-box motif sequences and the N-terminal domain of the clathrin heavy chain, Biochemistry, 54, 2571, 10.1021/acs.biochem.5b00065 · DOI
Metadata
- Authors
- Petrovic, I., Desai, S., Isaikina, P., Abiko, L. A., Spang, A., & Grzesiek, S.
- Affiliations
- University of Basel (CH)
- Paul Scherrer Institute (CH)
- Corresponding author
- Grzesiek, Stephan
- Venue
- eLife
- Publisher
- eLife Sciences Publications, Ltd
- Published
- 2026-01-19
- Volume
- 14
- ISSN
- 2050-084X (ISSN-L)
- OpenAlex
- W4404087773
- Cited by
- 0
- References
- 3
- FWCI
- 0.00
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Licence
- Locations
- eLife (publishedVersion, cc-by)
- bioRxiv (Cold Spring Harbor Laboratory) (acceptedVersion, cc-by-nc-nd)
- Funders
- Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung (31-201270, IZLIZ3-200298, 31-197779, 31-185127)
- Fellowship for Excellence by the Biozentrum Basel International PhD Program
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Receptor Mechanisms and Signaling
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cell Biology › Cellular transport and secretion
- Health Sciences › Medicine › Oncology › Chemokine receptors and signaling
- Keywords
- arrestin-2, CCR5, chemokine receptor 5, clathrin-mediated endocytosis, AP-2, receptor phosphorylation, G protein-coupled receptor internalization, solution NMR
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review