Arighi, Cecilia N

UniProt: the Universal Protein Knowledgebase in 2023

The UniProt Consortium, Bateman, A., Martin, M.-J., Orchard, S., Magrane, M., Ahmad, S., Alpi, E., Bowler-Barnett, E. H., Britto, R., Bye-A-Jee, H., et al. (2023) · Nucleic Acids Research

Genomics and Phylogenetic StudiesBioinformatics and Genomic Networks

Cited by 7,210

UniProt: the universal protein knowledgebase in 2021

The UniProt Consortium, Bateman, A., Martin, M.-J., Orchard, S., Magrane, M., Agivetova, R., Ahmad, S., Alpi, E., Bowler-Barnett, E. H., Britto, R., et al. (2021) · Nucleic Acids Research

Genomics and Phylogenetic StudiesBiomedical Text Mining and Ontologies

Cited by 6,372

The Gene Ontology resource: enriching a GOld mine

The Gene Ontology Consortium, Carbon, S., Douglass, E., Good, B. M., Unni, D. R., Harris, N. L., Mungall, C. J., Basu, S., Chisholm, R. L., Dodson, R. J., et al. (2021) · Nucleic Acids Research

Biomedical Text Mining and OntologiesBioinformatics and Genomic Networks

Cited by 3,555

UniProt: the Universal Protein Knowledgebase in 2025

The UniProt Consortium, Bateman, A., Martin, M.-J., Orchard, S., Magrane, M., Adesina, A., Ahmad, S., Bowler-Barnett, E. H., Bye-A-Jee, H., Carpentier, D., et al. (2025) · Nucleic Acids Research

Genomics and Phylogenetic StudiesBioinformatics and Genomic Networks

Cited by 2,537

Annotation of biologically relevant ligands in UniProtKB using ChEBI

Coudert, E., Gehant, S., de Castro, E., Pozzato, M., Baratin, D., Neto, T., Sigrist, C. J. A., Redaschi, N., Bridge, A., The UniProt Consortium, et al. (2023) · Bioinformatics

Biomedical Text Mining and OntologiesBioinformatics and Genomic Networks

Cited by 350

On expert curation and scalability: UniProtKB/Swiss-Prot as a case study

Poux, S., Arighi, C. N., Magrane, M., Bateman, A., Wei, C.-H., Lu, Z., Boutet, E., Bye-A-Jee, H., Famiglietti, M. L., Roechert, B., et al. (2017) · Bioinformatics

Biomedical Text Mining and OntologiesBioinformatics and Genomic Networks

Cited by 135

miRTex: A Text Mining System for miRNA-Gene Relation Extraction

Li, G., Ross, K. E., Arighi, C. N., Peng, Y., Wu, C. H., & Vijay-Shanker, K. (2015) · PLOS Computational Biology

Biomedical Text Mining and OntologiesMicroRNA in disease regulation

Cited by 61

Pressing needs of biomedical text mining in biocuration and beyond: opportunities and challenges

Singhal, A., Leaman, R., Catlett, N., Lemberger, T., McEntyre, J., Polson, S., Xenarios, I., Arighi, C., & Lu, Z. (2016) · Database

Biomedical Text Mining and OntologiesBioinformatics and Genomic Networks

Cited by 48

FAIR adoption, assessment and challenges at UniProt

Garcia, L., Bolleman, J., Gehant, S., Redaschi, N., Martin, M., UniProt Consortium, Bateman, A., Magrane, M., Martin, M., Orchard, S., et al. (2019) · Scientific Data

Research Data Management PracticesScientific Computing and Data Management

Cited by 20

emiRIT: a text-mining-based resource for microRNA information

Roychowdhury, D., Gupta, S., Qin, X., Arighi, C. N., & Vijay-Shanker, K. (2021) · Database

Biomedical Text Mining and OntologiesMicroRNA in disease regulation

Cited by 15