Erhard, Florian

SARS-CoV-2 infection triggers profibrotic macrophage responses and lung fibrosis

Wendisch, D., Dietrich, O., Mari, T., von Stillfried, S., Ibarra, I. L., Mittermaier, M., Mache, C., Chua, R. L., Knoll, R., Timm, S., et al. (2021) · Cell

COVID-19 Clinical Research StudiesInterstitial Lung Diseases and Idiopathic Pulmonary Fibrosis

Cited by 528

Widespread disruption of host transcription termination in HSV-1 infection

Rutkowski, A. J., Erhard, F., L’Hernault, A., Bonfert, T., Schilhabel, M., Crump, C., Rosenstiel, P., Efstathiou, S., Zimmer, R., Friedel, C. C., et al. (2015) · Nature Communications

Herpesvirus Infections and TreatmentsRNA Research and Splicing

Cited by 275

HLA Ligand Atlas: a benign reference of HLA-presented peptides to improve T-cell-based cancer immunotherapy

Marcu, A., Bichmann, L., Kuchenbecker, L., Kowalewski, D. J., Freudenmann, L. K., Backert, L., Mühlenbruch, L., Szolek, A., Lübke, M., Wagner, P., et al. (2021) · Journal for ImmunoTherapy of Cancer

vaccines and immunoinformatics approachesImmunotherapy and Immune Responses

Cited by 250

scSLAM-seq reveals core features of transcription dynamics in single cells

Erhard, F., Baptista, M. A. P., Krammer, T., Hennig, T., Lange, M., Arampatzi, P., Jürges, C. S., Theis, F. J., Saliba, A.-E., & Dölken, L. (2019) · Nature

Single-cell and spatial transcriptomicsGene Regulatory Network Analysis

Cited by 233

HSV-1-induced disruption of transcription termination resembles a cellular stress response but selectively increases chromatin accessibility downstream of genes

Hennig, T., Michalski, M., Rutkowski, A. J., Djakovic, L., Whisnant, A. W., Friedl, M.-S., Jha, B. A., Baptista, M. A. P., L’Hernault, A., Erhard, F., et al. (2018) · PLOS Pathogens

Genomics and Chromatin DynamicsHerpesvirus Infections and Treatments

Cited by 95

Time-resolved single-cell RNA-seq using metabolic RNA labelling

Erhard, F., Saliba, A.-E., Lusser, A., Toussaint, C., Hennig, T., Prusty, B. K., Kirschenbaum, D., Abadie, K., Miska, E. A., Friedel, C. C., et al. (2022) · Nature Reviews Methods Primers

Single-cell and spatial transcriptomicsGenomics and Phylogenetic Studies

Cited by 73

The translational landscape of HIV-1 infected cells reveals key gene regulatory principles

Kibe, A., Buck, S., Gribling-Burrer, A.-S., Gilmer, O., Bohn, P., Koch, T., Mireisz, C. N.-M., Schlosser, A., Erhard, F., Smyth, R. P., et al. (2025) · Nature Structural & Molecular Biology

RNA and protein synthesis mechanismsHIV Research and Treatment

Cited by 19