Marzella, Dario F.

DeepRank: a deep learning framework for data mining 3D protein-protein interfaces

Renaud, N., Geng, C., Georgievska, S., Ambrosetti, F., Ridder, L., Marzella, D. F., Réau, M. F., Bonvin, A. M. J. J., & Xue, L. C. (2021) · Nature Communications

Protein Structure and DynamicsMachine Learning in Bioinformatics

Cited by 125

Improving generalizability and data efficiency for MHC-I binding peptide predictions through structure-based geometric deep learning

Xue, L., Marzella, D., Crocioni, G., Radusinović, T., Lepikhov, D., Severin, H., Bodor, D., Rademaker, D., Lin, C., Georgievska, S., et al. (2024) · Communications Biology

vaccines and immunoinformatics approachesMachine Learning in Bioinformatics

Cited by 18

PANDORA v2.0: Benchmarking peptide-MHC II models and software improvements

Parizi, F. M., Marzella, D. F., Ramakrishnan, G., ‘t Hoen, P. A. C., Karimi-Jafari, M. H., & Xue, L. C. (2023) · Frontiers in Immunology

vaccines and immunoinformatics approachesProtein Structure and Dynamics

Cited by 14