Wallner, Björn

DockQ: A Quality Measure for Protein-Protein Docking Models

Basu, S., & Wallner, B. (2016) · PLOS ONE

Protein Structure and DynamicsEnzyme Structure and Function

Cited by 460

Critical assessment of protein intrinsic disorder prediction

Necci, M., Piovesan, D., Predictors, C., Hoque, M. T., Walsh, I., Iqbal, S., Vendruscolo, M., Sormanni, P., Wang, C., Raimondi, D., et al. (2021) · Nature Methods

Protein Structure and DynamicsMachine Learning in Bioinformatics

Cited by 343

AFsample: improving multimer prediction with AlphaFold using massive sampling

Wallner, B. (2023) · Bioinformatics

Protein Structure and DynamicsEnzyme Structure and Function

Cited by 164

Improving Peptide-Protein Docking with AlphaFold-Multimer using Forced Sampling

Johansson-Åkhe, I., & Wallner, B. (2021) · Frontiers in Bioinformatics

Protein Structure and DynamicsComputational Drug Discovery Methods

Cited by 162

Improving peptide-protein docking with AlphaFold-Multimer using forced sampling

Johansson-Åkhe, I., & Wallner, B. (2022) · Frontiers in Bioinformatics

Protein Structure and DynamicsComputational Drug Discovery Methods

Cited by 162

rawMSA: End-to-end Deep Learning using raw Multiple Sequence Alignments

Mirabello, C., & Wallner, B. (2019) · PLOS ONE

Protein Structure and DynamicsMachine Learning in Bioinformatics

Cited by 105

Improved Multimer Prediction using Massive Sampling with AlphaFold in CASP15

Wallner, B. (2023) · Proteins Structure Function and Bioinformatics

Protein Structure and DynamicsEnzyme Structure and Function

Cited by 53

Improved multimer prediction using massive sampling with AlphaFold in CASP15

Wallner, B. (2023) · Proteins: Structure, Function, and Bioinformatics

Protein Structure and DynamicsEnzyme Structure and Function

Cited by 53

MassiveFold: unveiling AlphaFold’s hidden potential with optimized and parallelized massive sampling

Raouraoua, N., Mirabello, C., Véry, T., Blanchet, C., Wallner, B., Lensink, M. F., & Brysbaert, G. (2024) · Nature Computational Science

Protein Structure and DynamicsMachine Learning in Bioinformatics

Cited by 51

InterPepScore: a deep learning score for improving the FlexPepDock refinement protocol

Johansson-Åkhe, I., & Wallner, B. (2022) · Bioinformatics

Protein Structure and DynamicsComputational Drug Discovery Methods

Cited by 6