Yooseph, Shibu

The sequence of the human genome

Venter, J. C., Adams, M. D., Myers, E. W., Li, P. W., Mural, R. J., Sutton, G. G., Smith, H. O., Yandell, M., Evans, C. A., Holt, R. A., et al. (2001) · Science

Genomics and Phylogenetic StudiesGenomic variations and chromosomal abnormalities

Cited by 13,909

Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea

The Genome Standards Consortium, Bowers, R. M., Kyrpides, N. C., Stepanauskas, R., Harmon-Smith, M., Doud, D., Reddy, T. B. K., Schulz, F., Jarett, J., Rivers, A. R., et al. (2017) · Nature Biotechnology

Genomics and Phylogenetic StudiesResearch Data Management Practices

Cited by 2,624

Gut Microbiome-Based Metagenomic Signature for Non-invasive Detection of Advanced Fibrosis in Human Nonalcoholic Fatty Liver Disease

Loomba, R., Seguritan, V., Li, W., Long, T., Klitgord, N., Bhatt, A., Dulai, P. S., Caussy, C., Bettencourt, R., Highlander, S. K., et al. (2017) · Cell Metabolism

Gut microbiota and healthLiver Disease Diagnosis and Treatment

Cited by 1,123

Diet and feeding pattern affect the diurnal dynamics of the gut microbiome

Zarrinpar, A., Chaix, A., Yooseph, S., & Panda, S. (2014) · Cell Metabolism

Gut microbiota and healthDietary Effects on Health

Cited by 926

Essential genes of a minimal bacterium

Glass, J. I., Assad-Garcia, N., Alperovich, N., Yooseph, S., Lewis, M. R., Maruf, M., Hutchison, C. A., Smith, H. O., & Venter, J. C. (2006) · Proceedings of the National Academy of Sciences

Bacterial Genetics and BiotechnologyMicrobial infections and disease research

Cited by 912

Gut microbiota dependent anti-tumor immunity restricts melanoma growth in Rnf5−/− mice

Li, Y., Tinoco, R., Elmén, L., Segota, I., Xian, Y., Fujita, Y., Sahu, A., Zarecki, R., Marie, K., Feng, Y., et al. (2019) · Nature Communications

Gut microbiota and healthCancer Immunotherapy and Biomarkers

Cited by 212

Using DGGE profiling to develop a novel culture medium suitable for oral microbial communities: DGGE profiling for culture medium development

Tian, Y., He, X., Torralba, M., Yooseph, S., Nelson, K. E., Lux, R., McLean, J. S., Yu, G., & Shi, W. (2010) · Molecular Oral Microbiology

Oral microbiology and periodontitis researchMicrobial Community Ecology and Physiology

Cited by 133

Differences in the nasopharyngeal microbiome during acute respiratory tract infection with human rhinovirus and respiratory syncytial virus in infancy

Rosas-Salazar, C., Shilts, M. H., Tovchigrechko, A., Schobel, S., Chappell, J. D., Larkin, E. K., Shankar, J., Yooseph, S., Nelson, K. E., Halpin, R. A., et al. (2016) · Journal of Infectious Diseases

Respiratory viral infections researchGut microbiota and health

Cited by 102

Meta-omics uncover temporal regulation of pathways across oral microbiome genera during in vitro sugar metabolism

Edlund, A., Yang, Y., Yooseph, S., Hall, A. P., Nguyen, D. D., Dorrestein, P. C., Nelson, K. E., He, X., Lux, R., Shi, W., et al. (2015) · The ISME Journal

Oral microbiology and periodontitis researchGut microbiota and health

Cited by 84

Uncovering complex microbiome activities via metatranscriptomics during 24 hours of oral biofilm assembly and maturation

Edlund, A., Yang, Y., Yooseph, S., He, X., Shi, W., & McLean, J. S. (2018) · Microbiome

Oral microbiology and periodontitis researchBacterial biofilms and quorum sensing

Cited by 57