Smith, Jeremy C.

‘GROMACS: High performance molecular simulations through multi-level parallelism from laptops to supercomputers’

Abraham, M. J., Murtola, T., Schulz, R., Páll, S., Smith, J. C., Hess, B., & Lindahl, E. (2015) · SoftwareX

Parallel Computing and Optimization TechniquesProtein Structure and Dynamics

Cited by 27,190

Membrane Protein Structure, Function, and Dynamics: a Perspective from Experiments and Theory

Cournia, Z., Allen, T. W., Andricioaei, I., Antonny, B., Baum, D., Brannigan, G., Buchete, N.-V., Deckman, J. T., Delemotte, L., del Val, C., et al. (2015) · The Journal of Membrane Biology

Lipid Membrane Structure and BehaviorProtein Structure and Dynamics

Cited by 235

Molecular-level driving forces in lignocellulosic biomass deconstruction for bioenergy

Petridis, L., & Smith, J. C. (2018) · Nature Reviews Chemistry

Biofuel production and bioconversionCatalysis for Biomass Conversion

Cited by 228

Dynamical fingerprints for probing individual relaxation processes in biomolecular dynamics with simulations and kinetic experiments

Noé, F., Doose, S., Daidone, I., Löllmann, M., Sauer, M., Chodera, J. D., & Smith, J. C. (2011) · Proceedings of the National Academy of Sciences

Protein Structure and DynamicsAdvanced Fluorescence Microscopy Techniques

Cited by 116

Optimal use of data in parallel tempering simulations for the construction of discrete-state Markov models of biomolecular dynamics

Prinz, J.-H., Chodera, J. D., Pande, V. S., Swope, W. C., Smith, J. C., & Noé, F. (2011) · The Journal of Chemical Physics

Protein Structure and DynamicsAdvanced Physical and Chemical Molecular Interactions

Cited by 52

Dynamic neutron scattering from conformational dynamics. I. Theory and Markov models

Lindner, B., Yi, Z., Prinz, J.-H., Smith, J. C., & Noé, F. (2013) · The Journal of Chemical Physics

Protein Structure and DynamicsAdvanced Physical and Chemical Molecular Interactions

Cited by 23

Dynamic neutron scattering from conformational dynamics. II. Application using molecular dynamics simulation and Markov modeling

Yi, Z., Lindner, B., Prinz, J.-H., Noé, F., & Smith, J. C. (2013) · The Journal of Chemical Physics

Protein Structure and DynamicsAdvanced Physical and Chemical Molecular Interactions

Cited by 14

Osteocalcin binds to a GPRC6A Venus fly trap allosteric site to positively modulate GPRC6A signaling

Agarwal, R., Pi, M., Ye, R., Smith, M. D., Smith, J. C., & Quarles, L. D. (2022) · FASEB BioAdvances

Receptor Mechanisms and SignalingProtein Kinase Regulation and GTPase Signaling

Cited by 3

Osteocalcin binds to a GPRC6A Venus fly trap allosteric site to positively modulate GPRC6A signaling

Agarwal, R., Ye, R., Smith, M. D., Smith, J. C., Quarles, L. D., & Pi, M. (2024) · FASEB BioAdvances

Receptor Mechanisms and SignalingProtein Kinase Regulation and GTPase Signaling

Cited by 3