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Osteocalcin binds to a GPRC6A Venus fly trap allosteric site to positively modulate GPRC6A signaling
Open accessPreprint — published as 10.1096/fba.2024-00025 · Paper page
Abstract
GPRC6A is a member of the Family C G-protein coupled receptors that is activated by cations, L-amino acids, the osteocalcin (Ocn) peptide, and testosterone. GPRC6A functions as a master regulator of energy metabolism and sex hormone production. Based on homology to the related receptors mGluR5 and CaSR, GPRC6A’s multiple ligand specificity is likely based on an orthosteric ligand binding site in the bilobed Venus fly trap (VFT) domain together with two positive allosteric modulator (PAM) sites, one in the VFT and the other in the 7TM domain. Here, we show that Ocn acts as a PAM for GPRC6A by binding to a site in the VFT that is distinct from the orthosteric site for calcium and L-amino acids. In agreement with this finding, alternatively spliced GPRC6A isoforms 2 and 3, which lack regions of the VFT, and mutations in the predicted Ocn binding site, K352E and H355P, prevent Ocn activation of GPRC6A. These observations provide a structural framework for understanding the ability of multiple distinct classes of compounds to activate GPRC6A and set the stage to develop novel small molecules to activate and inhibit this receptor.
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Highly accurate protein structure prediction with AlphaFold
Jumper, J., Evans, R., Pritzel, A., Green, T., Figurnov, M., Ronneberger, O., Tunyasuvunakool, K., Bates, R., Žídek, A., Potapenko, A., et al. (2021) · Nature · doi:10.1038/s41586-021-03819-2 · Cited by 43,764
Flagged first, then by citations
Research works printed but not linked: 44
- 10.1016/j.cell.2007.05.047 · DOI · Paper page
- 10.1016/j.cell.2011.02.004 · DOI · Paper page
- Pi, M. , Nishimoto, S. K. , and Darryl Quarles, L. (2021) Explaining Divergent Observations Regarding Osteocalcin/GPRC6A Endocrine Signaling. Endocrinology 162 · DOI · Paper page
- 2017, GPRC6A: Jack of all metabolism (or master of none), Mol Metab, 6, 185, 10.1016/j.molmet.2016.12.006 · DOI
- 10.1002/jbmr.390 · DOI
- 2020, Role of GPRC6A in Regulating Hepatic Energy Metabolism in Mice, Sci Rep, 10, 7216, 10.1038/s41598-020-64384-8 · DOI
- 2016, Osteocalcin is necessary and sufficient to maintain muscle mass in older mice, Mol Metab, 5, 1042, 10.1016/j.molmet.2016.07.002 · DOI · Paper page
- Mukai, S. , Mizokami, A. , Otani, T. , Sano, T. , Matsuda, M. , Chishaki, S. , Gao, J. , Kawakubo-Yasukochi, T. , Tang, R. , Kanematsu, T. , Takeuchi, H. , Jimi, E. , and Hirata, M. (2021) Adipocyte-specific GPRC6A ablation promotes diet-induced obesity by inhibiting lipolysis. J Biol Chem 296, 100274 · DOI
- 2020, GLP-1 signaling is required for improvement of glucose tolerance by osteocalcin, J Endocrinol, 244, 285, 10.1530/JOE-19-0288 · DOI
- 10.1016/j.bone.2014.09.006 · DOI
- 10.1210/en.2015-2010 · DOI
- 2018, Computationally identified novel agonists for GPRC6A, PLoS One, 13, e0195980, 10.1371/journal.pone.0195980 · DOI
- 10.1210/me.2015-1161 · DOI
- 2018, GPCR6A Is a Molecular Target for the Natural Products Gallate and EGCG in Green Tea, Mol Nutr Food Res, 62, e1700770, 10.1002/mnfr.201700770 · DOI
- 10.1016/S0163-7258(03)00038-X · DOI · Paper page
- 10.1038/s41586-019-0881-4 · DOI
- Chen, X. , Wang, L. , Cui, Q. , Ding, Z. , Han, L. , Kou, Y. , Zhang, W. , Wang, H. , Jia, X. , Dai, M. , Shi, Z. , Li, Y. , Li, X. , and Geng, Y. (2021) Structural insights into the activation of human calcium-sensing receptor. Elife 10 · DOI
- Park, J. , Zuo, H. , Frangaj, A. , Fu, Z. , Yen, L. Y. , Zhang, Z. , Mosyak, L. , Slavkovich, V. N. , Liu, J. , Ray, K. M. , Cao, B. , Vallese, F. , Geng, Y. , Chen, S. , Grassucci, R. , Dandey, V. P. , Tan, Y. Z. , Eng, E. , Lee, Y. , Kloss, B. , Liu, Z. , Hendrickson, W. A. , Potter, C. S. , Carragher, B. , Graziano, J. , Conigrave, A. D. , Frank, J. , Clarke, O. B. , and Fan, Q. R. (2021) Symmetric activation and modulation of the human calcium-sensing receptor. Proc Natl Acad Sci U S A 118 · DOI
- Wen, T. , Wang, Z. , Chen, X. , Ren, Y. , Lu, X. , Xing, Y. , Lu, J. , Chang, S. , Zhang, X. , Shen, Y. , and Yang, X. (2021) Structural basis for activation and allosteric modulation of full-length calcium-sensing receptor. Sci Adv 7 · DOI
- 2021, Asymmetric activation of the calcium-sensing receptor homodimer, Nature, 595, 455, 10.1038/s41586-021-03691-0 · DOI
- 10.1016/j.gene.2004.03.003 · DOI
- 2022, Protein structure predictions to atomic accuracy with AlphaFold, Nat Methods, 19, 11, 10.1038/s41592-021-01362-6 · DOI · Paper page
- 10.1093/NAR/GKAB1061 · DOI · Paper page
- 2021, AlphaFold 2: Why It Works and Its Implications for Understanding the Relationships of Protein Sequence, Structure, and Function, J Chem Inf Model, 61, 4827, 10.1021/acs.jcim.1c01114 · DOI · Paper page
- 10.1359/jbmr.1997.12.3.447 · DOI
- 10.3945/jn.109.115329 · DOI
- 10.1021/ja026939x · DOI · Paper page
- 2016, Murine GPRC6A Mediates Cellular Responses to L-Amino Acids, but Not Osteocalcin Variants, PLoS One, 11, e0146846, 10.1371/journal.pone.0146846 · DOI
- 10.3109/10408369109106867 · DOI
- 2020, Newly identified peptide hormone inhibits intestinal fat absorption and improves NAFLD through its receptor GPRC6A, J Hepatol, 73, 383, 10.1016/j.jhep.2020.02.026 · DOI
- 2021, Structure of the class C orphan GPCR GPR158 in complex with RGS7-Gbeta5, Nat Commun, 12, 6805, 10.1038/s41467-021-27147-1 · DOI
- Varadi, M. , European Molecular Biology Laboratory, E. B. I., Hinxton, UK, Anyango, S. , European Molecular Biology Laboratory, E. B. I., Hinxton, UK, Deshpande, M. , European Molecular Biology Laboratory, E. B. I., Hinxton, UK, Nair, S. , European Molecular Biology Laboratory, E. B. I., Hinxton, UK, Natassia, C. , European Molecular Biology Laboratory, E. B. I., Hinxton, UK, Yordanova, G. , European Molecular Biology Laboratory, E. B. I., Hinxton, UK, Yuan, D. , European Molecular Biology Laboratory, E. B. I., Hinxton, UK, Stroe, O. , European Molecular Biology Laboratory, E. B. I., Hinxton, UK, Wood, G. , European Molecular Biology Laboratory, E. B. I., Hinxton, UK, Laydon, A. , DeepMind, L., UK, Žídek, A. , DeepMind, L., UK, Green, T. , DeepMind, L., UK, Tunyasuvunakool, K. , DeepMind, L., UK, Petersen, S. , DeepMind, L., UK, Jumper, J. , DeepMind, L., UK, Clancy, E. , DeepMind, L., UK, Green, R. , DeepMind, L., UK, Vora, A. , DeepMind, L., UK, Lutfi, M. , DeepMind, L., UK, Figurnov, M. , DeepMind, L., UK, Cowie, A. , DeepMind, L., UK, Hobbs, N. , DeepMind, L., UK, Kohli, P. , DeepMind, L., UK, Kleywegt, G. , European Molecular Biology Laboratory, E. B. I., Hinxton, UK, Birney, E. , European Molecular Biology Laboratory, E. B. I., Hinxton, UK, Hassabis, D. , DeepMind, L., UK, Velankar, S. , and European Molecular Biology Laboratory, E. B. I., Hinxton, UK. (2022) AlphaFold Protein Structure Database: massively expanding the structural coverage of protein-sequence space with high-accuracy models. Nucleic Acids Research 50 · DOI · Paper page
- 10.1002/jcc.20290 · DOI · Paper page
- 10.1063/1.464397 · DOI
- 10.1063/1.1808117 · DOI
- 10.1002/jcc.540130805 · DOI
- 1973, Nonlinear generalized Langevin equations, Journal of Statistical Physics, 9, 215, 10.1007/BF01008729 · DOI
- 10.1016/j.cplett.2003.12.039 · DOI
- 1979, Proof that the gamma-carboxyglutamic acid-containing bone protein is synthesized in calf bone. Comparative synthesis rate and effect of coumadin on synthesis, J Biol Chem, 254, 437, 10.1016/S0021-9258(17)37936-X · DOI
- 10.1210/EN.2015-1143 · DOI · Paper page
- 10.1016/0003-2697(90)90079-O · DOI
- 1985, The vitamin K-dependent bone protein is accumulated within cultured osteosarcoma cells in the presence of the vitamin K antagonist warfarin, J Biol Chem, 260, 2832, 10.1016/S0021-9258(18)89439-X · DOI
- 10.1074/jbc.M110.158063 · DOI · Paper page
- 10.1371/journal.pone.0003858 · DOI
Metadata
- Authors
- Agarwal, R., Pi, M., Ye, R., Smith, M. D., Smith, J. C., & Quarles, L. D.
- Affiliations
- Oak Ridge National Laboratory (US)
- University of Tennessee Health Science Center (US)
- Corresponding author
- Pi, Min
- Smith, Jeremy C.
- Quarles, L. Darryl
- Venue
- FASEB BioAdvances
- Publisher
- openRxiv
- Published
- 2022-02-15
- Volume
- 6
- Issue
- 9
- Pages
- 365-376
- ISSN
- 2573-9832 (ISSN-L)
- PMC
- PMC11467737
- OpenAlex
- W4401591301
- Cited by
- 3
- References
- 1
- Citations by year
- 2026: 1 · 2025: 1 · 2024: 1
- FWCI
- 0.41
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Licence
- cc-by
- Locations
- FASEB BioAdvances (publishedVersion, cc-by)
- bioRxiv (Cold Spring Harbor Laboratory) (acceptedVersion, cc-by-nc-nd)
- PubMed Central (publishedVersion, cc-by)
- PubMed (publishedVersion)
- OSTI OAI (U.S. Department of Energy Office of Scientific and Technical Information) (submittedVersion)
- DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion)
- Funders
- National Institutes of Health
- National Institute of Diabetes and Digestive and Kidney Diseases (R01DK120567, R01DK121132)
- National Institute of Arthritis and Musculoskeletal and Skin Diseases (R01AR071930)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Receptor Mechanisms and Signaling
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Protein Kinase Regulation and GTPase Signaling
- Life Sciences › Neuroscience › Cellular and Molecular Neuroscience › Neuropeptides and Animal Physiology
- Keywords
- GPRC6A, osteocalcin, positive allosteric modulators, G protein-coupled receptor signaling, ligand binding sites, orthosteric binding site, alternative splicing, receptor activation, energy metabolism
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