Farlik, Matthias

Specification of tissue-resident macrophages during organogenesis

Mass, E., Ballesteros, I., Farlik, M., Halbritter, F., Günther, P., Crozet, L., Jacome-Galarza, C. E., Händler, K., Klughammer, J., Kobayashi, Y., et al. (2016) · Science

Phagocytosis and Immune RegulationImmune cells in cancer

Cited by 891

Spatiotemporal structure of cell fate decisions in murine neural crest

Soldatov, R., Kaucka, M., Kastriti, M. E., Petersen, J., Chontorotzea, T., Englmaier, L., Akkuratova, N., Yang, Y., Häring, M., Dyachuk, V., et al. (2019) · Science

Developmental Biology and Gene RegulationSingle-cell and spatial transcriptomics

Cited by 546

Molecular interrogation of hypothalamic organization reveals distinct dopamine neuronal subtypes

Romanov, R. A., Zeisel, A., Bakker, J., Girach, F., Hellysaz, A., Tomer, R., Alpár, A., Mulder, J., Clotman, F., Keimpema, E., et al. (2017) · Nature Neuroscience

Single-cell and spatial transcriptomicsCircadian rhythm and melatonin

Cited by 502

Single-cell DNA methylome sequencing and bioinformatic inference of epigenomic cell-state dynamics

Farlik, M., Sheffield, N. C., Nuzzo, A., Datlinger, P., Schönegger, A., Klughammer, J., & Bock, C. (2015) · Cell Reports

Epigenetics and DNA MethylationSingle-cell and spatial transcriptomics

Cited by 422

Soluble TREM2 levels reflect the recruitment and expansion of TREM2+ macrophages that localize to fibrotic areas and limit NASH

Hendrikx, T., Porsch, F., Kiss, M. G., Rajcic, D., Papac-Miličević, N., Hoebinger, C., Goederle, L., Hladik, A., Shaw, L. E., Horstmann, H., et al. (2022) · Journal of Hepatology

Liver Disease Diagnosis and TreatmentLiver physiology and pathology

Cited by 220

SARS-CoV-2 mutations in MHC-I-restricted epitopes evade CD8 + T cell responses

Agerer, B., Koblischke, M., Gudipati, V., Montaño-Gutierrez, L. F., Smyth, M., Popa, A., Genger, J.-W., Endler, L., Florian, D. M., Mühlgrabner, V., et al. (2021) · Science Immunology

vaccines and immunoinformatics approachesSARS-CoV-2 and COVID-19 Research

Cited by 172

Comprehensive genome and epigenome characterization of CHO cells in response to evolutionary pressures and over time

Feichtinger, J., Hernández, I., Fischer, C., Hanscho, M., Auer, N., Hackl, M., Jadhav, V., Baumann, M., Krempl, P. M., Schmidl, C., et al. (2016) · Biotechnology and Bioengineering

Viral Infectious Diseases and Gene Expression in InsectsEpigenetics and DNA Methylation

Cited by 148

Chromatin accessibility maps of chronic lymphocytic leukaemia identify subtype-specific epigenome signatures and transcription regulatory networks

Rendeiro, A. F., Schmidl, C., Strefford, J. C., Walewska, R., Davis, Z., Farlik, M., Oscier, D., & Bock, C. (2016) · Nature Communications

Chronic Lymphocytic Leukemia ResearchGenomics and Chromatin Dynamics

Cited by 146

Multi-omics of single cells: strategies and applications

Bock, C., Farlik, M., & Sheffield, N. C. (2016) · Trends in Biotechnology

Single-cell and spatial transcriptomicsBioinformatics and Genomic Networks

Cited by 146